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The map label for this gene is rstA [H]

Identifier: 157960706

GI number: 157960706

Start: 1077195

End: 1077908

Strand: Reverse

Name: rstA [H]

Synonym: Spea_0878

Alternate gene names: 157960706

Gene position: 1077908-1077195 (Counterclockwise)

Preceding gene: 157960707

Following gene: 157960705

Centisome position: 20.83

GC content: 42.58

Gene sequence:

>714_bases
ATGACCAACTCTCAATCTACGCATAGAGTTTTGTTAGTTGAAGATGATATTCGTTTGGCCAATTTGATTGTCGATTTCCT
AAAATCACATGGCATGCACGTCGAAGTAGAGCGTAGAGGCGACACAGTTTTAACCCGCCTAATAAACTATAAGCCTGACA
TTATTTTGCTTGATATCATGTTGCCAGGCATGGACGGTTTAACCCTATGTGAAAAGCTACCAGACTACTTTGCCGGCCCT
ATCCTGTTAATGAGCGCCCTAGGTTCAAATGAAGACCAGATTAAGGGCTTAGAGTTAGGCGCAGATGATTATGTCGTTAA
GCCTGTCGATCCCGCTTTATTAGTTGCGCGTATCAATAATTTATTACGCCGACAAGCAAAGCCCGCACAAGTAGAGTCCC
ACTGCCTCAGCTTTGGTAAATTGAGCATAGATCCGCACACTCAAGCCATTCGTTTGGGTGAAACAGAGGTCGATCTAACT
AGTCACGAATTTGAACTACTATGGCTGCTTGCATCACAGGCAGGACAAGTAATGAGTCGTCAGTATATCTATCAATACCT
GCTCAATATCGATTTTGATGGTAAGGATAGAAAGATTGATGTGCGTATCTCTCGTCTAAGAAAGAAACTTGGCGATAATA
TTGAAACGCCATTTAGAATTAAGACGGTATGGGGCCAAGGTTACCTATTCGCACCAGAAGCATGGAATAACTAA

Upstream 100 bases:

>100_bases
AAGATACCCACGAGACACTTGCAGGTGTAAAATTAAAAGTTACACCCGCTTCTTCGCCTCAAGTTAGGCGACGATATCGC
AACCCATGGAGCTTATTCTA

Downstream 100 bases:

>100_bases
ACCAGCGCATTCATAGAGATGAAACGTCTTTTTATTAGCCTCTATCTTCTGCTCAGCCTTGGCTTTTTAGGCATCGGCTG
GACTCTGGATAATTTGTGGC

Product: two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MTNSQSTHRVLLVEDDIRLANLIVDFLKSHGMHVEVERRGDTVLTRLINYKPDIILLDIMLPGMDGLTLCEKLPDYFAGP
ILLMSALGSNEDQIKGLELGADDYVVKPVDPALLVARINNLLRRQAKPAQVESHCLSFGKLSIDPHTQAIRLGETEVDLT
SHEFELLWLLASQAGQVMSRQYIYQYLLNIDFDGKDRKIDVRISRLRKKLGDNIETPFRIKTVWGQGYLFAPEAWNN

Sequences:

>Translated_237_residues
MTNSQSTHRVLLVEDDIRLANLIVDFLKSHGMHVEVERRGDTVLTRLINYKPDIILLDIMLPGMDGLTLCEKLPDYFAGP
ILLMSALGSNEDQIKGLELGADDYVVKPVDPALLVARINNLLRRQAKPAQVESHCLSFGKLSIDPHTQAIRLGETEVDLT
SHEFELLWLLASQAGQVMSRQYIYQYLLNIDFDGKDRKIDVRISRLRKKLGDNIETPFRIKTVWGQGYLFAPEAWNN
>Mature_236_residues
TNSQSTHRVLLVEDDIRLANLIVDFLKSHGMHVEVERRGDTVLTRLINYKPDIILLDIMLPGMDGLTLCEKLPDYFAGPI
LLMSALGSNEDQIKGLELGADDYVVKPVDPALLVARINNLLRRQAKPAQVESHCLSFGKLSIDPHTQAIRLGETEVDLTS
HEFELLWLLASQAGQVMSRQYIYQYLLNIDFDGKDRKIDVRISRLRKKLGDNIETPFRIKTVWGQGYLFAPEAWNN

Specific function: Member of the two-component regulatory system rstB/rstA [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI145693140, Length=237, Percent_Identity=43.8818565400844, Blast_Score=200, Evalue=7e-53,
Organism=Escherichia coli, GI1789809, Length=236, Percent_Identity=36.0169491525424, Blast_Score=148, Evalue=4e-37,
Organism=Escherichia coli, GI1788394, Length=232, Percent_Identity=38.3620689655172, Blast_Score=137, Evalue=9e-34,
Organism=Escherichia coli, GI1786599, Length=226, Percent_Identity=33.6283185840708, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI1786784, Length=223, Percent_Identity=36.322869955157, Blast_Score=123, Evalue=9e-30,
Organism=Escherichia coli, GI87082012, Length=225, Percent_Identity=33.7777777777778, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI2367329, Length=228, Percent_Identity=37.280701754386, Blast_Score=120, Evalue=8e-29,
Organism=Escherichia coli, GI1790860, Length=220, Percent_Identity=36.3636363636364, Blast_Score=117, Evalue=5e-28,
Organism=Escherichia coli, GI1789402, Length=221, Percent_Identity=33.0316742081448, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI1787229, Length=232, Percent_Identity=31.0344827586207, Blast_Score=104, Evalue=5e-24,
Organism=Escherichia coli, GI1790863, Length=234, Percent_Identity=29.4871794871795, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1786911, Length=233, Percent_Identity=31.7596566523605, Blast_Score=101, Evalue=5e-23,
Organism=Escherichia coli, GI1790552, Length=229, Percent_Identity=30.5676855895196, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI1787375, Length=226, Percent_Identity=31.4159292035398, Blast_Score=91, Evalue=5e-20,
Organism=Escherichia coli, GI1788550, Length=106, Percent_Identity=29.2452830188679, Blast_Score=64, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26912; Mature: 26781

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNSQSTHRVLLVEDDIRLANLIVDFLKSHGMHVEVERRGDTVLTRLINYKPDIILLDIM
CCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCCCEEEEEEE
LPGMDGLTLCEKLPDYFAGPILLMSALGSNEDQIKGLELGADDYVVKPVDPALLVARINN
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCEEEEECCCCEEECCCCHHHHHHHHHH
LLRRQAKPAQVESHCLSFGKLSIDPHTQAIRLGETEVDLTSHEFELLWLLASQAGQVMSR
HHHHCCCCHHHHHHHHHHCCEEECCCCCEEEECCCEEEECCCCHHHHHHHHHHHHHHHHH
QYIYQYLLNIDFDGKDRKIDVRISRLRKKLGDNIETPFRIKTVWGQGYLFAPEAWNN
HHHHHHHHHCCCCCCCCEEHHHHHHHHHHHCCCCCCCEEEEEEECCCEEECCCCCCC
>Mature Secondary Structure 
TNSQSTHRVLLVEDDIRLANLIVDFLKSHGMHVEVERRGDTVLTRLINYKPDIILLDIM
CCCCCCEEEEEEECCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCCCEEEEEEE
LPGMDGLTLCEKLPDYFAGPILLMSALGSNEDQIKGLELGADDYVVKPVDPALLVARINN
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCEEEEECCCCEEECCCCHHHHHHHHHH
LLRRQAKPAQVESHCLSFGKLSIDPHTQAIRLGETEVDLTSHEFELLWLLASQAGQVMSR
HHHHCCCCHHHHHHHHHHCCEEECCCCCEEEECCCEEEECCCCHHHHHHHHHHHHHHHHH
QYIYQYLLNIDFDGKDRKIDVRISRLRKKLGDNIETPFRIKTVWGQGYLFAPEAWNN
HHHHHHHHHCCCCCCCCEEHHHHHHHHHHHCCCCCCCEEEEEEECCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 1495392 [H]