Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159899649

Identifier: 159899649

GI number: 159899649

Start: 3956856

End: 3958646

Strand: Direct

Name: 159899649

Synonym: Haur_3131

Alternate gene names: NA

Gene position: 3956856-3958646 (Clockwise)

Preceding gene: 159899648

Following gene: 159899650

Centisome position: 62.35

GC content: 53.82

Gene sequence:

>1791_bases
ATGCAGCGGTTTCGCCAATCTTCGATCATTCTGCTTCTGACCATGGCTTTGTTGGGCCTTGGCAGCCTGTTGATCGCTCA
GTGGTTACGCCCCGATCGTTCGCCACGCATCTGGACAGGCGGCAATATTTTGGCTAATGCCGATTGGCAGAGCGCCGCCG
ATAACGGGATTCCCGATGGTTGGTCGGGCAATGGCATCAAACGCGCCGATACCACCAATGGCTATGTGCTCGATGATCAA
TATAGCTTGCAGTTGTATGGGGTCAATAGTTTTGCCCGTTCGCCACGCTTAACTGCCCAAGCAGGCCAGCGCTATCGACT
GGGCTTTCAAGCCCTGATCGATCCCGGCACGCAGCGAAGCAGTTTGGGCGCACAAATTCAGGTTTGGGTGCATTGGGTCG
ATACTGCTGGCGATGATATTCGGCTCGATAAGCAAGCTCCAGTTTTGCTGGGCTTCGATAGCCAAGGCGCAGCAACCTGG
ACTCCAGTGTTGGTTGAAACTGAACCCAGCCCCAATCAAGCCGCTTGGCTAGCAATTTCAATCCACGCGCTTTCTGATGA
CCCAATTTATCTTGATAATTTGAGTATGGCAGCGGCTGGCATTTACATCGAACCCTATCCGCAGGGCGCGATTGCTGCTG
TGAGTTTTAGTGTCGATTGGGAAACAGCCATGGGCGGGGCGATTCACTCGCTCAGTTTGTCAACCGATGCGATCAGCAGC
GCCACGACCTTGGGTTTACAAGCTCGCCAAGGCACATACAATTTGCTGGACTTGTTTGCGCCGCATCACATTCGCGGCAC
ATGGTTTGGCAATGGCTATAATTTTTTATTCGGCAACCAAGAGCGCCGCACCTGGATGGACGACCCAACCTTTGCTTGGG
CTGCCAGTACGCCGCGCCGTTGGCAAACCATCGATTGGTCACAAACGCCGTGGTTCAGCCACGATCCCTATGGCACGGTC
GAGAGCGATCCAGCCTGGTATTTTGGCGATTTACTTGAACCGCTACGAAACGCTCAGCAAACGATCGAAAGTCATACATT
TAGCCATATGTACATTGGCTTTGCCCATGCCAAAGAGTTAGCTAGCGATAGCAATGAGTGGCAGGCAGTGACAAGCAGCC
AAGGCATTGCGCCCGCCAGCAGTTTAGCTTTCCCGTATGGCGGCAGCGATGGCATGACCGAAGCCCATTGGCAAACCTTG
CAAGCCGCAGGTATTCGCACCGTCGTGCGCACCCGCGTGCTTGATGCCACCAACGTGCAACGTGGTGTGAATGATCGCCA
TTTGTTGATCGATCGGCGTTGGTGGCAACCGCGCCAATTGCCAGGCCACGATCTGGTTGCCTTGCCCGATGTTTACCTGA
CCCCGCAAACCGCTATGACTGCAACCAATTACTTGCAGCAAGCCATCGCTAGCGGCGGTGTGATCGATATCTATGCCCAT
AATTACGAAATTTACAACCCTGAGCAAATTGGCGTTTGGCAAACGGCAATTCAACAGGCAGTTGAAGCCCAAGCGTGGAT
CGCCACAGTGCCGGAAATTGCCGACCGCTGGCGAGCACGCCAAACGCTCCAACTCACCATCGAACAAACCCCTGATCAAC
TTCGGCTTCAGCTCGCCAATCCCAGTCGTTTCGATTTAGCCCAGCTTAGCTTGCGGCTTCCGGCTGAGAGCACTGGCAGC
GATAAAGGCAATTTTGATCAGGCTAACCATCGGCTGATTCTTGATTTACCAGCAAACTCCGCCGAGGAGATTACGATATG
GCTCAAACCATCAACGCCGCACGTACCATAA

Upstream 100 bases:

>100_bases
TGGCTGAGTAAATCGTCGAAGCCTGATTTTTTGTCAAGCCGCCAGCCCTGTGTTAAAATGCGCTATTGCGTTGAACACGC
ACTAGCTTGAAGGGCTTTTG

Downstream 100 bases:

>100_bases
ATGGCCAACGTCGTCGGTTGGGCGGCTTTCATTGGTTTTTGTTGTTACTGACGATTGGCATGACCTTGCTGATTTCAGCG
CCAACTCTGTTTTTTCAAAC

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 596; Mature: 596

Protein sequence:

>596_residues
MQRFRQSSIILLLTMALLGLGSLLIAQWLRPDRSPRIWTGGNILANADWQSAADNGIPDGWSGNGIKRADTTNGYVLDDQ
YSLQLYGVNSFARSPRLTAQAGQRYRLGFQALIDPGTQRSSLGAQIQVWVHWVDTAGDDIRLDKQAPVLLGFDSQGAATW
TPVLVETEPSPNQAAWLAISIHALSDDPIYLDNLSMAAAGIYIEPYPQGAIAAVSFSVDWETAMGGAIHSLSLSTDAISS
ATTLGLQARQGTYNLLDLFAPHHIRGTWFGNGYNFLFGNQERRTWMDDPTFAWAASTPRRWQTIDWSQTPWFSHDPYGTV
ESDPAWYFGDLLEPLRNAQQTIESHTFSHMYIGFAHAKELASDSNEWQAVTSSQGIAPASSLAFPYGGSDGMTEAHWQTL
QAAGIRTVVRTRVLDATNVQRGVNDRHLLIDRRWWQPRQLPGHDLVALPDVYLTPQTAMTATNYLQQAIASGGVIDIYAH
NYEIYNPEQIGVWQTAIQQAVEAQAWIATVPEIADRWRARQTLQLTIEQTPDQLRLQLANPSRFDLAQLSLRLPAESTGS
DKGNFDQANHRLILDLPANSAEEITIWLKPSTPHVP

Sequences:

>Translated_596_residues
MQRFRQSSIILLLTMALLGLGSLLIAQWLRPDRSPRIWTGGNILANADWQSAADNGIPDGWSGNGIKRADTTNGYVLDDQ
YSLQLYGVNSFARSPRLTAQAGQRYRLGFQALIDPGTQRSSLGAQIQVWVHWVDTAGDDIRLDKQAPVLLGFDSQGAATW
TPVLVETEPSPNQAAWLAISIHALSDDPIYLDNLSMAAAGIYIEPYPQGAIAAVSFSVDWETAMGGAIHSLSLSTDAISS
ATTLGLQARQGTYNLLDLFAPHHIRGTWFGNGYNFLFGNQERRTWMDDPTFAWAASTPRRWQTIDWSQTPWFSHDPYGTV
ESDPAWYFGDLLEPLRNAQQTIESHTFSHMYIGFAHAKELASDSNEWQAVTSSQGIAPASSLAFPYGGSDGMTEAHWQTL
QAAGIRTVVRTRVLDATNVQRGVNDRHLLIDRRWWQPRQLPGHDLVALPDVYLTPQTAMTATNYLQQAIASGGVIDIYAH
NYEIYNPEQIGVWQTAIQQAVEAQAWIATVPEIADRWRARQTLQLTIEQTPDQLRLQLANPSRFDLAQLSLRLPAESTGS
DKGNFDQANHRLILDLPANSAEEITIWLKPSTPHVP
>Mature_596_residues
MQRFRQSSIILLLTMALLGLGSLLIAQWLRPDRSPRIWTGGNILANADWQSAADNGIPDGWSGNGIKRADTTNGYVLDDQ
YSLQLYGVNSFARSPRLTAQAGQRYRLGFQALIDPGTQRSSLGAQIQVWVHWVDTAGDDIRLDKQAPVLLGFDSQGAATW
TPVLVETEPSPNQAAWLAISIHALSDDPIYLDNLSMAAAGIYIEPYPQGAIAAVSFSVDWETAMGGAIHSLSLSTDAISS
ATTLGLQARQGTYNLLDLFAPHHIRGTWFGNGYNFLFGNQERRTWMDDPTFAWAASTPRRWQTIDWSQTPWFSHDPYGTV
ESDPAWYFGDLLEPLRNAQQTIESHTFSHMYIGFAHAKELASDSNEWQAVTSSQGIAPASSLAFPYGGSDGMTEAHWQTL
QAAGIRTVVRTRVLDATNVQRGVNDRHLLIDRRWWQPRQLPGHDLVALPDVYLTPQTAMTATNYLQQAIASGGVIDIYAH
NYEIYNPEQIGVWQTAIQQAVEAQAWIATVPEIADRWRARQTLQLTIEQTPDQLRLQLANPSRFDLAQLSLRLPAESTGS
DKGNFDQANHRLILDLPANSAEEITIWLKPSTPHVP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66123; Mature: 66123

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRFRQSSIILLLTMALLGLGSLLIAQWLRPDRSPRIWTGGNILANADWQSAADNGIPDG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEECCCCCCCCCCCCCCC
WSGNGIKRADTTNGYVLDDQYSLQLYGVNSFARSPRLTAQAGQRYRLGFQALIDPGTQRS
CCCCCEECCCCCCCEEECCCEEEEEEECHHHHCCCCCHHHCCCEEECCCCEEECCCCCCC
SLGAQIQVWVHWVDTAGDDIRLDKQAPVLLGFDSQGAATWTPVLVETEPSPNQAAWLAIS
CCCCEEEEEEEEEECCCCCEEECCCCCEEEEECCCCCCEEEEEEEECCCCCCCEEEEEEE
IHALSDDPIYLDNLSMAAAGIYIEPYPQGAIAAVSFSVDWETAMGGAIHSLSLSTDAISS
EEEECCCCEEEECCCEEEEEEEEECCCCCCEEEEEEEECHHHHCCCCEEEEECCHHHHCC
ATTLGLQARQGTYNLLDLFAPHHIRGTWFGNGYNFLFGNQERRTWMDDPTFAWAASTPRR
HHHEEEEECCCCHHHHHHCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCEEEECCCCCC
WQTIDWSQTPWFSHDPYGTVESDPAWYFGDLLEPLRNAQQTIESHTFSHMYIGFAHAKEL
EEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHH
ASDSNEWQAVTSSQGIAPASSLAFPYGGSDGMTEAHWQTLQAAGIRTVVRTRVLDATNVQ
HCCCCCCEEEECCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHH
RGVNDRHLLIDRRWWQPRQLPGHDLVALPDVYLTPQTAMTATNYLQQAIASGGVIDIYAH
CCCCCCEEEEECCCCCCCCCCCCCEEECCCEEECCCHHHHHHHHHHHHHHCCCEEEEEEC
NYEIYNPEQIGVWQTAIQQAVEAQAWIATVPEIADRWRARQTLQLTIEQTPDQLRLQLAN
CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEECC
PSRFDLAQLSLRLPAESTGSDKGNFDQANHRLILDLPANSAEEITIWLKPSTPHVP
CCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCC
>Mature Secondary Structure
MQRFRQSSIILLLTMALLGLGSLLIAQWLRPDRSPRIWTGGNILANADWQSAADNGIPDG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEECCCCCCCCCCCCCCC
WSGNGIKRADTTNGYVLDDQYSLQLYGVNSFARSPRLTAQAGQRYRLGFQALIDPGTQRS
CCCCCEECCCCCCCEEECCCEEEEEEECHHHHCCCCCHHHCCCEEECCCCEEECCCCCCC
SLGAQIQVWVHWVDTAGDDIRLDKQAPVLLGFDSQGAATWTPVLVETEPSPNQAAWLAIS
CCCCEEEEEEEEEECCCCCEEECCCCCEEEEECCCCCCEEEEEEEECCCCCCCEEEEEEE
IHALSDDPIYLDNLSMAAAGIYIEPYPQGAIAAVSFSVDWETAMGGAIHSLSLSTDAISS
EEEECCCCEEEECCCEEEEEEEEECCCCCCEEEEEEEECHHHHCCCCEEEEECCHHHHCC
ATTLGLQARQGTYNLLDLFAPHHIRGTWFGNGYNFLFGNQERRTWMDDPTFAWAASTPRR
HHHEEEEECCCCHHHHHHCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCEEEECCCCCC
WQTIDWSQTPWFSHDPYGTVESDPAWYFGDLLEPLRNAQQTIESHTFSHMYIGFAHAKEL
EEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHH
ASDSNEWQAVTSSQGIAPASSLAFPYGGSDGMTEAHWQTLQAAGIRTVVRTRVLDATNVQ
HCCCCCCEEEECCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHH
RGVNDRHLLIDRRWWQPRQLPGHDLVALPDVYLTPQTAMTATNYLQQAIASGGVIDIYAH
CCCCCCEEEEECCCCCCCCCCCCCEEECCCEEECCCHHHHHHHHHHHHHHCCCEEEEEEC
NYEIYNPEQIGVWQTAIQQAVEAQAWIATVPEIADRWRARQTLQLTIEQTPDQLRLQLAN
CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEECC
PSRFDLAQLSLRLPAESTGSDKGNFDQANHRLILDLPANSAEEITIWLKPSTPHVP
CCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA