Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899871
Identifier: 159899871
GI number: 159899871
Start: 4231317
End: 4232546
Strand: Direct
Name: 159899871
Synonym: Haur_3354
Alternate gene names: NA
Gene position: 4231317-4232546 (Clockwise)
Preceding gene: 159899870
Following gene: 159899872
Centisome position: 66.67
GC content: 53.09
Gene sequence:
>1230_bases ATGCGGCGGGTCGTTTTTCTGATCACGATGGGTATTGAACGACCTTCGGGTCAGCGCTACTTTAATCTGGCCAAGGAATT GGTGCGCCAAGGCGATCAGGTACGCATCTTGGCCTTGCACCCCGATTTAGAACAATGTCAACAACGCCGCTTTGTGCAGG ATGGAGTTGAAATTTGGTATGTTGGCCAGATGCACTCGCGCAAACGCCATGGCGAGGTACTGCCATTTTCACCCTTGCAG TTGCTAGCGGTCTTGATTCGTGCCACATTAGGCATGCTGTGGGCCATTCTCTGCTCGCCCGCTGAGATTTACCACCTTGG CAAACCACAACCTGTCAATGGTTTGGCGGCGATTTTGGGGGTGTTGTTGGGGCGTGGTCAACGCTTTTGGGTCGATTGCG ACGATGATGAAGTTGGTAGCAATCGCCTGACCAACCAAGCGCAGCGTATGGTGTTTGGCTTTTGGCAATGGCTCTTGCCG CGTTTAGCCCAAGGCGTAACCGTCAATACCCAAGCCTTAGCGGCGCGAATGCTTGCTGCGCGGGTTGCCAACATTGTCTA TGTGCCCAACGGCGTTGATTTGAGCTTGTTCCAAGCGCCAGAGCCAGCAGTTTTGGCAGGCTTGCGCACAAGTTTAGGTT TGGATGGAATGCAGGTGATCGCCTATGTTGGCACAATCGCCCTGCACAACCACCCAATCAACCTTTTGCTCGAAGCCTTT GATCAACAATTAAAGCATGATCCTCTGATTCGACTGGTGCTCGTTGGTGGCGGCGAAGATCTGGGTTATGTTCAAACTTG GATTCGCGACCATGGCTACCACGATCGCATCTTCTGTCTTGGGCATCAAGATCGGCGCAGCATTCCCATGTGGATGGCGC TTGCCAATGTGACGGTTGATCCAGTGTATGATGATATGGTGGCACAAGCCCGTTCGCCCTTGAAGCTGTTTGAAAGCTTG GCCTTGGGAATTCCCCCAGTTACTGGCGATGTTGGCGATCGGCGGCTTGTCTTGAATTTTGCTGCTGATCGGTTGATCGC TCCGGCTGGTGATGCATTGGCGTTAGCTCAAACCCTGCAAGCTGTGCTAGCAACCTGGAGTACAACTAATCGCCAAGCCT GCTTTGAACGAGCGACTGACTATGCATGGTCGGCGTTGGCGCTACGTTGGCGAGCAGGCTACGAGGAATCTTATGCGAAC CAGGCACTTGACTCAACCTCAACCAAATAG
Upstream 100 bases:
>100_bases TAAAAGCCCCGATGACTGCCGCCGTCCACGCTGAACGCGGCCAACAATTGCATGGCTGGGAACATCTGATCAATTGCCTT GAACGAATTGGGGCCAAATA
Downstream 100 bases:
>100_bases CGAGTTTGGCAATGATTAAGGAATCTACGCCAACGCAAGCCAGTGTGGCCGAAGCCCCTGCCCCTGCCAAATTGCCACGC GCTCGGCTTTTTCAGATCAG
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: Glycosyl Transferase Group 1 Family Protein
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MRRVVFLITMGIERPSGQRYFNLAKELVRQGDQVRILALHPDLEQCQQRRFVQDGVEIWYVGQMHSRKRHGEVLPFSPLQ LLAVLIRATLGMLWAILCSPAEIYHLGKPQPVNGLAAILGVLLGRGQRFWVDCDDDEVGSNRLTNQAQRMVFGFWQWLLP RLAQGVTVNTQALAARMLAARVANIVYVPNGVDLSLFQAPEPAVLAGLRTSLGLDGMQVIAYVGTIALHNHPINLLLEAF DQQLKHDPLIRLVLVGGGEDLGYVQTWIRDHGYHDRIFCLGHQDRRSIPMWMALANVTVDPVYDDMVAQARSPLKLFESL ALGIPPVTGDVGDRRLVLNFAADRLIAPAGDALALAQTLQAVLATWSTTNRQACFERATDYAWSALALRWRAGYEESYAN QALDSTSTK
Sequences:
>Translated_409_residues MRRVVFLITMGIERPSGQRYFNLAKELVRQGDQVRILALHPDLEQCQQRRFVQDGVEIWYVGQMHSRKRHGEVLPFSPLQ LLAVLIRATLGMLWAILCSPAEIYHLGKPQPVNGLAAILGVLLGRGQRFWVDCDDDEVGSNRLTNQAQRMVFGFWQWLLP RLAQGVTVNTQALAARMLAARVANIVYVPNGVDLSLFQAPEPAVLAGLRTSLGLDGMQVIAYVGTIALHNHPINLLLEAF DQQLKHDPLIRLVLVGGGEDLGYVQTWIRDHGYHDRIFCLGHQDRRSIPMWMALANVTVDPVYDDMVAQARSPLKLFESL ALGIPPVTGDVGDRRLVLNFAADRLIAPAGDALALAQTLQAVLATWSTTNRQACFERATDYAWSALALRWRAGYEESYAN QALDSTSTK >Mature_409_residues MRRVVFLITMGIERPSGQRYFNLAKELVRQGDQVRILALHPDLEQCQQRRFVQDGVEIWYVGQMHSRKRHGEVLPFSPLQ LLAVLIRATLGMLWAILCSPAEIYHLGKPQPVNGLAAILGVLLGRGQRFWVDCDDDEVGSNRLTNQAQRMVFGFWQWLLP RLAQGVTVNTQALAARMLAARVANIVYVPNGVDLSLFQAPEPAVLAGLRTSLGLDGMQVIAYVGTIALHNHPINLLLEAF DQQLKHDPLIRLVLVGGGEDLGYVQTWIRDHGYHDRIFCLGHQDRRSIPMWMALANVTVDPVYDDMVAQARSPLKLFESL ALGIPPVTGDVGDRRLVLNFAADRLIAPAGDALALAQTLQAVLATWSTTNRQACFERATDYAWSALALRWRAGYEESYAN QALDSTSTK
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45578; Mature: 45578
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRVVFLITMGIERPSGQRYFNLAKELVRQGDQVRILALHPDLEQCQQRRFVQDGVEIWY CCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCEEEE VGQMHSRKRHGEVLPFSPLQLLAVLIRATLGMLWAILCSPAEIYHLGKPQPVNGLAAILG ECCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCCCCHHHHHHHH VLLGRGQRFWVDCDDDEVGSNRLTNQAQRMVFGFWQWLLPRLAQGVTVNTQALAARMLAA HHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH RVANIVYVPNGVDLSLFQAPEPAVLAGLRTSLGLDGMQVIAYVGTIALHNHPINLLLEAF HHHCEEECCCCCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHH DQQLKHDPLIRLVLVGGGEDLGYVQTWIRDHGYHDRIFCLGHQDRRSIPMWMALANVTVD HHHHCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHCCEEC PVYDDMVAQARSPLKLFESLALGIPPVTGDVGDRRLVLNFAADRLIAPAGDALALAQTLQ HHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHCCCCCHHHHHHHHHH AVLATWSTTNRQACFERATDYAWSALALRWRAGYEESYANQALDSTSTK HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC >Mature Secondary Structure MRRVVFLITMGIERPSGQRYFNLAKELVRQGDQVRILALHPDLEQCQQRRFVQDGVEIWY CCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCEEEE VGQMHSRKRHGEVLPFSPLQLLAVLIRATLGMLWAILCSPAEIYHLGKPQPVNGLAAILG ECCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCCCCHHHHHHHH VLLGRGQRFWVDCDDDEVGSNRLTNQAQRMVFGFWQWLLPRLAQGVTVNTQALAARMLAA HHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH RVANIVYVPNGVDLSLFQAPEPAVLAGLRTSLGLDGMQVIAYVGTIALHNHPINLLLEAF HHHCEEECCCCCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHH DQQLKHDPLIRLVLVGGGEDLGYVQTWIRDHGYHDRIFCLGHQDRRSIPMWMALANVTVD HHHHCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHCCEEC PVYDDMVAQARSPLKLFESLALGIPPVTGDVGDRRLVLNFAADRLIAPAGDALALAQTLQ HHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHCCCCCHHHHHHHHHH AVLATWSTTNRQACFERATDYAWSALALRWRAGYEESYANQALDSTSTK HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA