Definition | Serratia proteamaculans 568 chromosome, complete genome. |
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Accession | NC_009832 |
Length | 5,448,853 |
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The map label for this gene is gltX
Identifier: 157371654
GI number: 157371654
Start: 3779962
End: 3781371
Strand: Reverse
Name: gltX
Synonym: Spro_3417
Alternate gene names: 157371654
Gene position: 3781371-3779962 (Counterclockwise)
Preceding gene: 157371655
Following gene: 157371652
Centisome position: 69.4
GC content: 56.38
Gene sequence:
>1410_bases ATGAAAATCAAAACCCGTTTTGCACCGAGCCCAACCGGCTATCTTCACGTCGGTGGCGCCCGTACTGCGCTTTACTCCTG GTTGTTCAGCCGCCATGCGGGCGGTGAGTTCGTTCTGCGTATCGAAGATACCGATCTGGAACGCTCAACCCAGGACGCGA TCGACGCAATTATGGATGGCATGAACTGGTTAAACCTGGATTGGAATGAAGGCCCGTACTTCCAGACCAAGCGTTTTGAC CGCTATAACGCGGTGATTGACGACATGCTGGTGCAGGATACCGCCTATAAATGCTATTGCTCGAAGGAACGTCTGGAAGC GCTGCGTGAAAAGCAGATGGAAAACGGCGAAAAACCGCGTTACGACGGCCACTGCCGCGACAGCCAGTGCAGCCATACCG ATGACGAGCCACACGTGGTGCGTTTCCGTAACCCGCAGGAAGGCTCGGTGATCTTCGACGACAAGATCCGCGGCCCGATC GAATTTAGCAACCAGGAGCTGGATGACCTGATCATCCGCCGCACCGACGGTTCACCAACCTATAACTTCTGCGTAGTGGT AGATGACTGGGATATGGAAATCAGCCACGTGATCCGCGGCGAAGACCACATCAACAACACCCCGCGCCAGATCAACATCC TGAAAGCGCTGGGTGCGCCGGTGCCGGAATACGCGCACGTTTCGATGATCCTCGGTGACGACGGTAAAAAACTGTCGAAA CGCCACGGTGCGGTAGGGGTGATGCAGTACCGTGACGACGGCTACCTGCCGCAGGCGCTGCTGAACTATCTGGTGCGTCT GGGCTGGTCTCATGGCGACCAGGAAATCTTCTCTATTGATGAGATGAAAGAGTTCTTTACCCTGGAAGCGATCAACAAAT CCGCCAGTGCCTTCAATACCGAGAAGTTGCAGTGGCTGAACCACCATTACATTAACCATATGCCGGCCGAAGAAGTGGCA GTGCACCTGGCGTGGCATGTTGAGCAACTGGGTATCGAGACCCGCAATGGCCCTGAGCTGAAAGATATCGTTAAGCTGCT GGGCGAGCGCTGCAAAACGCTCAAGGAAATGGCCGAGTCTTGCCGTTACTTCTACGAAGACTTCAGCGAGTTCGACGCTG ACGCTGCCAAGAAACACCTGCGTCCGGTCGCTCGTCAGCCACTGGAAGCGGTGCGCGCCAAGCTGGCCGCTATCACTGCC TGGACGCCGGAAAACGTGCATGACGCCATTCAGGGCACGGCAGATGAGCTGGGCGTAGGTATGGGCAAGGTAGGTATGCC GCTGCGCGTGGCGGTTACCGGTGCCGGTCAGTCACCGGGTATGGATGTCACCGTTCATGCCATCGGTCAGAACCGTTCTC TGCAGCGTATCGACCTGGCGTTGGCTTATATTGCCGGGCGTGAAGCTTAA
Upstream 100 bases:
>100_bases AGGAATTAGCGCGTGGTGGTACAATGTTGCCCACTTTTTTAAATTCCGAGCAATCGTCGGCAACCGCCGACACGCGTTGC GTAATAAGGCAGTGAAACCA
Downstream 100 bases:
>100_bases GGCTGAGCGTTTCCCTGCCAGTTAATGACAAAGCCCCGTGGAGCAATCCCGGGGCTTTTTTGTATCTGCTATTTGATGGC GAATTTCTGGTGCGCCGCGG
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS
Number of amino acids: Translated: 469; Mature: 469
Protein sequence:
>469_residues MKIKTRFAPSPTGYLHVGGARTALYSWLFSRHAGGEFVLRIEDTDLERSTQDAIDAIMDGMNWLNLDWNEGPYFQTKRFD RYNAVIDDMLVQDTAYKCYCSKERLEALREKQMENGEKPRYDGHCRDSQCSHTDDEPHVVRFRNPQEGSVIFDDKIRGPI EFSNQELDDLIIRRTDGSPTYNFCVVVDDWDMEISHVIRGEDHINNTPRQINILKALGAPVPEYAHVSMILGDDGKKLSK RHGAVGVMQYRDDGYLPQALLNYLVRLGWSHGDQEIFSIDEMKEFFTLEAINKSASAFNTEKLQWLNHHYINHMPAEEVA VHLAWHVEQLGIETRNGPELKDIVKLLGERCKTLKEMAESCRYFYEDFSEFDADAAKKHLRPVARQPLEAVRAKLAAITA WTPENVHDAIQGTADELGVGMGKVGMPLRVAVTGAGQSPGMDVTVHAIGQNRSLQRIDLALAYIAGREA
Sequences:
>Translated_469_residues MKIKTRFAPSPTGYLHVGGARTALYSWLFSRHAGGEFVLRIEDTDLERSTQDAIDAIMDGMNWLNLDWNEGPYFQTKRFD RYNAVIDDMLVQDTAYKCYCSKERLEALREKQMENGEKPRYDGHCRDSQCSHTDDEPHVVRFRNPQEGSVIFDDKIRGPI EFSNQELDDLIIRRTDGSPTYNFCVVVDDWDMEISHVIRGEDHINNTPRQINILKALGAPVPEYAHVSMILGDDGKKLSK RHGAVGVMQYRDDGYLPQALLNYLVRLGWSHGDQEIFSIDEMKEFFTLEAINKSASAFNTEKLQWLNHHYINHMPAEEVA VHLAWHVEQLGIETRNGPELKDIVKLLGERCKTLKEMAESCRYFYEDFSEFDADAAKKHLRPVARQPLEAVRAKLAAITA WTPENVHDAIQGTADELGVGMGKVGMPLRVAVTGAGQSPGMDVTVHAIGQNRSLQRIDLALAYIAGREA >Mature_469_residues MKIKTRFAPSPTGYLHVGGARTALYSWLFSRHAGGEFVLRIEDTDLERSTQDAIDAIMDGMNWLNLDWNEGPYFQTKRFD RYNAVIDDMLVQDTAYKCYCSKERLEALREKQMENGEKPRYDGHCRDSQCSHTDDEPHVVRFRNPQEGSVIFDDKIRGPI EFSNQELDDLIIRRTDGSPTYNFCVVVDDWDMEISHVIRGEDHINNTPRQINILKALGAPVPEYAHVSMILGDDGKKLSK RHGAVGVMQYRDDGYLPQALLNYLVRLGWSHGDQEIFSIDEMKEFFTLEAINKSASAFNTEKLQWLNHHYINHMPAEEVA VHLAWHVEQLGIETRNGPELKDIVKLLGERCKTLKEMAESCRYFYEDFSEFDADAAKKHLRPVARQPLEAVRAKLAAITA WTPENVHDAIQGTADELGVGMGKVGMPLRVAVTGAGQSPGMDVTVHAIGQNRSLQRIDLALAYIAGREA
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family
Homologues:
Organism=Homo sapiens, GI134288884, Length=493, Percent_Identity=30.6288032454361, Blast_Score=213, Evalue=4e-55, Organism=Escherichia coli, GI1788743, Length=468, Percent_Identity=83.5470085470085, Blast_Score=825, Evalue=0.0, Organism=Escherichia coli, GI226510925, Length=241, Percent_Identity=35.2697095435685, Blast_Score=136, Evalue=3e-33, Organism=Caenorhabditis elegans, GI71993394, Length=474, Percent_Identity=30.8016877637131, Blast_Score=216, Evalue=3e-56, Organism=Saccharomyces cerevisiae, GI6324540, Length=493, Percent_Identity=30.0202839756592, Blast_Score=236, Evalue=6e-63, Organism=Saccharomyces cerevisiae, GI6321192, Length=230, Percent_Identity=24.7826086956522, Blast_Score=75, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6324742, Length=213, Percent_Identity=23.4741784037559, Blast_Score=67, Evalue=8e-12, Organism=Drosophila melanogaster, GI24665321, Length=490, Percent_Identity=30.6122448979592, Blast_Score=248, Evalue=8e-66,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYE_SERP5 (A8GHC5)
Other databases:
- EMBL: CP000826 - RefSeq: YP_001479643.1 - ProteinModelPortal: A8GHC5 - SMR: A8GHC5 - STRING: A8GHC5 - GeneID: 5603084 - GenomeReviews: CP000826_GR - KEGG: spe:Spro_3417 - eggNOG: COG0008 - HOGENOM: HBG628189 - OMA: MAHIPLI - ProtClustDB: PRK01406 - BioCyc: SPRO399741:SPRO_3417-MONOMER - GO: GO:0005737 - HAMAP: MF_00022_B - InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 - Gene3D: G3DSA:1.10.1160.10 - Gene3D: G3DSA:3.40.50.620 - Gene3D: G3DSA:1.10.10.350 - PANTHER: PTHR10119 - PRINTS: PR00987 - TIGRFAMs: TIGR00464
Pfam domain/function: PF00749 tRNA-synt_1c; SSF48163 tRNA-synt_bind
EC number: =6.1.1.17
Molecular weight: Translated: 53181; Mature: 53181
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: BINDING 240-240
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKTRFAPSPTGYLHVGGARTALYSWLFSRHAGGEFVLRIEDTDLERSTQDAIDAIMDG CCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCC MNWLNLDWNEGPYFQTKRFDRYNAVIDDMLVQDTAYKCYCSKERLEALREKQMENGEKPR CCEEECCCCCCCCCCCHHCHHHHHHHHHHHHHCCHHHEEECHHHHHHHHHHHHHCCCCCC YDGHCRDSQCSHTDDEPHVVRFRNPQEGSVIFDDKIRGPIEFSNQELDDLIIRRTDGSPT CCCCCCCCCCCCCCCCCCEEEECCCCCCCEEECCCCCCCCCCCCCCCCHHEEEECCCCCC YNFCVVVDDWDMEISHVIRGEDHINNTPRQINILKALGAPVPEYAHVSMILGDDGKKLSK EEEEEEEECCCCHHHHHHCCCHHCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHH RHGAVGVMQYRDDGYLPQALLNYLVRLGWSHGDQEIFSIDEMKEFFTLEAINKSASAFNT HCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCH EKLQWLNHHYINHMPAEEVAVHLAWHVEQLGIETRNGPELKDIVKLLGERCKTLKEMAES HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH CRYFYEDFSEFDADAAKKHLRPVARQPLEAVRAKLAAITAWTPENVHDAIQGTADELGVG HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHCCCHHHHCCC MGKVGMPLRVAVTGAGQSPGMDVTVHAIGQNRSLQRIDLALAYIAGREA CCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MKIKTRFAPSPTGYLHVGGARTALYSWLFSRHAGGEFVLRIEDTDLERSTQDAIDAIMDG CCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCC MNWLNLDWNEGPYFQTKRFDRYNAVIDDMLVQDTAYKCYCSKERLEALREKQMENGEKPR CCEEECCCCCCCCCCCHHCHHHHHHHHHHHHHCCHHHEEECHHHHHHHHHHHHHCCCCCC YDGHCRDSQCSHTDDEPHVVRFRNPQEGSVIFDDKIRGPIEFSNQELDDLIIRRTDGSPT CCCCCCCCCCCCCCCCCCEEEECCCCCCCEEECCCCCCCCCCCCCCCCHHEEEECCCCCC YNFCVVVDDWDMEISHVIRGEDHINNTPRQINILKALGAPVPEYAHVSMILGDDGKKLSK EEEEEEEECCCCHHHHHHCCCHHCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHH RHGAVGVMQYRDDGYLPQALLNYLVRLGWSHGDQEIFSIDEMKEFFTLEAINKSASAFNT HCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCH EKLQWLNHHYINHMPAEEVAVHLAWHVEQLGIETRNGPELKDIVKLLGERCKTLKEMAES HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH CRYFYEDFSEFDADAAKKHLRPVARQPLEAVRAKLAAITAWTPENVHDAIQGTADELGVG HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHCCCHHHHCCC MGKVGMPLRVAVTGAGQSPGMDVTVHAIGQNRSLQRIDLALAYIAGREA CCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA