Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158313679

Identifier: 158313679

GI number: 158313679

Start: 2211851

End: 2212291

Strand: Direct

Name: 158313679

Synonym: Franean1_1843

Alternate gene names: NA

Gene position: 2211851-2212291 (Clockwise)

Preceding gene: 158313678

Following gene: 158313680

Centisome position: 24.63

GC content: 74.6

Gene sequence:

>441_bases
GTGAGCCGCCTCGGTCACTTCGGCGGTCTGGGCCACTTCAGCTACCTCGCGGTGCTGCTGGGGTGCCTGGTGGCGACGGC
GCCGCTGGAGATCCTGCTGCGGACGAGGGTGTATGCGCGCCCCCGCCGCCTCCTGCTGTCGGTGGCGCCGGTGCTGGTCG
TCTTCGTCGGGTGGGATCTGTACGCGATCGCGCGCGGCCACTGGGAGTTCGACCCGCGGCGCACCACCGGGGTGCTGCTG
CCCGGCGGCCTCCCGCTCGACGAGGTCCTCTTCTTCGTCGTGGTCCCCGTGTGTGCCGTGCTCGCGCTGGAGGCCGTGCG
TGCCGTCACCGGCTGGCAGGCGGGCGACGAGCGGGCTGGCGCCGAACAGGTGGACGGCGAGCAGGTGGACGGCGAGCGTG
CCGGCGACAGGCCGGCGGACGGGGCCCGCGGGCCGGGATGA

Upstream 100 bases:

>100_bases
GTGGTGGTGCGGGGCATCGCCGAGGCCGCGGATCCGGGAGCCGCCGCCACCGCGCTCGCCGAACGCCTGCGCTCGGCCTG
ACCGGGGGAGGGCGTCCGCG

Downstream 100 bases:

>100_bases
GCTACACCGCGCTGGCCGTCGTGGGCGTCGCCGTGAGCGTGCTGCTGGACCTGCGGATCCTGCGTACCCGGCTGCTCACC
CGCCGGCTGTTCTGGACGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MSRLGHFGGLGHFSYLAVLLGCLVATAPLEILLRTRVYARPRRLLLSVAPVLVVFVGWDLYAIARGHWEFDPRRTTGVLL
PGGLPLDEVLFFVVVPVCAVLALEAVRAVTGWQAGDERAGAEQVDGEQVDGERAGDRPADGARGPG

Sequences:

>Translated_146_residues
MSRLGHFGGLGHFSYLAVLLGCLVATAPLEILLRTRVYARPRRLLLSVAPVLVVFVGWDLYAIARGHWEFDPRRTTGVLL
PGGLPLDEVLFFVVVPVCAVLALEAVRAVTGWQAGDERAGAEQVDGEQVDGERAGDRPADGARGPG
>Mature_145_residues
SRLGHFGGLGHFSYLAVLLGCLVATAPLEILLRTRVYARPRRLLLSVAPVLVVFVGWDLYAIARGHWEFDPRRTTGVLLP
GGLPLDEVLFFVVVPVCAVLALEAVRAVTGWQAGDERAGAEQVDGEQVDGERAGDRPADGARGPG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15642; Mature: 15511

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLGHFGGLGHFSYLAVLLGCLVATAPLEILLRTRVYARPRRLLLSVAPVLVVFVGWDL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YAIARGHWEFDPRRTTGVLLPGGLPLDEVLFFVVVPVCAVLALEAVRAVTGWQAGDERAG
HHHHCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
AEQVDGEQVDGERAGDRPADGARGPG
CHHCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SRLGHFGGLGHFSYLAVLLGCLVATAPLEILLRTRVYARPRRLLLSVAPVLVVFVGWDL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YAIARGHWEFDPRRTTGVLLPGGLPLDEVLFFVVVPVCAVLALEAVRAVTGWQAGDERAG
HHHHCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
AEQVDGEQVDGERAGDRPADGARGPG
CHHCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA