| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960703
Identifier: 157960703
GI number: 157960703
Start: 1074920
End: 1075474
Strand: Reverse
Name: 157960703
Synonym: Spea_0875
Alternate gene names: NA
Gene position: 1075474-1074920 (Counterclockwise)
Preceding gene: 157960705
Following gene: 157960699
Centisome position: 20.78
GC content: 44.86
Gene sequence:
>555_bases ATGAAGATACAGCCAAGAGGCCTTTTATTCAGCCTAGTTTTGATACCGCTAGTATTACTTGTCGCTTGTAGCTCTAGTCC TAAAAATGATTACGACCTCAATTATGACTTTTCCAGTTTAAAGAGTTTTTCACAGCTCGAACCAAGCAAGAACAGCGACC CATTGAGCGCCAATAGAATTCAGCAGGCAATAGCCAATTCACTCACTCGCCAAGGCTTTGCAGCTCAAGCTGAGAATGGC GATTTTACTGTAGCCTACGGTTTTAAGGTTGAAAATAAACCCAAAGATTCAGGTTTCACTATTGGCTTAGGCACAGGCTC TTGGGGCAGCTCTGGCGGAGCAAGTATCGGCACCAGTGTCGATGTGCCTGTTGGCAGTGATACTGCCAAAATCCAAACCA TACAGATAGATATTATCGATCCAAAAACTAATCAGCTGATCTGGCGCGGTACAGATAAGTTCAATTTCGACGATGGTGGC GAAGCTAAGGCAGAAGAAACCAAGGCGACAGTCGCTAAGATCTTGGCACAATTCCCGCCTAAACGAGAAAGGTAA
Upstream 100 bases:
>100_bases ATGAATGGCTAAAATAAATACAGTGATAACTATTAATATTCACTCAGTGCAGCGAAACACAGCCCTTTCATCGCACTTCA GACATAGAGATAACAACAAT
Downstream 100 bases:
>100_bases ACAATCACGATAAACCGAACCTCGCTCGTTCGGTTCATCACACTATTACCTCAGAGAATTATGGAAACTCGAGCGACTTT CCTAGGCTTAACCCATTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MKIQPRGLLFSLVLIPLVLLVACSSSPKNDYDLNYDFSSLKSFSQLEPSKNSDPLSANRIQQAIANSLTRQGFAAQAENG DFTVAYGFKVENKPKDSGFTIGLGTGSWGSSGGASIGTSVDVPVGSDTAKIQTIQIDIIDPKTNQLIWRGTDKFNFDDGG EAKAEETKATVAKILAQFPPKRER
Sequences:
>Translated_184_residues MKIQPRGLLFSLVLIPLVLLVACSSSPKNDYDLNYDFSSLKSFSQLEPSKNSDPLSANRIQQAIANSLTRQGFAAQAENG DFTVAYGFKVENKPKDSGFTIGLGTGSWGSSGGASIGTSVDVPVGSDTAKIQTIQIDIIDPKTNQLIWRGTDKFNFDDGG EAKAEETKATVAKILAQFPPKRER >Mature_184_residues MKIQPRGLLFSLVLIPLVLLVACSSSPKNDYDLNYDFSSLKSFSQLEPSKNSDPLSANRIQQAIANSLTRQGFAAQAENG DFTVAYGFKVENKPKDSGFTIGLGTGSWGSSGGASIGTSVDVPVGSDTAKIQTIQIDIIDPKTNQLIWRGTDKFNFDDGG EAKAEETKATVAKILAQFPPKRER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19803; Mature: 19803
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIQPRGLLFSLVLIPLVLLVACSSSPKNDYDLNYDFSSLKSFSQLEPSKNSDPLSANRI CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHH QQAIANSLTRQGFAAQAENGDFTVAYGFKVENKPKDSGFTIGLGTGSWGSSGGASIGTSV HHHHHHHHHHCCCEEECCCCCEEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCEE DVPVGSDTAKIQTIQIDIIDPKTNQLIWRGTDKFNFDDGGEAKAEETKATVAKILAQFPP ECCCCCCCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC KRER CCCC >Mature Secondary Structure MKIQPRGLLFSLVLIPLVLLVACSSSPKNDYDLNYDFSSLKSFSQLEPSKNSDPLSANRI CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHH QQAIANSLTRQGFAAQAENGDFTVAYGFKVENKPKDSGFTIGLGTGSWGSSGGASIGTSV HHHHHHHHHHCCCEEECCCCCEEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCEE DVPVGSDTAKIQTIQIDIIDPKTNQLIWRGTDKFNFDDGGEAKAEETKATVAKILAQFPP ECCCCCCCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC KRER CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA