| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897420
Identifier: 159897420
GI number: 159897420
Start: 1018578
End: 1019576
Strand: Reverse
Name: 159897420
Synonym: Haur_0891
Alternate gene names: NA
Gene position: 1019576-1018578 (Counterclockwise)
Preceding gene: 159897421
Following gene: 159897419
Centisome position: 16.06
GC content: 51.35
Gene sequence:
>999_bases ATGGAAGCAGCGACGCTTCAATCCACAACCATCCTTGGAAGTGCGCTCCCCTCAATTCCATGGGAAGAACGTCCGGTCGG CAATTCAGATGTTGTTTGGCGCTACAGCGGCAATCCGGTGATTCCGCGTGATGCCATTCCTACCTCAAATAGTATCTTCA ACAGTGCTGTTGTGCCCTTCAAAGATGGCTTTGCCGGCGTGTTTCGCTGCGATGATAAACGCCGCGTGATGAACATTCAT CGTGGCTTTAGCAAAGATGCCGTCAATTGGGAGATCGATCCCAAGCCGTTGGAATTTTCGGGTGATCCCGAAGTTACGGC CTTTGAATATCGCTATGACCCGCGGGTCTGTTGGATCGAAGATCGCTATTATGTCACCTGGTGTAATGGCTATCATGGCC CAACCATCGGCGTAGCCTATACCTACGATTTTGAAACATTCCATCAGTTAGAAAATGCCTTCTTGCCGTTTAATCGCAAT GGGGTGCTCTTCCCACGCCGCATCAATGGCAAATATGCCATGGTCAGTCGCCCCAGCGATAACGGTCACACGCCATTTGG CGATATTTACTACAGCGAAAGCCCCGATATGGAACACTGGGGCAAACATCGCTTTGTGATGGGCACAAAAGGCGGCTGGC AAAGCACCAAAATCGGCGCAGGCCCAACCCCCATCGAAACAACCGAAGGTTGGTTGTTGTTCTATCACGGCGTATTGACT TCGTGCAATGGCTTTGTCTATAGTTTTGGGGCCGCCTTGCTCGATTTGGAGCAGCCTTGGAAAGTGATTTATCGCACCGC GCCCTATCTGCTTGCGCCCCAAACCTTGTATGAATGTGTTGGCGATGTGCCAAACGTGGCCTTCCCATGTGCGGCCTTGA CCGACGCTGCCACAGGCCGAATTGCCATTTATTATGGCTGTGCTGATACCGTTACCGGCATTGCCTTTGCCCAAGTTGAT GAAGTGCTGAGCTTCCTTAAAGCGAATTCAGAGATCTAG
Upstream 100 bases:
>100_bases AGGCTCCGGCGACAGTCTCGCTGCGGCCACGGCTGCTTGAACGCCAATCAGTTCAACGTTTGCAACCACCAAAGTAGGTT GCCTTGTAGGAGTATCAGCT
Downstream 100 bases:
>100_bases AATGTTCTAGTACTAGGCCATGTGGTCGAGGGCGGCGTTCCAAACGAGGTAGGTTGTTCACCTAACGTACCTACCTCGTA ATAGGAAGATTGATGCTGGC
Product: glycosidase-like protein
Products: NA
Alternate protein names: Glycosidase Related Protein; Glycosylase; Glycosidase-Like Protein; Conserved Domain Protein; Glycosidase-Related; Glycosidase-Related Protein; Cytoplasmic Protein; Glycosylase-Like Protein; Unknwon Conserved Protein
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MEAATLQSTTILGSALPSIPWEERPVGNSDVVWRYSGNPVIPRDAIPTSNSIFNSAVVPFKDGFAGVFRCDDKRRVMNIH RGFSKDAVNWEIDPKPLEFSGDPEVTAFEYRYDPRVCWIEDRYYVTWCNGYHGPTIGVAYTYDFETFHQLENAFLPFNRN GVLFPRRINGKYAMVSRPSDNGHTPFGDIYYSESPDMEHWGKHRFVMGTKGGWQSTKIGAGPTPIETTEGWLLFYHGVLT SCNGFVYSFGAALLDLEQPWKVIYRTAPYLLAPQTLYECVGDVPNVAFPCAALTDAATGRIAIYYGCADTVTGIAFAQVD EVLSFLKANSEI
Sequences:
>Translated_332_residues MEAATLQSTTILGSALPSIPWEERPVGNSDVVWRYSGNPVIPRDAIPTSNSIFNSAVVPFKDGFAGVFRCDDKRRVMNIH RGFSKDAVNWEIDPKPLEFSGDPEVTAFEYRYDPRVCWIEDRYYVTWCNGYHGPTIGVAYTYDFETFHQLENAFLPFNRN GVLFPRRINGKYAMVSRPSDNGHTPFGDIYYSESPDMEHWGKHRFVMGTKGGWQSTKIGAGPTPIETTEGWLLFYHGVLT SCNGFVYSFGAALLDLEQPWKVIYRTAPYLLAPQTLYECVGDVPNVAFPCAALTDAATGRIAIYYGCADTVTGIAFAQVD EVLSFLKANSEI >Mature_332_residues MEAATLQSTTILGSALPSIPWEERPVGNSDVVWRYSGNPVIPRDAIPTSNSIFNSAVVPFKDGFAGVFRCDDKRRVMNIH RGFSKDAVNWEIDPKPLEFSGDPEVTAFEYRYDPRVCWIEDRYYVTWCNGYHGPTIGVAYTYDFETFHQLENAFLPFNRN GVLFPRRINGKYAMVSRPSDNGHTPFGDIYYSESPDMEHWGKHRFVMGTKGGWQSTKIGAGPTPIETTEGWLLFYHGVLT SCNGFVYSFGAALLDLEQPWKVIYRTAPYLLAPQTLYECVGDVPNVAFPCAALTDAATGRIAIYYGCADTVTGIAFAQVD EVLSFLKANSEI
Specific function: Unknown
COG id: COG2152
COG function: function code G; Predicted glycosylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37161; Mature: 37161
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAATLQSTTILGSALPSIPWEERPVGNSDVVWRYSGNPVIPRDAIPTSNSIFNSAVVPF CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHCCCCCCC KDGFAGVFRCDDKRRVMNIHRGFSKDAVNWEIDPKPLEFSGDPEVTAFEYRYDPRVCWIE CCCCCEEEEECCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEECCEEEEEE DRYYVTWCNGYHGPTIGVAYTYDFETFHQLENAFLPFNRNGVLFPRRINGKYAMVSRPSD CCEEEEEECCCCCCEEEEEEEECHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEECCCC NGHTPFGDIYYSESPDMEHWGKHRFVMGTKGGWQSTKIGAGPTPIETTEGWLLFYHGVLT CCCCCCCEEEECCCCCHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHH SCNGFVYSFGAALLDLEQPWKVIYRTAPYLLAPQTLYECVGDVPNVAFPCAALTDAATGR CCCCHHEEHHHHHCCCCCCHHHHHHCCCCEECHHHHHHHHCCCCCCCCCHHHHHCCCCCE IAIYYGCADTVTGIAFAQVDEVLSFLKANSEI EEEEECCHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MEAATLQSTTILGSALPSIPWEERPVGNSDVVWRYSGNPVIPRDAIPTSNSIFNSAVVPF CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHCCCCCCC KDGFAGVFRCDDKRRVMNIHRGFSKDAVNWEIDPKPLEFSGDPEVTAFEYRYDPRVCWIE CCCCCEEEEECCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEECCEEEEEE DRYYVTWCNGYHGPTIGVAYTYDFETFHQLENAFLPFNRNGVLFPRRINGKYAMVSRPSD CCEEEEEECCCCCCEEEEEEEECHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEECCCC NGHTPFGDIYYSESPDMEHWGKHRFVMGTKGGWQSTKIGAGPTPIETTEGWLLFYHGVLT CCCCCCCEEEECCCCCHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHH SCNGFVYSFGAALLDLEQPWKVIYRTAPYLLAPQTLYECVGDVPNVAFPCAALTDAATGR CCCCHHEEHHHHHCCCCCCHHHHHHCCCCEECHHHHHHHHCCCCCCCCCHHHHHCCCCCE IAIYYGCADTVTGIAFAQVDEVLSFLKANSEI EEEEECCHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA