| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897418
Identifier: 159897418
GI number: 159897418
Start: 1015172
End: 1016947
Strand: Reverse
Name: 159897418
Synonym: Haur_0889
Alternate gene names: NA
Gene position: 1016947-1015172 (Counterclockwise)
Preceding gene: 159897419
Following gene: 159897417
Centisome position: 16.02
GC content: 49.77
Gene sequence:
>1776_bases ATGCGTCGATGGCTCTATCGCTTACATCTATGGTTGGTTCTGCTGCTGTTGATTGCGGCCTGTACCCAAGTTGGCGAATC GGGCGGCAACCAAACGCTTAGCTTACGTACCCTAACCGGCAATGCTGCGGTTTTTGGCACGATTGAGTTGGCGATTGATA CCACTATCACCGTCGCCAATCCTTACGATCCAAATCAAATCGATCTGATGGTGAGTTTTATCTCAGCAACCGGCCAAATC TATCGTGTGCCAGCCTTTTGGTATCAAGATTTTGATCAACTTTCGCTGCAACCCAAAGGCAACCCTGAGTGGCGGGTGCG TTTCACGCCGAGCGAACCAGGTGCATGGCAAGTCAAGGCCGAGCTAGCCAAGCCAGCGCTGAGCAGCGACGTGATCACGA TTGAAGTTTCAGCGAATAAGCAATCGCCAGGCTTTGTACGGATCAACACCAGCAATCCGCGCTATTTCGCTCGCCAAGAT GGCACCTTCTTTATGCCAATCGGCCTCAATTTGGGCTGGTCAACCCAACAAGGCACGGGCATTTTGCGCGAATATGAACA CTGGTTTGATCAATTAAGCAAAAACGGTGGCAATATTGCGCGAATTTGGATGGCCTCGTGGTCGTTTGGCATCGAATGGC AAGATACCGGTTTAGGCGATTATTCCAAACGCATGCAACAAGCATGGATGCTTGACCAAATTTTCAAATTGGCCGAACAG CGCAACATCACAATTATGTTAACCCTTATCAACCATGGCGCATTTAGTACCAGCACTGATTCAGAGTGGGCTAGTAATCC GTATAACGCTGCGAATGGCGGGCCAATTGCCGAGCCACGCTTGTTTGCCACCGATATTCAATCGCGTGAAGTGTTCAAGC ATCGAGTGCGTTACATTGCGGCTCGTTGGGCACATTCGCCTAGCCTATTCGCATGGGAATGGTGGAACGAAGCCAACTGG ACACCAATTAATGATGCTTTGATGCAACCATGGATCAGCGAAATGACCCGTCATTTGGCGCAGTTTGATCCCTATCAACA TTTGGTTTCAACCAGCTATGCCAGCAATACCAGTACCTCGATGTGGGTACAACCAGAGATCAACTTCACCCAACACCACG ATTATACAGGCCGCGATTTAGGACAAGCCTTCCCCTTGGTGATCCGTGAGTTGAATGCGGCAGCACCACAAAAACCAGCC TTGGTCAGCGAACTTGGCTATGCTGGCACTGGGCGCGACGAGGTAATCAATCGGGATGTTTGGCAGTTTCATCAAGGCTT GTGGGCTGCACCATTCAGTGGCTTTGCTGGCAGCGGCATGTATTGGTGGTGGGACACCTTGGTCGATCCCGACAACTTGT GGAGCGAATACAGCAAGTTGGCCGAATTTTTCAAAGACCAAGATCTCACGATCTACAACCCAGTTGTGGCTCAAATTTCG CCGTTGAAGGCGCGGGCCTTAGCCTTACAAACGAAATCGCAGGCGTTAGTCTGGGTGCGCAGCAACGAATATGAGCCTGA AGCATTAACCAAAGCCTATGAAGAAGCGCTCAAAAAACGTGAATTTAACGATACATGGGAATATGTACCGCCGACTTACG CCGATTTGACGCTTAAGTTGAATGGGCTAGAAGCCGGAAACTACCAAGCAACCTGGTACGACCCGCAAACTGGCACATGG TCGCAACCAACGACGGTAACCCTTGAAGCTAACCAATCCAGTATTGCAGTTCCAAGCTTCAACTACGATTTAGCCTTGAA ATTAGTCAAGCAATAA
Upstream 100 bases:
>100_bases AAGATGCTTTAGATCAAGCAGCGGAGATCATGAATCGCAATTTACAACCATAGGGGAGTAATTGCGCCACTGCGGGATTT GAAGTTGTACAGGGGGAATT
Downstream 100 bases:
>100_bases ACCTTATTGCGGGGCAAACATTGGCCATGTAGGTGTTGGGTCGTCGCTATCAGTTGCACAATTATCAATCAATGGCGTGC GTGATAGTGGCGCTCAGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 591; Mature: 591
Protein sequence:
>591_residues MRRWLYRLHLWLVLLLLIAACTQVGESGGNQTLSLRTLTGNAAVFGTIELAIDTTITVANPYDPNQIDLMVSFISATGQI YRVPAFWYQDFDQLSLQPKGNPEWRVRFTPSEPGAWQVKAELAKPALSSDVITIEVSANKQSPGFVRINTSNPRYFARQD GTFFMPIGLNLGWSTQQGTGILREYEHWFDQLSKNGGNIARIWMASWSFGIEWQDTGLGDYSKRMQQAWMLDQIFKLAEQ RNITIMLTLINHGAFSTSTDSEWASNPYNAANGGPIAEPRLFATDIQSREVFKHRVRYIAARWAHSPSLFAWEWWNEANW TPINDALMQPWISEMTRHLAQFDPYQHLVSTSYASNTSTSMWVQPEINFTQHHDYTGRDLGQAFPLVIRELNAAAPQKPA LVSELGYAGTGRDEVINRDVWQFHQGLWAAPFSGFAGSGMYWWWDTLVDPDNLWSEYSKLAEFFKDQDLTIYNPVVAQIS PLKARALALQTKSQALVWVRSNEYEPEALTKAYEEALKKREFNDTWEYVPPTYADLTLKLNGLEAGNYQATWYDPQTGTW SQPTTVTLEANQSSIAVPSFNYDLALKLVKQ
Sequences:
>Translated_591_residues MRRWLYRLHLWLVLLLLIAACTQVGESGGNQTLSLRTLTGNAAVFGTIELAIDTTITVANPYDPNQIDLMVSFISATGQI YRVPAFWYQDFDQLSLQPKGNPEWRVRFTPSEPGAWQVKAELAKPALSSDVITIEVSANKQSPGFVRINTSNPRYFARQD GTFFMPIGLNLGWSTQQGTGILREYEHWFDQLSKNGGNIARIWMASWSFGIEWQDTGLGDYSKRMQQAWMLDQIFKLAEQ RNITIMLTLINHGAFSTSTDSEWASNPYNAANGGPIAEPRLFATDIQSREVFKHRVRYIAARWAHSPSLFAWEWWNEANW TPINDALMQPWISEMTRHLAQFDPYQHLVSTSYASNTSTSMWVQPEINFTQHHDYTGRDLGQAFPLVIRELNAAAPQKPA LVSELGYAGTGRDEVINRDVWQFHQGLWAAPFSGFAGSGMYWWWDTLVDPDNLWSEYSKLAEFFKDQDLTIYNPVVAQIS PLKARALALQTKSQALVWVRSNEYEPEALTKAYEEALKKREFNDTWEYVPPTYADLTLKLNGLEAGNYQATWYDPQTGTW SQPTTVTLEANQSSIAVPSFNYDLALKLVKQ >Mature_591_residues MRRWLYRLHLWLVLLLLIAACTQVGESGGNQTLSLRTLTGNAAVFGTIELAIDTTITVANPYDPNQIDLMVSFISATGQI YRVPAFWYQDFDQLSLQPKGNPEWRVRFTPSEPGAWQVKAELAKPALSSDVITIEVSANKQSPGFVRINTSNPRYFARQD GTFFMPIGLNLGWSTQQGTGILREYEHWFDQLSKNGGNIARIWMASWSFGIEWQDTGLGDYSKRMQQAWMLDQIFKLAEQ RNITIMLTLINHGAFSTSTDSEWASNPYNAANGGPIAEPRLFATDIQSREVFKHRVRYIAARWAHSPSLFAWEWWNEANW TPINDALMQPWISEMTRHLAQFDPYQHLVSTSYASNTSTSMWVQPEINFTQHHDYTGRDLGQAFPLVIRELNAAAPQKPA LVSELGYAGTGRDEVINRDVWQFHQGLWAAPFSGFAGSGMYWWWDTLVDPDNLWSEYSKLAEFFKDQDLTIYNPVVAQIS PLKARALALQTKSQALVWVRSNEYEPEALTKAYEEALKKREFNDTWEYVPPTYADLTLKLNGLEAGNYQATWYDPQTGTW SQPTTVTLEANQSSIAVPSFNYDLALKLVKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67310; Mature: 67310
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRWLYRLHLWLVLLLLIAACTQVGESGGNQTLSLRTLTGNAAVFGTIELAIDTTITVAN CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCEEEEEEEEEEEEEEEEEEC PYDPNQIDLMVSFISATGQIYRVPAFWYQDFDQLSLQPKGNPEWRVRFTPSEPGAWQVKA CCCCCHHHHHHEEHHCCCEEEEECHHHHCCHHHEECCCCCCCCEEEEECCCCCCCEEEEH ELAKPALSSDVITIEVSANKQSPGFVRINTSNPRYFARQDGTFFMPIGLNLGWSTQQGTG HHCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCEEEECCCCEEEEECCCCCCCCCCCCH ILREYEHWFDQLSKNGGNIARIWMASWSFGIEWQDTGLGDYSKRMQQAWMLDQIFKLAEQ HHHHHHHHHHHHHCCCCCEEEEEEEECEECCEEECCCCCHHHHHHHHHHHHHHHHHHHHC RNITIMLTLINHGAFSTSTDSEWASNPYNAANGGPIAEPRLFATDIQSREVFKHRVRYIA CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHH ARWAHSPSLFAWEWWNEANWTPINDALMQPWISEMTRHLAQFDPYQHLVSTSYASNTSTS HHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCE MWVQPEINFTQHHDYTGRDLGQAFPLVIRELNAAAPQKPALVSELGYAGTGRDEVINRDV EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCHHHHHCCHH WQFHQGLWAAPFSGFAGSGMYWWWDTLVDPDNLWSEYSKLAEFFKDQDLTIYNPVVAQIS HHHHCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEECCHHHHCC PLKARALALQTKSQALVWVRSNEYEPEALTKAYEEALKKREFNDTWEYVPPTYADLTLKL CCHHHEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEE NGLEAGNYQATWYDPQTGTWSQPTTVTLEANQSSIAVPSFNYDLALKLVKQ ECCCCCCEEEEEECCCCCCCCCCEEEEEECCCCEEECCCCCHHHHEEEECC >Mature Secondary Structure MRRWLYRLHLWLVLLLLIAACTQVGESGGNQTLSLRTLTGNAAVFGTIELAIDTTITVAN CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCEEEEEEEEEEEEEEEEEEC PYDPNQIDLMVSFISATGQIYRVPAFWYQDFDQLSLQPKGNPEWRVRFTPSEPGAWQVKA CCCCCHHHHHHEEHHCCCEEEEECHHHHCCHHHEECCCCCCCCEEEEECCCCCCCEEEEH ELAKPALSSDVITIEVSANKQSPGFVRINTSNPRYFARQDGTFFMPIGLNLGWSTQQGTG HHCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCEEEECCCCEEEEECCCCCCCCCCCCH ILREYEHWFDQLSKNGGNIARIWMASWSFGIEWQDTGLGDYSKRMQQAWMLDQIFKLAEQ HHHHHHHHHHHHHCCCCCEEEEEEEECEECCEEECCCCCHHHHHHHHHHHHHHHHHHHHC RNITIMLTLINHGAFSTSTDSEWASNPYNAANGGPIAEPRLFATDIQSREVFKHRVRYIA CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHH ARWAHSPSLFAWEWWNEANWTPINDALMQPWISEMTRHLAQFDPYQHLVSTSYASNTSTS HHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCE MWVQPEINFTQHHDYTGRDLGQAFPLVIRELNAAAPQKPALVSELGYAGTGRDEVINRDV EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCHHHHHCCHH WQFHQGLWAAPFSGFAGSGMYWWWDTLVDPDNLWSEYSKLAEFFKDQDLTIYNPVVAQIS HHHHCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEECCHHHHCC PLKARALALQTKSQALVWVRSNEYEPEALTKAYEEALKKREFNDTWEYVPPTYADLTLKL CCHHHEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEE NGLEAGNYQATWYDPQTGTWSQPTTVTLEANQSSIAVPSFNYDLALKLVKQ ECCCCCCEEEEEECCCCCCCCCCEEEEEECCCCEEECCCCCHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA