Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159897418

Identifier: 159897418

GI number: 159897418

Start: 1015172

End: 1016947

Strand: Reverse

Name: 159897418

Synonym: Haur_0889

Alternate gene names: NA

Gene position: 1016947-1015172 (Counterclockwise)

Preceding gene: 159897419

Following gene: 159897417

Centisome position: 16.02

GC content: 49.77

Gene sequence:

>1776_bases
ATGCGTCGATGGCTCTATCGCTTACATCTATGGTTGGTTCTGCTGCTGTTGATTGCGGCCTGTACCCAAGTTGGCGAATC
GGGCGGCAACCAAACGCTTAGCTTACGTACCCTAACCGGCAATGCTGCGGTTTTTGGCACGATTGAGTTGGCGATTGATA
CCACTATCACCGTCGCCAATCCTTACGATCCAAATCAAATCGATCTGATGGTGAGTTTTATCTCAGCAACCGGCCAAATC
TATCGTGTGCCAGCCTTTTGGTATCAAGATTTTGATCAACTTTCGCTGCAACCCAAAGGCAACCCTGAGTGGCGGGTGCG
TTTCACGCCGAGCGAACCAGGTGCATGGCAAGTCAAGGCCGAGCTAGCCAAGCCAGCGCTGAGCAGCGACGTGATCACGA
TTGAAGTTTCAGCGAATAAGCAATCGCCAGGCTTTGTACGGATCAACACCAGCAATCCGCGCTATTTCGCTCGCCAAGAT
GGCACCTTCTTTATGCCAATCGGCCTCAATTTGGGCTGGTCAACCCAACAAGGCACGGGCATTTTGCGCGAATATGAACA
CTGGTTTGATCAATTAAGCAAAAACGGTGGCAATATTGCGCGAATTTGGATGGCCTCGTGGTCGTTTGGCATCGAATGGC
AAGATACCGGTTTAGGCGATTATTCCAAACGCATGCAACAAGCATGGATGCTTGACCAAATTTTCAAATTGGCCGAACAG
CGCAACATCACAATTATGTTAACCCTTATCAACCATGGCGCATTTAGTACCAGCACTGATTCAGAGTGGGCTAGTAATCC
GTATAACGCTGCGAATGGCGGGCCAATTGCCGAGCCACGCTTGTTTGCCACCGATATTCAATCGCGTGAAGTGTTCAAGC
ATCGAGTGCGTTACATTGCGGCTCGTTGGGCACATTCGCCTAGCCTATTCGCATGGGAATGGTGGAACGAAGCCAACTGG
ACACCAATTAATGATGCTTTGATGCAACCATGGATCAGCGAAATGACCCGTCATTTGGCGCAGTTTGATCCCTATCAACA
TTTGGTTTCAACCAGCTATGCCAGCAATACCAGTACCTCGATGTGGGTACAACCAGAGATCAACTTCACCCAACACCACG
ATTATACAGGCCGCGATTTAGGACAAGCCTTCCCCTTGGTGATCCGTGAGTTGAATGCGGCAGCACCACAAAAACCAGCC
TTGGTCAGCGAACTTGGCTATGCTGGCACTGGGCGCGACGAGGTAATCAATCGGGATGTTTGGCAGTTTCATCAAGGCTT
GTGGGCTGCACCATTCAGTGGCTTTGCTGGCAGCGGCATGTATTGGTGGTGGGACACCTTGGTCGATCCCGACAACTTGT
GGAGCGAATACAGCAAGTTGGCCGAATTTTTCAAAGACCAAGATCTCACGATCTACAACCCAGTTGTGGCTCAAATTTCG
CCGTTGAAGGCGCGGGCCTTAGCCTTACAAACGAAATCGCAGGCGTTAGTCTGGGTGCGCAGCAACGAATATGAGCCTGA
AGCATTAACCAAAGCCTATGAAGAAGCGCTCAAAAAACGTGAATTTAACGATACATGGGAATATGTACCGCCGACTTACG
CCGATTTGACGCTTAAGTTGAATGGGCTAGAAGCCGGAAACTACCAAGCAACCTGGTACGACCCGCAAACTGGCACATGG
TCGCAACCAACGACGGTAACCCTTGAAGCTAACCAATCCAGTATTGCAGTTCCAAGCTTCAACTACGATTTAGCCTTGAA
ATTAGTCAAGCAATAA

Upstream 100 bases:

>100_bases
AAGATGCTTTAGATCAAGCAGCGGAGATCATGAATCGCAATTTACAACCATAGGGGAGTAATTGCGCCACTGCGGGATTT
GAAGTTGTACAGGGGGAATT

Downstream 100 bases:

>100_bases
ACCTTATTGCGGGGCAAACATTGGCCATGTAGGTGTTGGGTCGTCGCTATCAGTTGCACAATTATCAATCAATGGCGTGC
GTGATAGTGGCGCTCAGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 591; Mature: 591

Protein sequence:

>591_residues
MRRWLYRLHLWLVLLLLIAACTQVGESGGNQTLSLRTLTGNAAVFGTIELAIDTTITVANPYDPNQIDLMVSFISATGQI
YRVPAFWYQDFDQLSLQPKGNPEWRVRFTPSEPGAWQVKAELAKPALSSDVITIEVSANKQSPGFVRINTSNPRYFARQD
GTFFMPIGLNLGWSTQQGTGILREYEHWFDQLSKNGGNIARIWMASWSFGIEWQDTGLGDYSKRMQQAWMLDQIFKLAEQ
RNITIMLTLINHGAFSTSTDSEWASNPYNAANGGPIAEPRLFATDIQSREVFKHRVRYIAARWAHSPSLFAWEWWNEANW
TPINDALMQPWISEMTRHLAQFDPYQHLVSTSYASNTSTSMWVQPEINFTQHHDYTGRDLGQAFPLVIRELNAAAPQKPA
LVSELGYAGTGRDEVINRDVWQFHQGLWAAPFSGFAGSGMYWWWDTLVDPDNLWSEYSKLAEFFKDQDLTIYNPVVAQIS
PLKARALALQTKSQALVWVRSNEYEPEALTKAYEEALKKREFNDTWEYVPPTYADLTLKLNGLEAGNYQATWYDPQTGTW
SQPTTVTLEANQSSIAVPSFNYDLALKLVKQ

Sequences:

>Translated_591_residues
MRRWLYRLHLWLVLLLLIAACTQVGESGGNQTLSLRTLTGNAAVFGTIELAIDTTITVANPYDPNQIDLMVSFISATGQI
YRVPAFWYQDFDQLSLQPKGNPEWRVRFTPSEPGAWQVKAELAKPALSSDVITIEVSANKQSPGFVRINTSNPRYFARQD
GTFFMPIGLNLGWSTQQGTGILREYEHWFDQLSKNGGNIARIWMASWSFGIEWQDTGLGDYSKRMQQAWMLDQIFKLAEQ
RNITIMLTLINHGAFSTSTDSEWASNPYNAANGGPIAEPRLFATDIQSREVFKHRVRYIAARWAHSPSLFAWEWWNEANW
TPINDALMQPWISEMTRHLAQFDPYQHLVSTSYASNTSTSMWVQPEINFTQHHDYTGRDLGQAFPLVIRELNAAAPQKPA
LVSELGYAGTGRDEVINRDVWQFHQGLWAAPFSGFAGSGMYWWWDTLVDPDNLWSEYSKLAEFFKDQDLTIYNPVVAQIS
PLKARALALQTKSQALVWVRSNEYEPEALTKAYEEALKKREFNDTWEYVPPTYADLTLKLNGLEAGNYQATWYDPQTGTW
SQPTTVTLEANQSSIAVPSFNYDLALKLVKQ
>Mature_591_residues
MRRWLYRLHLWLVLLLLIAACTQVGESGGNQTLSLRTLTGNAAVFGTIELAIDTTITVANPYDPNQIDLMVSFISATGQI
YRVPAFWYQDFDQLSLQPKGNPEWRVRFTPSEPGAWQVKAELAKPALSSDVITIEVSANKQSPGFVRINTSNPRYFARQD
GTFFMPIGLNLGWSTQQGTGILREYEHWFDQLSKNGGNIARIWMASWSFGIEWQDTGLGDYSKRMQQAWMLDQIFKLAEQ
RNITIMLTLINHGAFSTSTDSEWASNPYNAANGGPIAEPRLFATDIQSREVFKHRVRYIAARWAHSPSLFAWEWWNEANW
TPINDALMQPWISEMTRHLAQFDPYQHLVSTSYASNTSTSMWVQPEINFTQHHDYTGRDLGQAFPLVIRELNAAAPQKPA
LVSELGYAGTGRDEVINRDVWQFHQGLWAAPFSGFAGSGMYWWWDTLVDPDNLWSEYSKLAEFFKDQDLTIYNPVVAQIS
PLKARALALQTKSQALVWVRSNEYEPEALTKAYEEALKKREFNDTWEYVPPTYADLTLKLNGLEAGNYQATWYDPQTGTW
SQPTTVTLEANQSSIAVPSFNYDLALKLVKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67310; Mature: 67310

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRWLYRLHLWLVLLLLIAACTQVGESGGNQTLSLRTLTGNAAVFGTIELAIDTTITVAN
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCEEEEEEEEEEEEEEEEEEC
PYDPNQIDLMVSFISATGQIYRVPAFWYQDFDQLSLQPKGNPEWRVRFTPSEPGAWQVKA
CCCCCHHHHHHEEHHCCCEEEEECHHHHCCHHHEECCCCCCCCEEEEECCCCCCCEEEEH
ELAKPALSSDVITIEVSANKQSPGFVRINTSNPRYFARQDGTFFMPIGLNLGWSTQQGTG
HHCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCEEEECCCCEEEEECCCCCCCCCCCCH
ILREYEHWFDQLSKNGGNIARIWMASWSFGIEWQDTGLGDYSKRMQQAWMLDQIFKLAEQ
HHHHHHHHHHHHHCCCCCEEEEEEEECEECCEEECCCCCHHHHHHHHHHHHHHHHHHHHC
RNITIMLTLINHGAFSTSTDSEWASNPYNAANGGPIAEPRLFATDIQSREVFKHRVRYIA
CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHH
ARWAHSPSLFAWEWWNEANWTPINDALMQPWISEMTRHLAQFDPYQHLVSTSYASNTSTS
HHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCE
MWVQPEINFTQHHDYTGRDLGQAFPLVIRELNAAAPQKPALVSELGYAGTGRDEVINRDV
EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCHHHHHCCHH
WQFHQGLWAAPFSGFAGSGMYWWWDTLVDPDNLWSEYSKLAEFFKDQDLTIYNPVVAQIS
HHHHCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEECCHHHHCC
PLKARALALQTKSQALVWVRSNEYEPEALTKAYEEALKKREFNDTWEYVPPTYADLTLKL
CCHHHEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEE
NGLEAGNYQATWYDPQTGTWSQPTTVTLEANQSSIAVPSFNYDLALKLVKQ
ECCCCCCEEEEEECCCCCCCCCCEEEEEECCCCEEECCCCCHHHHEEEECC
>Mature Secondary Structure
MRRWLYRLHLWLVLLLLIAACTQVGESGGNQTLSLRTLTGNAAVFGTIELAIDTTITVAN
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCEEEEEEEEEEEEEEEEEEC
PYDPNQIDLMVSFISATGQIYRVPAFWYQDFDQLSLQPKGNPEWRVRFTPSEPGAWQVKA
CCCCCHHHHHHEEHHCCCEEEEECHHHHCCHHHEECCCCCCCCEEEEECCCCCCCEEEEH
ELAKPALSSDVITIEVSANKQSPGFVRINTSNPRYFARQDGTFFMPIGLNLGWSTQQGTG
HHCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCEEEECCCCEEEEECCCCCCCCCCCCH
ILREYEHWFDQLSKNGGNIARIWMASWSFGIEWQDTGLGDYSKRMQQAWMLDQIFKLAEQ
HHHHHHHHHHHHHCCCCCEEEEEEEECEECCEEECCCCCHHHHHHHHHHHHHHHHHHHHC
RNITIMLTLINHGAFSTSTDSEWASNPYNAANGGPIAEPRLFATDIQSREVFKHRVRYIA
CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHH
ARWAHSPSLFAWEWWNEANWTPINDALMQPWISEMTRHLAQFDPYQHLVSTSYASNTSTS
HHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCE
MWVQPEINFTQHHDYTGRDLGQAFPLVIRELNAAAPQKPALVSELGYAGTGRDEVINRDV
EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCHHHHHCCHH
WQFHQGLWAAPFSGFAGSGMYWWWDTLVDPDNLWSEYSKLAEFFKDQDLTIYNPVVAQIS
HHHHCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEECCHHHHCC
PLKARALALQTKSQALVWVRSNEYEPEALTKAYEEALKKREFNDTWEYVPPTYADLTLKL
CCHHHEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEE
NGLEAGNYQATWYDPQTGTWSQPTTVTLEANQSSIAVPSFNYDLALKLVKQ
ECCCCCCEEEEEECCCCCCCCCCEEEEEECCCCEEECCCCCHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA