| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is rstB [H]
Identifier: 157960705
GI number: 157960705
Start: 1075908
End: 1077176
Strand: Reverse
Name: rstB [H]
Synonym: Spea_0877
Alternate gene names: 157960705
Gene position: 1077176-1075908 (Counterclockwise)
Preceding gene: 157960706
Following gene: 157960703
Centisome position: 20.82
GC content: 45.39
Gene sequence:
>1269_bases ATGAAACGTCTTTTTATTAGCCTCTATCTTCTGCTCAGCCTTGGCTTTTTAGGCATCGGCTGGACTCTGGATAATTTGTG GCAAAACAATGTTGACGAAAAAGGTGCACTCGATGCACCTTTAGTCGCTTTAGCGCAAGTATTAGCGGCCCTCCCTCCAG CCGAACGTCAGGCGATGCTAGATTCCATCGAAGCCGACCCGGACTTTGCTCTTACCCTACTCGATTCTGATCAGGTGGCA TTTTCAAGCGAACAACTCGTTCAAGCCAATAAAGTGATTGCGACCCCCTATGATATCAACCACGAGCTGCAATTTGTGGC TGTGGGTGAGCAAGTTTTAATGGCTGGCCCTATAGCGATTGACCCTGCAGCCAGTTTAAGAAATATCTACAATATCTTTT TCTATCTGTTGCTAGCGTTTATTGCACTCATTTGGGTCTGGCCATTATCTAAAGATCTTAAAACCTTACGTAAGGCCACC AAGGAGTTTGGCCAAGCCAATTGGAACACTCGAATAAAGTTACCCAAACGCTCGCAAGTATTGCCGTTAGCAAATACCTT TAACGATATGGCTGCTCATATCAGTGCGCTTATCGAAAATCAGAAGCATCTCTCTAATGCCGTTTCACACGAAATCCGCA CCCCATTAGCGCGGCTTAAATTCGCCTTAGCCCTATTACCTCAGTACTGTCAGCCAAATTCTGATGAGGCAAATCGTCAG CGCTTTTTAGATGAGATGAAGCTCGATATCAAAGAGATGGAAAACCTGCTACAAGAGTTACTCACATATGCCAGTCTCGA GACTCAGAGGGAGTCACTCAACTTTGAGCGCTGTGATTTAAACAGCCTAGTCGCACAAACGATAAGACGACTCCAAAGCC ACAATCCGACTCCTATCGTGCTCGATAAACCAGAGGAAACGATCTACCTAATCGCCGAGCCATCGCTGGTCGAGCGTGCA CTACAGAATCTCATCACTAACGCTCAAAGGTTCTCGACTGACGATATTAAAGTCAAAATATCTCAAGATACAGACGGGAT AAGGCTGTCAGTTACCGATCACGGTGAGGGGATTTTAGAGGAAGATCAGAGCAAGATATTTGAGCCATTTTATCGCAGTA GCAGCAGTAAAAATGGTAATAAGGGTCACGGCTTAGGCTTAGCAATAATCAAGCGGATCATGGACAGACACCATGCCGAG GTCAGTTTACAAAGCCGGCCTGGCTTTACTCAATTTACCTTATTCTGGCCTAAGACAAAGGAAGATTAA
Upstream 100 bases:
>100_bases CGATAATATTGAAACGCCATTTAGAATTAAGACGGTATGGGGCCAAGGTTACCTATTCGCACCAGAAGCATGGAATAACT AAACCAGCGCATTCATAGAG
Downstream 100 bases:
>100_bases TCTAGCTTAAACTCCTCTAGATTGTCATGTGTCTCTGCCGTTAATTCATCGCCAAATTCAAGACTGGTATTGGCTTGCGC CCTTGCATCTAATAATTGCG
Product: histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MKRLFISLYLLLSLGFLGIGWTLDNLWQNNVDEKGALDAPLVALAQVLAALPPAERQAMLDSIEADPDFALTLLDSDQVA FSSEQLVQANKVIATPYDINHELQFVAVGEQVLMAGPIAIDPAASLRNIYNIFFYLLLAFIALIWVWPLSKDLKTLRKAT KEFGQANWNTRIKLPKRSQVLPLANTFNDMAAHISALIENQKHLSNAVSHEIRTPLARLKFALALLPQYCQPNSDEANRQ RFLDEMKLDIKEMENLLQELLTYASLETQRESLNFERCDLNSLVAQTIRRLQSHNPTPIVLDKPEETIYLIAEPSLVERA LQNLITNAQRFSTDDIKVKISQDTDGIRLSVTDHGEGILEEDQSKIFEPFYRSSSSKNGNKGHGLGLAIIKRIMDRHHAE VSLQSRPGFTQFTLFWPKTKED
Sequences:
>Translated_422_residues MKRLFISLYLLLSLGFLGIGWTLDNLWQNNVDEKGALDAPLVALAQVLAALPPAERQAMLDSIEADPDFALTLLDSDQVA FSSEQLVQANKVIATPYDINHELQFVAVGEQVLMAGPIAIDPAASLRNIYNIFFYLLLAFIALIWVWPLSKDLKTLRKAT KEFGQANWNTRIKLPKRSQVLPLANTFNDMAAHISALIENQKHLSNAVSHEIRTPLARLKFALALLPQYCQPNSDEANRQ RFLDEMKLDIKEMENLLQELLTYASLETQRESLNFERCDLNSLVAQTIRRLQSHNPTPIVLDKPEETIYLIAEPSLVERA LQNLITNAQRFSTDDIKVKISQDTDGIRLSVTDHGEGILEEDQSKIFEPFYRSSSSKNGNKGHGLGLAIIKRIMDRHHAE VSLQSRPGFTQFTLFWPKTKED >Mature_422_residues MKRLFISLYLLLSLGFLGIGWTLDNLWQNNVDEKGALDAPLVALAQVLAALPPAERQAMLDSIEADPDFALTLLDSDQVA FSSEQLVQANKVIATPYDINHELQFVAVGEQVLMAGPIAIDPAASLRNIYNIFFYLLLAFIALIWVWPLSKDLKTLRKAT KEFGQANWNTRIKLPKRSQVLPLANTFNDMAAHISALIENQKHLSNAVSHEIRTPLARLKFALALLPQYCQPNSDEANRQ RFLDEMKLDIKEMENLLQELLTYASLETQRESLNFERCDLNSLVAQTIRRLQSHNPTPIVLDKPEETIYLIAEPSLVERA LQNLITNAQRFSTDDIKVKISQDTDGIRLSVTDHGEGILEEDQSKIFEPFYRSSSSKNGNKGHGLGLAIIKRIMDRHHAE VSLQSRPGFTQFTLFWPKTKED
Specific function: Member of the two-component regulatory system rstB/rstA. RstB functions as a membrane-associated protein kinase that phosphorylates rstA (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1787894, Length=432, Percent_Identity=28.9351851851852, Blast_Score=154, Evalue=1e-38, Organism=Escherichia coli, GI1790346, Length=276, Percent_Identity=27.8985507246377, Blast_Score=112, Evalue=4e-26, Organism=Escherichia coli, GI1789808, Length=283, Percent_Identity=27.208480565371, Blast_Score=102, Evalue=5e-23, Organism=Escherichia coli, GI1790551, Length=303, Percent_Identity=27.7227722772277, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1790861, Length=207, Percent_Identity=31.8840579710145, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI1788549, Length=292, Percent_Identity=27.0547945205479, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1786600, Length=223, Percent_Identity=28.6995515695067, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1786912, Length=215, Percent_Identity=27.906976744186, Blast_Score=76, Evalue=4e-15, Organism=Escherichia coli, GI145693157, Length=255, Percent_Identity=25.0980392156863, Blast_Score=76, Evalue=5e-15, Organism=Escherichia coli, GI1790436, Length=221, Percent_Identity=29.8642533936652, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1788713, Length=225, Percent_Identity=27.1111111111111, Blast_Score=73, Evalue=4e-14, Organism=Escherichia coli, GI1788393, Length=257, Percent_Identity=21.011673151751, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI87082128, Length=221, Percent_Identity=26.6968325791855, Blast_Score=69, Evalue=6e-13, Organism=Escherichia coli, GI1786783, Length=310, Percent_Identity=24.5161290322581, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1789403, Length=228, Percent_Identity=25.4385964912281, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI48994928, Length=274, Percent_Identity=23.3576642335766, Blast_Score=63, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 47687; Mature: 47687
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLFISLYLLLSLGFLGIGWTLDNLWQNNVDEKGALDAPLVALAQVLAALPPAERQAML CHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHH DSIEADPDFALTLLDSDQVAFSSEQLVQANKVIATPYDINHELQFVAVGEQVLMAGPIAI HHCCCCCCEEEEEECCCCCCCCHHHHHHHCCEEECCCCCCCCEEEEEECCHHHEECCCCC DPAASLRNIYNIFFYLLLAFIALIWVWPLSKDLKTLRKATKEFGQANWNTRIKLPKRSQV CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCC LPLANTFNDMAAHISALIENQKHLSNAVSHEIRTPLARLKFALALLPQYCQPNSDEANRQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH RFLDEMKLDIKEMENLLQELLTYASLETQRESLNFERCDLNSLVAQTIRRLQSHNPTPIV HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEE LDKPEETIYLIAEPSLVERALQNLITNAQRFSTDDIKVKISQDTDGIRLSVTDHGEGILE EECCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCCHH EDQSKIFEPFYRSSSSKNGNKGHGLGLAIIKRIMDRHHAEVSLQSRPGFTQFTLFWPKTK HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEECCCCCCEEEEEECCCCC ED CC >Mature Secondary Structure MKRLFISLYLLLSLGFLGIGWTLDNLWQNNVDEKGALDAPLVALAQVLAALPPAERQAML CHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHH DSIEADPDFALTLLDSDQVAFSSEQLVQANKVIATPYDINHELQFVAVGEQVLMAGPIAI HHCCCCCCEEEEEECCCCCCCCHHHHHHHCCEEECCCCCCCCEEEEEECCHHHEECCCCC DPAASLRNIYNIFFYLLLAFIALIWVWPLSKDLKTLRKATKEFGQANWNTRIKLPKRSQV CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCC LPLANTFNDMAAHISALIENQKHLSNAVSHEIRTPLARLKFALALLPQYCQPNSDEANRQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH RFLDEMKLDIKEMENLLQELLTYASLETQRESLNFERCDLNSLVAQTIRRLQSHNPTPIV HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEE LDKPEETIYLIAEPSLVERALQNLITNAQRFSTDDIKVKISQDTDGIRLSVTDHGEGILE EECCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCCHH EDQSKIFEPFYRSSSSKNGNKGHGLGLAIIKRIMDRHHAEVSLQSRPGFTQFTLFWPKTK HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEECCCCCCEEEEEECCCCC ED CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503; 2646639; 1925016; 1495392 [H]