Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157960703

Identifier: 157960703

GI number: 157960703

Start: 1074920

End: 1075474

Strand: Reverse

Name: 157960703

Synonym: Spea_0875

Alternate gene names: NA

Gene position: 1075474-1074920 (Counterclockwise)

Preceding gene: 157960705

Following gene: 157960699

Centisome position: 20.78

GC content: 44.86

Gene sequence:

>555_bases
ATGAAGATACAGCCAAGAGGCCTTTTATTCAGCCTAGTTTTGATACCGCTAGTATTACTTGTCGCTTGTAGCTCTAGTCC
TAAAAATGATTACGACCTCAATTATGACTTTTCCAGTTTAAAGAGTTTTTCACAGCTCGAACCAAGCAAGAACAGCGACC
CATTGAGCGCCAATAGAATTCAGCAGGCAATAGCCAATTCACTCACTCGCCAAGGCTTTGCAGCTCAAGCTGAGAATGGC
GATTTTACTGTAGCCTACGGTTTTAAGGTTGAAAATAAACCCAAAGATTCAGGTTTCACTATTGGCTTAGGCACAGGCTC
TTGGGGCAGCTCTGGCGGAGCAAGTATCGGCACCAGTGTCGATGTGCCTGTTGGCAGTGATACTGCCAAAATCCAAACCA
TACAGATAGATATTATCGATCCAAAAACTAATCAGCTGATCTGGCGCGGTACAGATAAGTTCAATTTCGACGATGGTGGC
GAAGCTAAGGCAGAAGAAACCAAGGCGACAGTCGCTAAGATCTTGGCACAATTCCCGCCTAAACGAGAAAGGTAA

Upstream 100 bases:

>100_bases
ATGAATGGCTAAAATAAATACAGTGATAACTATTAATATTCACTCAGTGCAGCGAAACACAGCCCTTTCATCGCACTTCA
GACATAGAGATAACAACAAT

Downstream 100 bases:

>100_bases
ACAATCACGATAAACCGAACCTCGCTCGTTCGGTTCATCACACTATTACCTCAGAGAATTATGGAAACTCGAGCGACTTT
CCTAGGCTTAACCCATTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MKIQPRGLLFSLVLIPLVLLVACSSSPKNDYDLNYDFSSLKSFSQLEPSKNSDPLSANRIQQAIANSLTRQGFAAQAENG
DFTVAYGFKVENKPKDSGFTIGLGTGSWGSSGGASIGTSVDVPVGSDTAKIQTIQIDIIDPKTNQLIWRGTDKFNFDDGG
EAKAEETKATVAKILAQFPPKRER

Sequences:

>Translated_184_residues
MKIQPRGLLFSLVLIPLVLLVACSSSPKNDYDLNYDFSSLKSFSQLEPSKNSDPLSANRIQQAIANSLTRQGFAAQAENG
DFTVAYGFKVENKPKDSGFTIGLGTGSWGSSGGASIGTSVDVPVGSDTAKIQTIQIDIIDPKTNQLIWRGTDKFNFDDGG
EAKAEETKATVAKILAQFPPKRER
>Mature_184_residues
MKIQPRGLLFSLVLIPLVLLVACSSSPKNDYDLNYDFSSLKSFSQLEPSKNSDPLSANRIQQAIANSLTRQGFAAQAENG
DFTVAYGFKVENKPKDSGFTIGLGTGSWGSSGGASIGTSVDVPVGSDTAKIQTIQIDIIDPKTNQLIWRGTDKFNFDDGG
EAKAEETKATVAKILAQFPPKRER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19803; Mature: 19803

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIQPRGLLFSLVLIPLVLLVACSSSPKNDYDLNYDFSSLKSFSQLEPSKNSDPLSANRI
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHH
QQAIANSLTRQGFAAQAENGDFTVAYGFKVENKPKDSGFTIGLGTGSWGSSGGASIGTSV
HHHHHHHHHHCCCEEECCCCCEEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCEE
DVPVGSDTAKIQTIQIDIIDPKTNQLIWRGTDKFNFDDGGEAKAEETKATVAKILAQFPP
ECCCCCCCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
KRER
CCCC
>Mature Secondary Structure
MKIQPRGLLFSLVLIPLVLLVACSSSPKNDYDLNYDFSSLKSFSQLEPSKNSDPLSANRI
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHH
QQAIANSLTRQGFAAQAENGDFTVAYGFKVENKPKDSGFTIGLGTGSWGSSGGASIGTSV
HHHHHHHHHHCCCEEECCCCCEEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCEE
DVPVGSDTAKIQTIQIDIIDPKTNQLIWRGTDKFNFDDGGEAKAEETKATVAKILAQFPP
ECCCCCCCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
KRER
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA