Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159897647

Identifier: 159897647

GI number: 159897647

Start: 1280841

End: 1281461

Strand: Direct

Name: 159897647

Synonym: Haur_1118

Alternate gene names: NA

Gene position: 1280841-1281461 (Clockwise)

Preceding gene: 159897646

Following gene: 159897648

Centisome position: 20.18

GC content: 47.02

Gene sequence:

>621_bases
ATGTTTATCGGAATGTATCTTGCAATCTGGTTGGCGCTGGCAGGGGCAATTTGGTGGTCGATCCGCTCCAAAAATTCAAT
TGGGCGCATGCAGCATTTATTGGGCATTAGCCTGATCGAGCCAATTATCACGGTAATTATGCTGATTGGGATGTATCCGG
TGTTGTTAGAATGGGCTTGGCAAGAAAACATGATTAGTATTGCTAGCTATCAGTTGATCAACTCGAATGATGTGCTGAAT
AGCGTGCTTGCTACAGTTTCAGTTGGGCTGGCCTTGCTGCCATTGCTGTTGCTGTTTGATGAGCAAGCTGTCGTGCGTAG
TGTTGCTTGGCAAGCAGGCTTGATAGGTTTATTCCGTTGGGGATGTTTGTTGGGCCTAGGCTTTCTTTTGAGTGCTGATT
TGCATCCATGGATCAATACCTTCTTGGTCGTTGGCTATCTGATTATGATTGCGCTGACGATTTATCTGCTGAATGCCAAA
TTGCGCGGGCGCTTGGATCAAGCAGGTTCGCCGTTGCCCGTTGAAACCGAGCAATTATTTCAAGGCCAGCCGATCGTCTA
TGTAGACCCAAATCTGCAACCAATGATCATGATCGATCCGCCCAAGGATGAAGGTAAGTGA

Upstream 100 bases:

>100_bases
CTAAGCAATTTGAACGCCGACATGGATGCGTTTCAGCATGTTTTAGAAGGCGCTATGTCACAAAGTGGCGTAGCCTAGGT
TTATAACGAGGGAGAATTGA

Downstream 100 bases:

>100_bases
TGGTGCTATACTAACCAGCATTACAGGATATCGACTCAACGACGCTGCGGTATACTAATCGCACGTCGTTGTTGCGTTTT
AGAGGATGGTTCATGACCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MFIGMYLAIWLALAGAIWWSIRSKNSIGRMQHLLGISLIEPIITVIMLIGMYPVLLEWAWQENMISIASYQLINSNDVLN
SVLATVSVGLALLPLLLLFDEQAVVRSVAWQAGLIGLFRWGCLLGLGFLLSADLHPWINTFLVVGYLIMIALTIYLLNAK
LRGRLDQAGSPLPVETEQLFQGQPIVYVDPNLQPMIMIDPPKDEGK

Sequences:

>Translated_206_residues
MFIGMYLAIWLALAGAIWWSIRSKNSIGRMQHLLGISLIEPIITVIMLIGMYPVLLEWAWQENMISIASYQLINSNDVLN
SVLATVSVGLALLPLLLLFDEQAVVRSVAWQAGLIGLFRWGCLLGLGFLLSADLHPWINTFLVVGYLIMIALTIYLLNAK
LRGRLDQAGSPLPVETEQLFQGQPIVYVDPNLQPMIMIDPPKDEGK
>Mature_206_residues
MFIGMYLAIWLALAGAIWWSIRSKNSIGRMQHLLGISLIEPIITVIMLIGMYPVLLEWAWQENMISIASYQLINSNDVLN
SVLATVSVGLALLPLLLLFDEQAVVRSVAWQAGLIGLFRWGCLLGLGFLLSADLHPWINTFLVVGYLIMIALTIYLLNAK
LRGRLDQAGSPLPVETEQLFQGQPIVYVDPNLQPMIMIDPPKDEGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22944; Mature: 22944

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIGMYLAIWLALAGAIWWSIRSKNSIGRMQHLLGISLIEPIITVIMLIGMYPVLLEWAW
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QENMISIASYQLINSNDVLNSVLATVSVGLALLPLLLLFDEQAVVRSVAWQAGLIGLFRW
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
GCLLGLGFLLSADLHPWINTFLVVGYLIMIALTIYLLNAKLRGRLDQAGSPLPVETEQLF
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHH
QGQPIVYVDPNLQPMIMIDPPKDEGK
CCCCEEEECCCCCEEEEECCCCCCCC
>Mature Secondary Structure
MFIGMYLAIWLALAGAIWWSIRSKNSIGRMQHLLGISLIEPIITVIMLIGMYPVLLEWAW
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QENMISIASYQLINSNDVLNSVLATVSVGLALLPLLLLFDEQAVVRSVAWQAGLIGLFRW
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
GCLLGLGFLLSADLHPWINTFLVVGYLIMIALTIYLLNAKLRGRLDQAGSPLPVETEQLF
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHH
QGQPIVYVDPNLQPMIMIDPPKDEGK
CCCCEEEECCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA