Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898241

Identifier: 159898241

GI number: 159898241

Start: 1998599

End: 1999903

Strand: Reverse

Name: 159898241

Synonym: Haur_1717

Alternate gene names: NA

Gene position: 1999903-1998599 (Counterclockwise)

Preceding gene: 159898242

Following gene: 159898239

Centisome position: 31.51

GC content: 50.96

Gene sequence:

>1305_bases
ATGACTGATGCCAATCAACCGCTGCACGACGAACCCTTACCCGAATTTGATTTGCCTGACCCCAAAGATGCGATGCCGCA
TGAAGATACGCTCAGCGAGGAAGGCACGCGCGGGGTCGTGCCTGTTGACCAGTTTTTGTATGTCGGTCAGGGTCTGAAAG
CCGATGAATTTACCCATTACGTCGATACCTATAACTTTGGGGCTGTGCCACCTAACTTTGTGGTGTTGCACCATACCGCT
GTACCAAGTACTGCCGCTGCTCCTTACCCCTCAGGCTGGCGCTGGGATAACCAAGAAACTGGTTTGAGCGAAGGCCAAAT
TTACCGCAAACGCCTCAAACAGCTCGAAACCCTGCGCGAATACTATCGCACCAGCGCTGGCTGGGATCGTGGCCCACACT
TATTTATCGATGAAACCTGGATTTGGTTGTTCACGCCGATGTACGATCAAGGGATTCACGCCGCTCAAGGTAATGGCTAT
CGCGATAGTAAAGGTACATTGCAATATTCAATCGGCATCGAAGTATGTGGCTATTTTGAAAAAACCCAGTGGTCGGCTCC
CGTTGCAGCCCTGGTTGGCCATGCGGTGGCAGTGCTCAAACGCAAATTAAACAGCTTTGAGATTCGCTATCAGAAATTTG
GTGGTGGCATTTCATCGCACCGCGATTACAATAAACCTTCATGTCCAGGCGCAGCGATCACCGAATCCTATTACATCAGT
ACAATTCAAAATGCCTTTGATCGTTTGAGTAATGTTCAAAGCACGCCAATTGCTGATAATCCAATTACTACCAATACCCC
ATTGTTGAGCGCAACGCCCTCAGGCAGCCGCGAAAAGGCAATCGCCTTTATTCGTAAGAGCCTGCCCGATAATTCCGAAT
ATAAGAACGATATTGAAACGATTATGGGGTATTACTGGGTCTATGCCCCCAGCGTTGGGCTTGATCCCTTCCTCGCTGCA
TCGCAATGTATTTTTGAAACCGCTGGCTTGACTTCAGGCTGGGCTGCGCGGCCAAAACGTAATCCGGCTGGTTTGGGCGT
GCGCCAAGAGGGCGGCCTTTCGTTCAGCACCTGGGATGGCGCAGTCCAAGCGCATATTGGGCAATTATTGGCCTTGGCCT
TGCGTGATGATGAGGCTAATCAAGCCCAAAAAACCATGATGGCTGCCAATCCACGCCATGGCAACATTCCAGCCAATCTG
CGTGGGGTTGCCAAAACGTTGGCTGGCTTGAGCAATAATTGGACTGACGATGCCGATTATGCCAACAAGTTTGCGACTCG
CGCCGAGGCAATTCGCAAGGGCTAG

Upstream 100 bases:

>100_bases
GGCTCGAATTGGCTAGGGCGATAATCGTACCTAGCCAACCTCTAAGCTTGAATTGTATAATTGGGCTGTTCTCGGTGTTT
TGTGCGAAGGAGATCAATCA

Downstream 100 bases:

>100_bases
CTTTCAGGCGTAGGATATAACGCCCATCACCCCGACATCACTCGACGGCGGCGGGCATCACTCCTAGAGCGGTTCCCCCT
CGCCCGCACGCGAGGCGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 433

Protein sequence:

>434_residues
MTDANQPLHDEPLPEFDLPDPKDAMPHEDTLSEEGTRGVVPVDQFLYVGQGLKADEFTHYVDTYNFGAVPPNFVVLHHTA
VPSTAAAPYPSGWRWDNQETGLSEGQIYRKRLKQLETLREYYRTSAGWDRGPHLFIDETWIWLFTPMYDQGIHAAQGNGY
RDSKGTLQYSIGIEVCGYFEKTQWSAPVAALVGHAVAVLKRKLNSFEIRYQKFGGGISSHRDYNKPSCPGAAITESYYIS
TIQNAFDRLSNVQSTPIADNPITTNTPLLSATPSGSREKAIAFIRKSLPDNSEYKNDIETIMGYYWVYAPSVGLDPFLAA
SQCIFETAGLTSGWAARPKRNPAGLGVRQEGGLSFSTWDGAVQAHIGQLLALALRDDEANQAQKTMMAANPRHGNIPANL
RGVAKTLAGLSNNWTDDADYANKFATRAEAIRKG

Sequences:

>Translated_434_residues
MTDANQPLHDEPLPEFDLPDPKDAMPHEDTLSEEGTRGVVPVDQFLYVGQGLKADEFTHYVDTYNFGAVPPNFVVLHHTA
VPSTAAAPYPSGWRWDNQETGLSEGQIYRKRLKQLETLREYYRTSAGWDRGPHLFIDETWIWLFTPMYDQGIHAAQGNGY
RDSKGTLQYSIGIEVCGYFEKTQWSAPVAALVGHAVAVLKRKLNSFEIRYQKFGGGISSHRDYNKPSCPGAAITESYYIS
TIQNAFDRLSNVQSTPIADNPITTNTPLLSATPSGSREKAIAFIRKSLPDNSEYKNDIETIMGYYWVYAPSVGLDPFLAA
SQCIFETAGLTSGWAARPKRNPAGLGVRQEGGLSFSTWDGAVQAHIGQLLALALRDDEANQAQKTMMAANPRHGNIPANL
RGVAKTLAGLSNNWTDDADYANKFATRAEAIRKG
>Mature_433_residues
TDANQPLHDEPLPEFDLPDPKDAMPHEDTLSEEGTRGVVPVDQFLYVGQGLKADEFTHYVDTYNFGAVPPNFVVLHHTAV
PSTAAAPYPSGWRWDNQETGLSEGQIYRKRLKQLETLREYYRTSAGWDRGPHLFIDETWIWLFTPMYDQGIHAAQGNGYR
DSKGTLQYSIGIEVCGYFEKTQWSAPVAALVGHAVAVLKRKLNSFEIRYQKFGGGISSHRDYNKPSCPGAAITESYYIST
IQNAFDRLSNVQSTPIADNPITTNTPLLSATPSGSREKAIAFIRKSLPDNSEYKNDIETIMGYYWVYAPSVGLDPFLAAS
QCIFETAGLTSGWAARPKRNPAGLGVRQEGGLSFSTWDGAVQAHIGQLLALALRDDEANQAQKTMMAANPRHGNIPANLR
GVAKTLAGLSNNWTDDADYANKFATRAEAIRKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47930; Mature: 47799

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDANQPLHDEPLPEFDLPDPKDAMPHEDTLSEEGTRGVVPVDQFLYVGQGLKADEFTHY
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHCCCCCHHHHHHH
VDTYNFGAVPPNFVVLHHTAVPSTAAAPYPSGWRWDNQETGLSEGQIYRKRLKQLETLRE
HHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
YYRTSAGWDRGPHLFIDETWIWLFTPMYDQGIHAAQGNGYRDSKGTLQYSIGIEVCGYFE
HHHHCCCCCCCCEEEEECCEEEEECCHHHCCCCCCCCCCCCCCCCCEEEEECEEEECCHH
KTQWSAPVAALVGHAVAVLKRKLNSFEIRYQKFGGGISSHRDYNKPSCPGAAITESYYIS
HCCCCCHHHHHHHHHHHHHHHHHHHHEEEHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH
TIQNAFDRLSNVQSTPIADNPITTNTPLLSATPSGSREKAIAFIRKSLPDNSEYKNDIET
HHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHH
IMGYYWVYAPSVGLDPFLAASQCIFETAGLTSGWAARPKRNPAGLGVRQEGGLSFSTWDG
HHHHHHEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCEEECCCH
AVQAHIGQLLALALRDDEANQAQKTMMAANPRHGNIPANLRGVAKTLAGLSNNWTDDADY
HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHH
ANKFATRAEAIRKG
HHHHHHHHHHHHCC
>Mature Secondary Structure 
TDANQPLHDEPLPEFDLPDPKDAMPHEDTLSEEGTRGVVPVDQFLYVGQGLKADEFTHY
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHCCCCCHHHHHHH
VDTYNFGAVPPNFVVLHHTAVPSTAAAPYPSGWRWDNQETGLSEGQIYRKRLKQLETLRE
HHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
YYRTSAGWDRGPHLFIDETWIWLFTPMYDQGIHAAQGNGYRDSKGTLQYSIGIEVCGYFE
HHHHCCCCCCCCEEEEECCEEEEECCHHHCCCCCCCCCCCCCCCCCEEEEECEEEECCHH
KTQWSAPVAALVGHAVAVLKRKLNSFEIRYQKFGGGISSHRDYNKPSCPGAAITESYYIS
HCCCCCHHHHHHHHHHHHHHHHHHHHEEEHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH
TIQNAFDRLSNVQSTPIADNPITTNTPLLSATPSGSREKAIAFIRKSLPDNSEYKNDIET
HHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHH
IMGYYWVYAPSVGLDPFLAASQCIFETAGLTSGWAARPKRNPAGLGVRQEGGLSFSTWDG
HHHHHHEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCEEECCCH
AVQAHIGQLLALALRDDEANQAQKTMMAANPRHGNIPANLRGVAKTLAGLSNNWTDDADY
HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHH
ANKFATRAEAIRKG
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA