Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
---|---|
Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is adh [H]
Identifier: 154244620
GI number: 154244620
Start: 752695
End: 753819
Strand: Reverse
Name: adh [H]
Synonym: Xaut_0669
Alternate gene names: 154244620
Gene position: 753819-752695 (Counterclockwise)
Preceding gene: 154244623
Following gene: 154244619
Centisome position: 14.2
GC content: 68.8
Gene sequence:
>1125_bases ATGACCGACACCATCGAACGCCCCGGCTTCGTCGAGCGCAACCGCCCCGGCAGGGCGAAGATGAAGGCGGCCATCTTCGT GGAGAAGAACCGCATCGTCCTGGACGAGAAGCCCATTCCGGACGTGGGTCCGCTCGACGCCCTCATCCGCATCACCACCA CCACCATCTGCGGCACGGATGTCCATATCCTGAAGGGCGAATATCCGGTCGAGAAGGGCCTCACCATCGGCCACGAGCCG GTGGGCATCATCGAGAAGCTGGGTTCGGCGGTGGAAGGGTTCGCCGAGGGCCAGCGCGTGATCGCCGGCGCCATCACCCC GTCCGGCTATTCCAACGCCTGCCTGTGCGGCTGCGCCTCGCAGGACGGCCCGCGCATGAAGCACGGCTTCAAGCCCATGG GCGGCTGGCGCTTCGGCAACACCATCGACGGCGCCCAGGCCGAGTATCTGGTGGTGCCCGACGCCATGACCAACCTTGCC CCGGTGCCCGAAGCCCTCGGCGACGAGCAGGTCCTCATGTGCCCGGACATCATGTCCACCGGCTTTGCCGGCGCCGAGAG CGGCAAGGTGCGCATCGGCGACACGGTGGCCGTGTTCGCGCAGGGGCCCATCGGCCTGTGCGCCACCGCCGGAGCCCGGC TCATGGGCGCCACCCGCATCATCGCCGTGGACCGGGTGGGCGAGCGCCTCAACGTCGCCCGCGCCATGGGGGCGGACGAG GTGGTGGACTTCTCCAAGGTGGACCCGGTGGAAGAGATCCTGCGCCTCACCGACGGGCGCGGCGTGGACGTGGCCATCGA GGCCCTCGGCCGGCAGGAGACCTTCGAGGCCGCCCTGCGCGTGCTGCGGCCCGGCGGCACCCTGTCCTCGCTGGGGGTCT ATTCCAGCGACCTGAAGATCCCGCTGGATGCCTTCGCGGCGGGCCTGGGCGACAACAAGATCGTCACCTCGCTCTGCCCC GGCGGCAAGGAGCGTATGCGCCGCCTGATGGATGTGGTGGCCTCGGGCCGGGTGGATGCCCGCGCCCTCGTCACCCACCG CTTCAAGCTGGACGACATCGAAAAGGCCTATGACCTGTTCTCGCACCAGCGCGACGGCGTTCTCAAGGTGGCCATCACGC CTTAA
Upstream 100 bases:
>100_bases CCCGCATCAATGCCGCGCCGGCCCCTTCGTCCTAACCAGTTACCGCGGCACCGAAGCGTCCCCACGTTTCCCCACCGGGG ACGGATCAGGAAGGAACGCC
Downstream 100 bases:
>100_bases TCTTTTGCCGCCCCGGCTCCGCGCCGGGGCGGCTTCCTCCAAGACTTGCTCCAAGAACTTTCTCCAAGAACTTTCTTCAA GACGGGACGATCCATGACGG
Product: alcohol dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 374; Mature: 373
Protein sequence:
>374_residues MTDTIERPGFVERNRPGRAKMKAAIFVEKNRIVLDEKPIPDVGPLDALIRITTTTICGTDVHILKGEYPVEKGLTIGHEP VGIIEKLGSAVEGFAEGQRVIAGAITPSGYSNACLCGCASQDGPRMKHGFKPMGGWRFGNTIDGAQAEYLVVPDAMTNLA PVPEALGDEQVLMCPDIMSTGFAGAESGKVRIGDTVAVFAQGPIGLCATAGARLMGATRIIAVDRVGERLNVARAMGADE VVDFSKVDPVEEILRLTDGRGVDVAIEALGRQETFEAALRVLRPGGTLSSLGVYSSDLKIPLDAFAAGLGDNKIVTSLCP GGKERMRRLMDVVASGRVDARALVTHRFKLDDIEKAYDLFSHQRDGVLKVAITP
Sequences:
>Translated_374_residues MTDTIERPGFVERNRPGRAKMKAAIFVEKNRIVLDEKPIPDVGPLDALIRITTTTICGTDVHILKGEYPVEKGLTIGHEP VGIIEKLGSAVEGFAEGQRVIAGAITPSGYSNACLCGCASQDGPRMKHGFKPMGGWRFGNTIDGAQAEYLVVPDAMTNLA PVPEALGDEQVLMCPDIMSTGFAGAESGKVRIGDTVAVFAQGPIGLCATAGARLMGATRIIAVDRVGERLNVARAMGADE VVDFSKVDPVEEILRLTDGRGVDVAIEALGRQETFEAALRVLRPGGTLSSLGVYSSDLKIPLDAFAAGLGDNKIVTSLCP GGKERMRRLMDVVASGRVDARALVTHRFKLDDIEKAYDLFSHQRDGVLKVAITP >Mature_373_residues TDTIERPGFVERNRPGRAKMKAAIFVEKNRIVLDEKPIPDVGPLDALIRITTTTICGTDVHILKGEYPVEKGLTIGHEPV GIIEKLGSAVEGFAEGQRVIAGAITPSGYSNACLCGCASQDGPRMKHGFKPMGGWRFGNTIDGAQAEYLVVPDAMTNLAP VPEALGDEQVLMCPDIMSTGFAGAESGKVRIGDTVAVFAQGPIGLCATAGARLMGATRIIAVDRVGERLNVARAMGADEV VDFSKVDPVEEILRLTDGRGVDVAIEALGRQETFEAALRVLRPGGTLSSLGVYSSDLKIPLDAFAAGLGDNKIVTSLCPG GKERMRRLMDVVASGRVDARALVTHRFKLDDIEKAYDLFSHQRDGVLKVAITP
Specific function: Unknown
COG id: COG1063
COG function: function code ER; Threonine dehydrogenase and related Zn-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI156627571, Length=342, Percent_Identity=30.7017543859649, Blast_Score=129, Evalue=4e-30, Organism=Homo sapiens, GI4501929, Length=366, Percent_Identity=30.327868852459, Blast_Score=105, Evalue=8e-23, Organism=Homo sapiens, GI71565152, Length=376, Percent_Identity=28.7234042553192, Blast_Score=102, Evalue=5e-22, Organism=Homo sapiens, GI71743840, Length=375, Percent_Identity=27.4666666666667, Blast_Score=101, Evalue=1e-21, Organism=Homo sapiens, GI156523966, Length=335, Percent_Identity=28.6567164179104, Blast_Score=101, Evalue=1e-21, Organism=Homo sapiens, GI4501939, Length=335, Percent_Identity=28.6567164179104, Blast_Score=101, Evalue=1e-21, Organism=Homo sapiens, GI262073058, Length=366, Percent_Identity=27.5956284153005, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI71565154, Length=371, Percent_Identity=29.3800539083558, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI34577061, Length=370, Percent_Identity=28.1081081081081, Blast_Score=99, Evalue=6e-21, Organism=Homo sapiens, GI4501933, Length=370, Percent_Identity=28.1081081081081, Blast_Score=94, Evalue=2e-19, Organism=Escherichia coli, GI1786825, Length=392, Percent_Identity=28.8265306122449, Blast_Score=138, Evalue=7e-34, Organism=Escherichia coli, GI1790045, Length=345, Percent_Identity=29.2753623188406, Blast_Score=121, Evalue=8e-29, Organism=Escherichia coli, GI1787863, Length=356, Percent_Identity=26.123595505618, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI87082125, Length=368, Percent_Identity=27.445652173913, Blast_Score=108, Evalue=6e-25, Organism=Escherichia coli, GI1788073, Length=357, Percent_Identity=26.3305322128852, Blast_Score=101, Evalue=1e-22, Organism=Escherichia coli, GI1788075, Length=336, Percent_Identity=27.3809523809524, Blast_Score=99, Evalue=4e-22, Organism=Escherichia coli, GI1786552, Length=339, Percent_Identity=28.3185840707965, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI1788407, Length=334, Percent_Identity=25.1497005988024, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI226510992, Length=343, Percent_Identity=26.8221574344023, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1790718, Length=289, Percent_Identity=22.8373702422145, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI87081918, Length=287, Percent_Identity=24.7386759581882, Blast_Score=72, Evalue=7e-14, Organism=Caenorhabditis elegans, GI17562878, Length=363, Percent_Identity=28.099173553719, Blast_Score=108, Evalue=5e-24, Organism=Caenorhabditis elegans, GI25146526, Length=344, Percent_Identity=30.2325581395349, Blast_Score=103, Evalue=2e-22, Organism=Caenorhabditis elegans, GI71997431, Length=353, Percent_Identity=29.7450424929178, Blast_Score=102, Evalue=4e-22, Organism=Caenorhabditis elegans, GI17562876, Length=358, Percent_Identity=25.6983240223464, Blast_Score=101, Evalue=7e-22, Organism=Caenorhabditis elegans, GI17565904, Length=372, Percent_Identity=29.0322580645161, Blast_Score=99, Evalue=3e-21, Organism=Saccharomyces cerevisiae, GI6319955, Length=348, Percent_Identity=29.3103448275862, Blast_Score=128, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6322619, Length=348, Percent_Identity=28.735632183908, Blast_Score=127, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6323099, Length=366, Percent_Identity=26.5027322404372, Blast_Score=108, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6320033, Length=336, Percent_Identity=29.7619047619048, Blast_Score=95, Evalue=1e-20, Organism=Saccharomyces cerevisiae, GI6319520, Length=262, Percent_Identity=27.0992366412214, Blast_Score=85, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6319258, Length=388, Percent_Identity=25.5154639175258, Blast_Score=84, Evalue=5e-17, Organism=Saccharomyces cerevisiae, GI6319621, Length=335, Percent_Identity=25.0746268656716, Blast_Score=80, Evalue=6e-16, Organism=Saccharomyces cerevisiae, GI6323961, Length=329, Percent_Identity=26.1398176291793, Blast_Score=79, Evalue=8e-16, Organism=Saccharomyces cerevisiae, GI6323729, Length=352, Percent_Identity=24.7159090909091, Blast_Score=79, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6324486, Length=328, Percent_Identity=26.5243902439024, Blast_Score=76, Evalue=8e-15, Organism=Drosophila melanogaster, GI17137530, Length=361, Percent_Identity=27.9778393351801, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI17737897, Length=358, Percent_Identity=27.0949720670391, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI17737895, Length=362, Percent_Identity=28.4530386740331, Blast_Score=91, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR002328 - InterPro: IPR011032 - InterPro: IPR016040 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.1.1.1 [H]
Molecular weight: Translated: 39795; Mature: 39664
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: PS00059 ADH_ZINC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTIERPGFVERNRPGRAKMKAAIFVEKNRIVLDEKPIPDVGPLDALIRITTTTICGTD CCCCCCCCCCCCCCCCCCHHEEEEEEEECCEEEECCCCCCCCCCHHHHEEEEEEEECCCC VHILKGEYPVEKGLTIGHEPVGIIEKLGSAVEGFAEGQRVIAGAITPSGYSNACLCGCAS EEEEECCCCHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCEEEECCC QDGPRMKHGFKPMGGWRFGNTIDGAQAEYLVVPDAMTNLAPVPEALGDEQVLMCPDIMST CCCCCHHCCCCCCCCCCCCCCCCCCCCEEEECCHHHHCCCCCHHHCCCCCEEECCHHHHC GFAGAESGKVRIGDTVAVFAQGPIGLCATAGARLMGATRIIAVDRVGERLNVARAMGADE CCCCCCCCCEEECCEEEEEECCCCCHHHHCCHHHHCCEEEEEEHHHCHHHHHHHHCCCHH VVDFSKVDPVEEILRLTDGRGVDVAIEALGRQETFEAALRVLRPGGTLSSLGVYSSDLKI HCCCCCCCHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCHHHCCEECCCCCC PLDAFAAGLGDNKIVTSLCPGGKERMRRLMDVVASGRVDARALVTHRFKLDDIEKAYDLF CHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCEEHHHEECCHHHHHHHHHHH SHQRDGVLKVAITP HCCCCCEEEEEECC >Mature Secondary Structure TDTIERPGFVERNRPGRAKMKAAIFVEKNRIVLDEKPIPDVGPLDALIRITTTTICGTD CCCCCCCCCCCCCCCCCHHEEEEEEEECCEEEECCCCCCCCCCHHHHEEEEEEEECCCC VHILKGEYPVEKGLTIGHEPVGIIEKLGSAVEGFAEGQRVIAGAITPSGYSNACLCGCAS EEEEECCCCHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCEEEECCC QDGPRMKHGFKPMGGWRFGNTIDGAQAEYLVVPDAMTNLAPVPEALGDEQVLMCPDIMST CCCCCHHCCCCCCCCCCCCCCCCCCCCEEEECCHHHHCCCCCHHHCCCCCEEECCHHHHC GFAGAESGKVRIGDTVAVFAQGPIGLCATAGARLMGATRIIAVDRVGERLNVARAMGADE CCCCCCCCCEEECCEEEEEECCCCCHHHHCCHHHHCCEEEEEEHHHCHHHHHHHHCCCHH VVDFSKVDPVEEILRLTDGRGVDVAIEALGRQETFEAALRVLRPGGTLSSLGVYSSDLKI HCCCCCCCHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCHHHCCEECCCCCC PLDAFAAGLGDNKIVTSLCPGGKERMRRLMDVVASGRVDARALVTHRFKLDDIEKAYDLF CHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCEEHHHEECCHHHHHHHHHHH SHQRDGVLKVAITP HCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2846513 [H]