Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154244619
Identifier: 154244619
GI number: 154244619
Start: 750967
End: 752601
Strand: Reverse
Name: 154244619
Synonym: Xaut_0668
Alternate gene names: NA
Gene position: 752601-750967 (Counterclockwise)
Preceding gene: 154244620
Following gene: 154244614
Centisome position: 14.18
GC content: 69.17
Gene sequence:
>1635_bases ATGACGGCGCCGACGGCCACGCCCGCACCGCCCGCCGCCCCCGACCATGTGGTGGGCGACCAGAGTGCCGTCTTCGCCCT TCTGCAAGATCCCGCCACCCACGGCACCGCTGAAAAGGTGGAGCGCATAGACACCCACGGTGCTGCGGTCTTCCTCGCAG GCCCGTTCGCTTACAAGGTGAAGCGGGCGGTGTTCTTCCCCTTCATGGATTTCTCGACGCCGCAGAAGCGCCAAGCCGCC TGCGAGGCGGAAGTGGCCATCAGCGGCGCCGGGGCGCCGGGGCTTTATCTCGGCGTGGTGCCCATCGTGCGGACGGTGCA TGGCCTTACGCTCGGCGGGGACGGCGAGGCGGTGGAGCATGCGGTGAAGATGCGCCGCTTCGACACCGATCTCACCCTGG ACAAGGTGGCCGAGCGCGGCGCGCTTTCGCCCGATCTCGTGAAGGCGCTGGCGACCGCTGTTCTTGAAGCCCATGCCGCC GCGCCGGTGCGGCGCGGATTCGACACCGCCTCCCGGCTCACCTCCTATCTCGCCGACAACAAAACGGAATTTTCAGCCCG GCCCGAGCTTTTCCCGCCCAATGAGGTCGCCCGGCTGGCGCAGCTTTCGGAAGACGCCCTGGCGGGCATCACGCCGCTTC TGAACGCCCGCAGCACCGCCGGCTTCGTGCGCCGCTGCCACGGCGACATGCATCTGCGCAACATCGTGCTCTTGGACGGC AAGCCGGTGCTGTTCGACGCCATCGAGTTCAACGACGACATCGCCACCTGCGACGTGCTCTACGACCTCGCCTTCCTCAT CATGGACCTGTGGCAGCGGGGGCTTCGCGACGCGGCCAACGCCATCCTCAATCGCTATCTGTGGGCGAGCGCGGACGACG GGATCGAAGGGCTTGAAGCCCTGCCGACCTTCCTCAGCCTGCGGGCCGCCATTCGCGCCAAGGTGGAAGCCGCCGGGCTC GCGCATCTTGGCGCAGAGCGGAAGGCGGAGGGCGAGACGCGGATACGCGCCGCCTTCGCGCAGGCCGTCGCCTTTCTTGA ACCCAACCCCGCCGATACGTGCCCACCACCGCTCCTGAACGGCGCGACCATGGCCGAGACGGGACCCGGCCGCCCCTCCC TATGGGCTGTTGGAGGCCTCTCCGGCAGCGGCAAGAGCACGTGGGCTGCGAAAATGGCGCCAGCGCTCGGCCACGCGCCC GGCGCGGTGATCCTGCGCAGCGACATCGAGCGCAAGCGCCTTGCCGGCGTGGCGGAGACGCAGAAGCTGCCGCCGGAGGC CTACACCCCCGAGGCGACCCGGCAGGTCTACGACCGGCTGCGCGCTCTGGCGGCCCGGGTGCTCGCCACCGGCCACAGCG TGATCGTCGATGCCGTCCATGCCCGGCCGGACGAGCGCGACGCCATCGCTCAGGTGGCGCGCGAAGCCGGGGCGGATTTT CAGGGCTGGTGGCTGGAAGCTCCGAAAGGCGAGCTGATCCGCCGTGTGGAAGCGCGCACCGGCGATGCCTCCGATGCCGA CGCGGCAGTGGTGCGCCGGCAGCTCTCTTATAATCTGGGCGACATCAGCTGGACCCGCGCTCAGGCCTTCAGCACGGCGC TTTCGACGGCTCAACCTTCGGATCCACGCCCGTGA
Upstream 100 bases:
>100_bases GCCTTAATCTTTTGCCGCCCCGGCTCCGCGCCGGGGCGGCTTCCTCCAAGACTTGCTCCAAGAACTTTCTCCAAGAACTT TCTTCAAGACGGGACGATCC
Downstream 100 bases:
>100_bases CCACCTCCGGCTGACGGTCGGGGGAAGCGGGCGTCGAGGCCTGCGGCGTGGTGCCGATGAACGAGCCGCCGGTGCCGCCG GTCCAGCCGGTGGAACCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 544; Mature: 543
Protein sequence:
>544_residues MTAPTATPAPPAAPDHVVGDQSAVFALLQDPATHGTAEKVERIDTHGAAVFLAGPFAYKVKRAVFFPFMDFSTPQKRQAA CEAEVAISGAGAPGLYLGVVPIVRTVHGLTLGGDGEAVEHAVKMRRFDTDLTLDKVAERGALSPDLVKALATAVLEAHAA APVRRGFDTASRLTSYLADNKTEFSARPELFPPNEVARLAQLSEDALAGITPLLNARSTAGFVRRCHGDMHLRNIVLLDG KPVLFDAIEFNDDIATCDVLYDLAFLIMDLWQRGLRDAANAILNRYLWASADDGIEGLEALPTFLSLRAAIRAKVEAAGL AHLGAERKAEGETRIRAAFAQAVAFLEPNPADTCPPPLLNGATMAETGPGRPSLWAVGGLSGSGKSTWAAKMAPALGHAP GAVILRSDIERKRLAGVAETQKLPPEAYTPEATRQVYDRLRALAARVLATGHSVIVDAVHARPDERDAIAQVAREAGADF QGWWLEAPKGELIRRVEARTGDASDADAAVVRRQLSYNLGDISWTRAQAFSTALSTAQPSDPRP
Sequences:
>Translated_544_residues MTAPTATPAPPAAPDHVVGDQSAVFALLQDPATHGTAEKVERIDTHGAAVFLAGPFAYKVKRAVFFPFMDFSTPQKRQAA CEAEVAISGAGAPGLYLGVVPIVRTVHGLTLGGDGEAVEHAVKMRRFDTDLTLDKVAERGALSPDLVKALATAVLEAHAA APVRRGFDTASRLTSYLADNKTEFSARPELFPPNEVARLAQLSEDALAGITPLLNARSTAGFVRRCHGDMHLRNIVLLDG KPVLFDAIEFNDDIATCDVLYDLAFLIMDLWQRGLRDAANAILNRYLWASADDGIEGLEALPTFLSLRAAIRAKVEAAGL AHLGAERKAEGETRIRAAFAQAVAFLEPNPADTCPPPLLNGATMAETGPGRPSLWAVGGLSGSGKSTWAAKMAPALGHAP GAVILRSDIERKRLAGVAETQKLPPEAYTPEATRQVYDRLRALAARVLATGHSVIVDAVHARPDERDAIAQVAREAGADF QGWWLEAPKGELIRRVEARTGDASDADAAVVRRQLSYNLGDISWTRAQAFSTALSTAQPSDPRP >Mature_543_residues TAPTATPAPPAAPDHVVGDQSAVFALLQDPATHGTAEKVERIDTHGAAVFLAGPFAYKVKRAVFFPFMDFSTPQKRQAAC EAEVAISGAGAPGLYLGVVPIVRTVHGLTLGGDGEAVEHAVKMRRFDTDLTLDKVAERGALSPDLVKALATAVLEAHAAA PVRRGFDTASRLTSYLADNKTEFSARPELFPPNEVARLAQLSEDALAGITPLLNARSTAGFVRRCHGDMHLRNIVLLDGK PVLFDAIEFNDDIATCDVLYDLAFLIMDLWQRGLRDAANAILNRYLWASADDGIEGLEALPTFLSLRAAIRAKVEAAGLA HLGAERKAEGETRIRAAFAQAVAFLEPNPADTCPPPLLNGATMAETGPGRPSLWAVGGLSGSGKSTWAAKMAPALGHAPG AVILRSDIERKRLAGVAETQKLPPEAYTPEATRQVYDRLRALAARVLATGHSVIVDAVHARPDERDAIAQVAREAGADFQ GWWLEAPKGELIRRVEARTGDASDADAAVVRRQLSYNLGDISWTRAQAFSTALSTAQPSDPRP
Specific function: Some isolated peptides of this protein are able to bind to human U937 monocytoblastic and A549 epithelial cell lines [H]
COG id: COG2187
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Secreted, cell wall [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011009 - InterPro: IPR010488 [H]
Pfam domain/function: PF06414 Zeta_toxin [H]
EC number: NA
Molecular weight: Translated: 57949; Mature: 57818
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPTATPAPPAAPDHVVGDQSAVFALLQDPATHGTAEKVERIDTHGAAVFLAGPFAYKV CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCHHHHH KRAVFFPFMDFSTPQKRQAACEAEVAISGAGAPGLYLGVVPIVRTVHGLTLGGDGEAVEH HHHHHEECCCCCCCHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHCCEECCCCHHHHH AVKMRRFDTDLTLDKVAERGALSPDLVKALATAVLEAHAAAPVRRGFDTASRLTSYLADN HHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC KTEFSARPELFPPNEVARLAQLSEDALAGITPLLNARSTAGFVRRCHGDMHLRNIVLLDG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEEEECC KPVLFDAIEFNDDIATCDVLYDLAFLIMDLWQRGLRDAANAILNRYLWASADDGIEGLEA CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH LPTFLSLRAAIRAKVEAAGLAHLGAERKAEGETRIRAAFAQAVAFLEPNPADTCPPPLLN HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC GATMAETGPGRPSLWAVGGLSGSGKSTWAAKMAPALGHAPGAVILRSDIERKRLAGVAET CCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCHHHH QKLPPEAYTPEATRQVYDRLRALAARVLATGHSVIVDAVHARPDERDAIAQVAREAGADF HCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCC QGWWLEAPKGELIRRVEARTGDASDADAAVVRRQLSYNLGDISWTRAQAFSTALSTAQPS CCEEEECCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC DPRP CCCC >Mature Secondary Structure TAPTATPAPPAAPDHVVGDQSAVFALLQDPATHGTAEKVERIDTHGAAVFLAGPFAYKV CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCHHHHH KRAVFFPFMDFSTPQKRQAACEAEVAISGAGAPGLYLGVVPIVRTVHGLTLGGDGEAVEH HHHHHEECCCCCCCHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHCCEECCCCHHHHH AVKMRRFDTDLTLDKVAERGALSPDLVKALATAVLEAHAAAPVRRGFDTASRLTSYLADN HHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC KTEFSARPELFPPNEVARLAQLSEDALAGITPLLNARSTAGFVRRCHGDMHLRNIVLLDG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEEEECC KPVLFDAIEFNDDIATCDVLYDLAFLIMDLWQRGLRDAANAILNRYLWASADDGIEGLEA CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH LPTFLSLRAAIRAKVEAAGLAHLGAERKAEGETRIRAAFAQAVAFLEPNPADTCPPPLLN HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC GATMAETGPGRPSLWAVGGLSGSGKSTWAAKMAPALGHAPGAVILRSDIERKRLAGVAET CCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCHHHH QKLPPEAYTPEATRQVYDRLRALAARVLATGHSVIVDAVHARPDERDAIAQVAREAGADF HCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCC QGWWLEAPKGELIRRVEARTGDASDADAAVVRRQLSYNLGDISWTRAQAFSTALSTAQPS CCEEEECCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC DPRP CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]