| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is malE [H]
Identifier: 159897419
GI number: 159897419
Start: 1016995
End: 1018347
Strand: Reverse
Name: malE [H]
Synonym: Haur_0890
Alternate gene names: 159897419
Gene position: 1018347-1016995 (Counterclockwise)
Preceding gene: 159897420
Following gene: 159897418
Centisome position: 16.05
GC content: 51.52
Gene sequence:
>1353_bases ATGCACCGTAAGCCATCTCAGCCACCCCGCACAGTTCGTAGCCTTGGATTCAGTTTGATCGTTCTGCTGATCTTGGCTGC CTGTGGTCAAGCAGCCACGCCACCAACCCAAATCAACCCAACCAGCTTGCCCACCGATACACCGCCAACCGCCGTGCCAG CCCTCGCCAACTCGGCAGATAAGGCCTTGGTTATTTGGTCAACTGGCTCAGAGGTCGAGGCACTTTCAATTCAAGCAGCA GCAGATATCTTTGTGCAGAAAAATCCTGGGGTCTTGATTAAAGTTCAAGCCTTGCCCTGGAGCGATGCTCATACCCAAAT TCTTGAGGCCATCGCCGCCGATCGCGGGCCAGATCTGATGGCTGGCGGTATGTCATGGGGCATCGAGTTTGGCAAATTGG GTGGCATGATCGATCTGCAAAAGGCCTATCCCGATGTGGTAAGCGATGTTAAGCAAAAGATGTTGCCGCAACTCCAAGAT TCATTGTTCTTGGATACAGGCGAGGTCTATGCATTACAACTCGATGTGGCATTGATGGGGATGTTCTATCGCACTGATTT GCTGCGCGATTTAGTCGGCATGCAACAAGCTCCCCAAAACTGGACTGAACTGACCAAAGTGCTAGAAAAAGCCCGCACGA TCAATAAAAAAGGCTTTGCGATTGGCTGGGATAACGCTGGCTGGATCAGCTACTTTACCTTTTTATATTCAGCTGGTGGC AGTTTATATAACGACGATTGCTCCAAAGCCACAATCAACTCGGCGGCTGGCTTACAAGCTCTGACCTACTTCCGCGATCT CTACACCAAATATCAAATTCCCACCGATACTGCCTTGGATATTGAAGGCGGCCTCGAAAGCGGCGATTATCTAGTGAGCT ATGCTGGCACTTGGACGGTTGCAGCACTGGAATTCAATCGGCCTGAGTTGGCGGGCAAATGGGCCTTGGCTCCGCTGCCC AAAAGCCCCAAAGGCCAAAGTGTTGCGTTCCTTGGAGGGCGGGTCATCGGCGTGATGGAAGCTTCGCAGAACAAAGATCT GGCTGCCGAATTTATTCGCTTTTTGTATACCGAAGAAGCGGTTGCCGCCCAATCGGCCTATGCACAAAGTGCCAGTAACT ATTATGTGCCGCCAAGTTTGCCCTTGCTCAGCGCCGCCAAATTGCCAACCCATATCGAAGCTGGCTTCCGTGGCTTGTTG GAGCAATCGGCAGGCCCGCCCAAGTGCGTCGGCTGGGAAGAAAGCACCACCGATGTCCAAAAATTATTGCAAGAAGTCGT CTACAACAATGCTGATCCCCAAGATGCTTTAGATCAAGCAGCGGAGATCATGAATCGCAATTTACAACCATAG
Upstream 100 bases:
>100_bases TATATACTTAACGATGTTTGGGAAGGGTTATCGATGCACAGCCTACCAACACCCAAACAACCTGCATCGATGCATGTATA GGCCAAGGGAGGTCAGCGTT
Downstream 100 bases:
>100_bases GGGAGTAATTGCGCCACTGCGGGATTTGAAGTTGTACAGGGGGAATTATGCGTCGATGGCTCTATCGCTTACATCTATGG TTGGTTCTGCTGCTGTTGAT
Product: extracellular solute-binding protein
Products: ADP; phosphate; maltose [Cytoplasm] [C]
Alternate protein names: MMBP; Maltodextrin-binding protein [H]
Number of amino acids: Translated: 450; Mature: 450
Protein sequence:
>450_residues MHRKPSQPPRTVRSLGFSLIVLLILAACGQAATPPTQINPTSLPTDTPPTAVPALANSADKALVIWSTGSEVEALSIQAA ADIFVQKNPGVLIKVQALPWSDAHTQILEAIAADRGPDLMAGGMSWGIEFGKLGGMIDLQKAYPDVVSDVKQKMLPQLQD SLFLDTGEVYALQLDVALMGMFYRTDLLRDLVGMQQAPQNWTELTKVLEKARTINKKGFAIGWDNAGWISYFTFLYSAGG SLYNDDCSKATINSAAGLQALTYFRDLYTKYQIPTDTALDIEGGLESGDYLVSYAGTWTVAALEFNRPELAGKWALAPLP KSPKGQSVAFLGGRVIGVMEASQNKDLAAEFIRFLYTEEAVAAQSAYAQSASNYYVPPSLPLLSAAKLPTHIEAGFRGLL EQSAGPPKCVGWEESTTDVQKLLQEVVYNNADPQDALDQAAEIMNRNLQP
Sequences:
>Translated_450_residues MHRKPSQPPRTVRSLGFSLIVLLILAACGQAATPPTQINPTSLPTDTPPTAVPALANSADKALVIWSTGSEVEALSIQAA ADIFVQKNPGVLIKVQALPWSDAHTQILEAIAADRGPDLMAGGMSWGIEFGKLGGMIDLQKAYPDVVSDVKQKMLPQLQD SLFLDTGEVYALQLDVALMGMFYRTDLLRDLVGMQQAPQNWTELTKVLEKARTINKKGFAIGWDNAGWISYFTFLYSAGG SLYNDDCSKATINSAAGLQALTYFRDLYTKYQIPTDTALDIEGGLESGDYLVSYAGTWTVAALEFNRPELAGKWALAPLP KSPKGQSVAFLGGRVIGVMEASQNKDLAAEFIRFLYTEEAVAAQSAYAQSASNYYVPPSLPLLSAAKLPTHIEAGFRGLL EQSAGPPKCVGWEESTTDVQKLLQEVVYNNADPQDALDQAAEIMNRNLQP >Mature_450_residues MHRKPSQPPRTVRSLGFSLIVLLILAACGQAATPPTQINPTSLPTDTPPTAVPALANSADKALVIWSTGSEVEALSIQAA ADIFVQKNPGVLIKVQALPWSDAHTQILEAIAADRGPDLMAGGMSWGIEFGKLGGMIDLQKAYPDVVSDVKQKMLPQLQD SLFLDTGEVYALQLDVALMGMFYRTDLLRDLVGMQQAPQNWTELTKVLEKARTINKKGFAIGWDNAGWISYFTFLYSAGG SLYNDDCSKATINSAAGLQALTYFRDLYTKYQIPTDTALDIEGGLESGDYLVSYAGTWTVAALEFNRPELAGKWALAPLP KSPKGQSVAFLGGRVIGVMEASQNKDLAAEFIRFLYTEEAVAAQSAYAQSASNYYVPPSLPLLSAAKLPTHIEAGFRGLL EQSAGPPKCVGWEESTTDVQKLLQEVVYNNADPQDALDQAAEIMNRNLQP
Specific function: Involved in an abc transport system for maltotriose [H]
COG id: COG1653
COG function: function code G; ABC-type sugar transport system, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: 660 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 720 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase,
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006060 - InterPro: IPR006059 - InterPro: IPR006061 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 48667; Mature: 48667
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRKPSQPPRTVRSLGFSLIVLLILAACGQAATPPTQINPTSLPTDTPPTAVPALANSAD CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCC KALVIWSTGSEVEALSIQAAADIFVQKNPGVLIKVQALPWSDAHTQILEAIAADRGPDLM CEEEEEECCCCCEEEEHEEHEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCEE AGGMSWGIEFGKLGGMIDLQKAYPDVVSDVKQKMLPQLQDSLFLDTGEVYALQLDVALMG ECCHHHCCHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEHHHHHH MFYRTDLLRDLVGMQQAPQNWTELTKVLEKARTINKKGFAIGWDNAGWISYFTFLYSAGG HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHCCC SLYNDDCSKATINSAAGLQALTYFRDLYTKYQIPTDTALDIEGGLESGDYLVSYAGTWTV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEEECCCEEE AALEFNRPELAGKWALAPLPKSPKGQSVAFLGGRVIGVMEASQNKDLAAEFIRFLYTEEA EEEECCCCCCCCCEEECCCCCCCCCCEEEEECCEEEEEEECCCCCHHHHHHHHHHHHHHH VAAQSAYAQSASNYYVPPSLPLLSAAKLPTHIEAGFRGLLEQSAGPPKCVGWEESTTDVQ HHHHHHHHHCCCCEECCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH KLLQEVVYNNADPQDALDQAAEIMNRNLQP HHHHHHHHCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MHRKPSQPPRTVRSLGFSLIVLLILAACGQAATPPTQINPTSLPTDTPPTAVPALANSAD CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCC KALVIWSTGSEVEALSIQAAADIFVQKNPGVLIKVQALPWSDAHTQILEAIAADRGPDLM CEEEEEECCCCCEEEEHEEHEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCEE AGGMSWGIEFGKLGGMIDLQKAYPDVVSDVKQKMLPQLQDSLFLDTGEVYALQLDVALMG ECCHHHCCHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEHHHHHH MFYRTDLLRDLVGMQQAPQNWTELTKVLEKARTINKKGFAIGWDNAGWISYFTFLYSAGG HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHCCC SLYNDDCSKATINSAAGLQALTYFRDLYTKYQIPTDTALDIEGGLESGDYLVSYAGTWTV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEEECCCEEE AALEFNRPELAGKWALAPLPKSPKGQSVAFLGGRVIGVMEASQNKDLAAEFIRFLYTEEA EEEECCCCCCCCCEEECCCCCCCCCCEEEEECCEEEEEEECCCCCHHHHHHHHHHHHHHH VAAQSAYAQSASNYYVPPSLPLLSAAKLPTHIEAGFRGLLEQSAGPPKCVGWEESTTDVQ HHHHHHHHHCCCCEECCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH KLLQEVVYNNADPQDALDQAAEIMNRNLQP HHHHHHHHCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; maltose [Periplasm]; H2O [C]
Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12622808 [H]