| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898205
Identifier: 159898205
GI number: 159898205
Start: 1955359
End: 1956561
Strand: Reverse
Name: 159898205
Synonym: Haur_1681
Alternate gene names: NA
Gene position: 1956561-1955359 (Counterclockwise)
Preceding gene: 159898206
Following gene: 159898204
Centisome position: 30.83
GC content: 52.87
Gene sequence:
>1203_bases ATGCTTAATCGTCGCCAATTGCTAGGGCTAGCGCCAAACTTTCAGGTTGTTCAACGCCAACCTATCGCGGTTAGCCCAGC CCAACGTGATGTTTTGATTTGTGTATTTCAGCGGGGCGGAGCCGATGGATTGAACATGGTTGTGCCGCATGGCGAGGCTG CCTACTACCAAGCTCGCCCAAATGTGGCGATTGCCCAGCCCAACCAACAATTGGGGGCAATTGATCTTGATGGATTTTTT GGGCTGCACCCCAGCCTTGAGCCATTCAAAGAAATTTGGAATGCCAAACAACTGGCGATCGTGCATGCATGCGGCTCGCC CGACCCAACCCACTCGCATTTTGATGCCATGGATTATATGGAGCGAGGCACACCTGGCCAAAAGAGCGACCCGCGCGGCT GGCTAGGGCGGCATCTAGCAGCAACTCAACAAAGCAACGATTCACCATTTCGCGCCGTAGGGTTTGGCTCGTTGCTCCAA GCCTCATTGCGCGGCGGCTCGGCCACAGCACTCACCAGCCTTGAGGCTTTTAATCTTCAAGCCAACCGCCTAGAACTACC CAAACTTCGTGCTGCCCATGGTCAACTCTATCGTGGCTCGGGCATGTTGGTTGGAGCCGCCCAACAAACTTTTGCGGCAC TTGAAATTATGCAAAAACTCAATCCAAGCCAATATCAACCGAGCGATGGTGCGGTGTATCCTGATAGCCCTTATGGCAAG GCTTTAAAGCAAATTGCTCAACTGATCAAGGCCGATTTGGGCTTAGAGGTCGCCTGTGCCGACATCGGCGATTGGGATAC GCATGTCAATCAAGGTGGCGCTGATGGCGAGATGGCCGCCAATTTGGCTGAATTTGCGGCTGGCCTACGGGCATTGTATA CCGATTTGAGCGCCAATTTAGGCCGAGTGACGATTGTAACCATGAGCGAATTTGGGCGCAGGGCTGCTGAAAACGGTGGC GGCGGGACTGATCATGGCCATGGCAATGTGATGTTTGTTATGGGTGGCAACGTAACTGGCGGCATCTATGGCACATGGCC AGGCTTGCAGCCCGAACAACTTTACGGGCCTGGCGATTTAGCAATCACCAGCGATTTTCGCGATGTATTGGCTGAAATTT TACAAAAGCGCCTGCGCGACCAACAGCTTAATGAGCTATTTCCTGAGTATACGCCAAGCCAAAGTTACCAGTTAGTTCGT TAA
Upstream 100 bases:
>100_bases ACCATTGGTTAGCAATTCAGGTAGTTAATCGGCCTAACCTGCGCGATCTTCGTGGTTTCAAGCTTCGTGGCCTTCGTCGA TTATTCAAAGGAGTTTTATC
Downstream 100 bases:
>100_bases TCTTTACCCAAAACAAGCTTATCGCGCGGTAAATTCATAGTACAATCAGGATTAGATCCTATGATTGAGTTGTGAGGAAT TAAGCAGATGGCTAAAATGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 400; Mature: 400
Protein sequence:
>400_residues MLNRRQLLGLAPNFQVVQRQPIAVSPAQRDVLICVFQRGGADGLNMVVPHGEAAYYQARPNVAIAQPNQQLGAIDLDGFF GLHPSLEPFKEIWNAKQLAIVHACGSPDPTHSHFDAMDYMERGTPGQKSDPRGWLGRHLAATQQSNDSPFRAVGFGSLLQ ASLRGGSATALTSLEAFNLQANRLELPKLRAAHGQLYRGSGMLVGAAQQTFAALEIMQKLNPSQYQPSDGAVYPDSPYGK ALKQIAQLIKADLGLEVACADIGDWDTHVNQGGADGEMAANLAEFAAGLRALYTDLSANLGRVTIVTMSEFGRRAAENGG GGTDHGHGNVMFVMGGNVTGGIYGTWPGLQPEQLYGPGDLAITSDFRDVLAEILQKRLRDQQLNELFPEYTPSQSYQLVR
Sequences:
>Translated_400_residues MLNRRQLLGLAPNFQVVQRQPIAVSPAQRDVLICVFQRGGADGLNMVVPHGEAAYYQARPNVAIAQPNQQLGAIDLDGFF GLHPSLEPFKEIWNAKQLAIVHACGSPDPTHSHFDAMDYMERGTPGQKSDPRGWLGRHLAATQQSNDSPFRAVGFGSLLQ ASLRGGSATALTSLEAFNLQANRLELPKLRAAHGQLYRGSGMLVGAAQQTFAALEIMQKLNPSQYQPSDGAVYPDSPYGK ALKQIAQLIKADLGLEVACADIGDWDTHVNQGGADGEMAANLAEFAAGLRALYTDLSANLGRVTIVTMSEFGRRAAENGG GGTDHGHGNVMFVMGGNVTGGIYGTWPGLQPEQLYGPGDLAITSDFRDVLAEILQKRLRDQQLNELFPEYTPSQSYQLVR >Mature_400_residues MLNRRQLLGLAPNFQVVQRQPIAVSPAQRDVLICVFQRGGADGLNMVVPHGEAAYYQARPNVAIAQPNQQLGAIDLDGFF GLHPSLEPFKEIWNAKQLAIVHACGSPDPTHSHFDAMDYMERGTPGQKSDPRGWLGRHLAATQQSNDSPFRAVGFGSLLQ ASLRGGSATALTSLEAFNLQANRLELPKLRAAHGQLYRGSGMLVGAAQQTFAALEIMQKLNPSQYQPSDGAVYPDSPYGK ALKQIAQLIKADLGLEVACADIGDWDTHVNQGGADGEMAANLAEFAAGLRALYTDLSANLGRVTIVTMSEFGRRAAENGG GGTDHGHGNVMFVMGGNVTGGIYGTWPGLQPEQLYGPGDLAITSDFRDVLAEILQKRLRDQQLNELFPEYTPSQSYQLVR
Specific function: Unknown
COG id: COG4102
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43123; Mature: 43123
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNRRQLLGLAPNFQVVQRQPIAVSPAQRDVLICVFQRGGADGLNMVVPHGEAAYYQARP CCCCHHHEECCCCCHHEECCCCEECCCCCCEEEEEEECCCCCCCEEEECCCCCEEEECCC NVAIAQPNQQLGAIDLDGFFGLHPSLEPFKEIWNAKQLAIVHACGSPDPTHSHFDAMDYM CEEEECCCCCCCCEECCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHH ERGTPGQKSDPRGWLGRHLAATQQSNDSPFRAVGFGSLLQASLRGGSATALTSLEAFNLQ HCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHCCCCCHHHHHHHHHCCC ANRLELPKLRAAHGQLYRGSGMLVGAAQQTFAALEIMQKLNPSQYQPSDGAVYPDSPYGK CCCCCCCHHHHHCCCEEECCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH ALKQIAQLIKADLGLEVACADIGDWDTHVNQGGADGEMAANLAEFAAGLRALYTDLSANL HHHHHHHHHHHCCCCEEEEECCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC GRVTIVTMSEFGRRAAENGGGGTDHGHGNVMFVMGGNVTGGIYGTWPGLQPEQLYGPGDL CEEEEEEHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCEEECCCCCCHHHCCCCCCE AITSDFRDVLAEILQKRLRDQQLNELFPEYTPSQSYQLVR EEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECC >Mature Secondary Structure MLNRRQLLGLAPNFQVVQRQPIAVSPAQRDVLICVFQRGGADGLNMVVPHGEAAYYQARP CCCCHHHEECCCCCHHEECCCCEECCCCCCEEEEEEECCCCCCCEEEECCCCCEEEECCC NVAIAQPNQQLGAIDLDGFFGLHPSLEPFKEIWNAKQLAIVHACGSPDPTHSHFDAMDYM CEEEECCCCCCCCEECCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHH ERGTPGQKSDPRGWLGRHLAATQQSNDSPFRAVGFGSLLQASLRGGSATALTSLEAFNLQ HCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHCCCCCHHHHHHHHHCCC ANRLELPKLRAAHGQLYRGSGMLVGAAQQTFAALEIMQKLNPSQYQPSDGAVYPDSPYGK CCCCCCCHHHHHCCCEEECCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH ALKQIAQLIKADLGLEVACADIGDWDTHVNQGGADGEMAANLAEFAAGLRALYTDLSANL HHHHHHHHHHHCCCCEEEEECCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC GRVTIVTMSEFGRRAAENGGGGTDHGHGNVMFVMGGNVTGGIYGTWPGLQPEQLYGPGDL CEEEEEEHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCEEECCCCCCHHHCCCCCCE AITSDFRDVLAEILQKRLRDQQLNELFPEYTPSQSYQLVR EEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA