Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

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The map label for this gene is 154244619

Identifier: 154244619

GI number: 154244619

Start: 750967

End: 752601

Strand: Reverse

Name: 154244619

Synonym: Xaut_0668

Alternate gene names: NA

Gene position: 752601-750967 (Counterclockwise)

Preceding gene: 154244620

Following gene: 154244614

Centisome position: 14.18

GC content: 69.17

Gene sequence:

>1635_bases
ATGACGGCGCCGACGGCCACGCCCGCACCGCCCGCCGCCCCCGACCATGTGGTGGGCGACCAGAGTGCCGTCTTCGCCCT
TCTGCAAGATCCCGCCACCCACGGCACCGCTGAAAAGGTGGAGCGCATAGACACCCACGGTGCTGCGGTCTTCCTCGCAG
GCCCGTTCGCTTACAAGGTGAAGCGGGCGGTGTTCTTCCCCTTCATGGATTTCTCGACGCCGCAGAAGCGCCAAGCCGCC
TGCGAGGCGGAAGTGGCCATCAGCGGCGCCGGGGCGCCGGGGCTTTATCTCGGCGTGGTGCCCATCGTGCGGACGGTGCA
TGGCCTTACGCTCGGCGGGGACGGCGAGGCGGTGGAGCATGCGGTGAAGATGCGCCGCTTCGACACCGATCTCACCCTGG
ACAAGGTGGCCGAGCGCGGCGCGCTTTCGCCCGATCTCGTGAAGGCGCTGGCGACCGCTGTTCTTGAAGCCCATGCCGCC
GCGCCGGTGCGGCGCGGATTCGACACCGCCTCCCGGCTCACCTCCTATCTCGCCGACAACAAAACGGAATTTTCAGCCCG
GCCCGAGCTTTTCCCGCCCAATGAGGTCGCCCGGCTGGCGCAGCTTTCGGAAGACGCCCTGGCGGGCATCACGCCGCTTC
TGAACGCCCGCAGCACCGCCGGCTTCGTGCGCCGCTGCCACGGCGACATGCATCTGCGCAACATCGTGCTCTTGGACGGC
AAGCCGGTGCTGTTCGACGCCATCGAGTTCAACGACGACATCGCCACCTGCGACGTGCTCTACGACCTCGCCTTCCTCAT
CATGGACCTGTGGCAGCGGGGGCTTCGCGACGCGGCCAACGCCATCCTCAATCGCTATCTGTGGGCGAGCGCGGACGACG
GGATCGAAGGGCTTGAAGCCCTGCCGACCTTCCTCAGCCTGCGGGCCGCCATTCGCGCCAAGGTGGAAGCCGCCGGGCTC
GCGCATCTTGGCGCAGAGCGGAAGGCGGAGGGCGAGACGCGGATACGCGCCGCCTTCGCGCAGGCCGTCGCCTTTCTTGA
ACCCAACCCCGCCGATACGTGCCCACCACCGCTCCTGAACGGCGCGACCATGGCCGAGACGGGACCCGGCCGCCCCTCCC
TATGGGCTGTTGGAGGCCTCTCCGGCAGCGGCAAGAGCACGTGGGCTGCGAAAATGGCGCCAGCGCTCGGCCACGCGCCC
GGCGCGGTGATCCTGCGCAGCGACATCGAGCGCAAGCGCCTTGCCGGCGTGGCGGAGACGCAGAAGCTGCCGCCGGAGGC
CTACACCCCCGAGGCGACCCGGCAGGTCTACGACCGGCTGCGCGCTCTGGCGGCCCGGGTGCTCGCCACCGGCCACAGCG
TGATCGTCGATGCCGTCCATGCCCGGCCGGACGAGCGCGACGCCATCGCTCAGGTGGCGCGCGAAGCCGGGGCGGATTTT
CAGGGCTGGTGGCTGGAAGCTCCGAAAGGCGAGCTGATCCGCCGTGTGGAAGCGCGCACCGGCGATGCCTCCGATGCCGA
CGCGGCAGTGGTGCGCCGGCAGCTCTCTTATAATCTGGGCGACATCAGCTGGACCCGCGCTCAGGCCTTCAGCACGGCGC
TTTCGACGGCTCAACCTTCGGATCCACGCCCGTGA

Upstream 100 bases:

>100_bases
GCCTTAATCTTTTGCCGCCCCGGCTCCGCGCCGGGGCGGCTTCCTCCAAGACTTGCTCCAAGAACTTTCTCCAAGAACTT
TCTTCAAGACGGGACGATCC

Downstream 100 bases:

>100_bases
CCACCTCCGGCTGACGGTCGGGGGAAGCGGGCGTCGAGGCCTGCGGCGTGGTGCCGATGAACGAGCCGCCGGTGCCGCCG
GTCCAGCCGGTGGAACCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 544; Mature: 543

Protein sequence:

>544_residues
MTAPTATPAPPAAPDHVVGDQSAVFALLQDPATHGTAEKVERIDTHGAAVFLAGPFAYKVKRAVFFPFMDFSTPQKRQAA
CEAEVAISGAGAPGLYLGVVPIVRTVHGLTLGGDGEAVEHAVKMRRFDTDLTLDKVAERGALSPDLVKALATAVLEAHAA
APVRRGFDTASRLTSYLADNKTEFSARPELFPPNEVARLAQLSEDALAGITPLLNARSTAGFVRRCHGDMHLRNIVLLDG
KPVLFDAIEFNDDIATCDVLYDLAFLIMDLWQRGLRDAANAILNRYLWASADDGIEGLEALPTFLSLRAAIRAKVEAAGL
AHLGAERKAEGETRIRAAFAQAVAFLEPNPADTCPPPLLNGATMAETGPGRPSLWAVGGLSGSGKSTWAAKMAPALGHAP
GAVILRSDIERKRLAGVAETQKLPPEAYTPEATRQVYDRLRALAARVLATGHSVIVDAVHARPDERDAIAQVAREAGADF
QGWWLEAPKGELIRRVEARTGDASDADAAVVRRQLSYNLGDISWTRAQAFSTALSTAQPSDPRP

Sequences:

>Translated_544_residues
MTAPTATPAPPAAPDHVVGDQSAVFALLQDPATHGTAEKVERIDTHGAAVFLAGPFAYKVKRAVFFPFMDFSTPQKRQAA
CEAEVAISGAGAPGLYLGVVPIVRTVHGLTLGGDGEAVEHAVKMRRFDTDLTLDKVAERGALSPDLVKALATAVLEAHAA
APVRRGFDTASRLTSYLADNKTEFSARPELFPPNEVARLAQLSEDALAGITPLLNARSTAGFVRRCHGDMHLRNIVLLDG
KPVLFDAIEFNDDIATCDVLYDLAFLIMDLWQRGLRDAANAILNRYLWASADDGIEGLEALPTFLSLRAAIRAKVEAAGL
AHLGAERKAEGETRIRAAFAQAVAFLEPNPADTCPPPLLNGATMAETGPGRPSLWAVGGLSGSGKSTWAAKMAPALGHAP
GAVILRSDIERKRLAGVAETQKLPPEAYTPEATRQVYDRLRALAARVLATGHSVIVDAVHARPDERDAIAQVAREAGADF
QGWWLEAPKGELIRRVEARTGDASDADAAVVRRQLSYNLGDISWTRAQAFSTALSTAQPSDPRP
>Mature_543_residues
TAPTATPAPPAAPDHVVGDQSAVFALLQDPATHGTAEKVERIDTHGAAVFLAGPFAYKVKRAVFFPFMDFSTPQKRQAAC
EAEVAISGAGAPGLYLGVVPIVRTVHGLTLGGDGEAVEHAVKMRRFDTDLTLDKVAERGALSPDLVKALATAVLEAHAAA
PVRRGFDTASRLTSYLADNKTEFSARPELFPPNEVARLAQLSEDALAGITPLLNARSTAGFVRRCHGDMHLRNIVLLDGK
PVLFDAIEFNDDIATCDVLYDLAFLIMDLWQRGLRDAANAILNRYLWASADDGIEGLEALPTFLSLRAAIRAKVEAAGLA
HLGAERKAEGETRIRAAFAQAVAFLEPNPADTCPPPLLNGATMAETGPGRPSLWAVGGLSGSGKSTWAAKMAPALGHAPG
AVILRSDIERKRLAGVAETQKLPPEAYTPEATRQVYDRLRALAARVLATGHSVIVDAVHARPDERDAIAQVAREAGADFQ
GWWLEAPKGELIRRVEARTGDASDADAAVVRRQLSYNLGDISWTRAQAFSTALSTAQPSDPRP

Specific function: Some isolated peptides of this protein are able to bind to human U937 monocytoblastic and A549 epithelial cell lines [H]

COG id: COG2187

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Secreted, cell wall [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011009
- InterPro:   IPR010488 [H]

Pfam domain/function: PF06414 Zeta_toxin [H]

EC number: NA

Molecular weight: Translated: 57949; Mature: 57818

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPTATPAPPAAPDHVVGDQSAVFALLQDPATHGTAEKVERIDTHGAAVFLAGPFAYKV
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCHHHHH
KRAVFFPFMDFSTPQKRQAACEAEVAISGAGAPGLYLGVVPIVRTVHGLTLGGDGEAVEH
HHHHHEECCCCCCCHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHCCEECCCCHHHHH
AVKMRRFDTDLTLDKVAERGALSPDLVKALATAVLEAHAAAPVRRGFDTASRLTSYLADN
HHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
KTEFSARPELFPPNEVARLAQLSEDALAGITPLLNARSTAGFVRRCHGDMHLRNIVLLDG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEEEECC
KPVLFDAIEFNDDIATCDVLYDLAFLIMDLWQRGLRDAANAILNRYLWASADDGIEGLEA
CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
LPTFLSLRAAIRAKVEAAGLAHLGAERKAEGETRIRAAFAQAVAFLEPNPADTCPPPLLN
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
GATMAETGPGRPSLWAVGGLSGSGKSTWAAKMAPALGHAPGAVILRSDIERKRLAGVAET
CCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCHHHH
QKLPPEAYTPEATRQVYDRLRALAARVLATGHSVIVDAVHARPDERDAIAQVAREAGADF
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCC
QGWWLEAPKGELIRRVEARTGDASDADAAVVRRQLSYNLGDISWTRAQAFSTALSTAQPS
CCEEEECCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC
DPRP
CCCC
>Mature Secondary Structure 
TAPTATPAPPAAPDHVVGDQSAVFALLQDPATHGTAEKVERIDTHGAAVFLAGPFAYKV
CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCHHHHH
KRAVFFPFMDFSTPQKRQAACEAEVAISGAGAPGLYLGVVPIVRTVHGLTLGGDGEAVEH
HHHHHEECCCCCCCHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHCCEECCCCHHHHH
AVKMRRFDTDLTLDKVAERGALSPDLVKALATAVLEAHAAAPVRRGFDTASRLTSYLADN
HHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
KTEFSARPELFPPNEVARLAQLSEDALAGITPLLNARSTAGFVRRCHGDMHLRNIVLLDG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEEEECC
KPVLFDAIEFNDDIATCDVLYDLAFLIMDLWQRGLRDAANAILNRYLWASADDGIEGLEA
CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
LPTFLSLRAAIRAKVEAAGLAHLGAERKAEGETRIRAAFAQAVAFLEPNPADTCPPPLLN
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
GATMAETGPGRPSLWAVGGLSGSGKSTWAAKMAPALGHAPGAVILRSDIERKRLAGVAET
CCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCHHHH
QKLPPEAYTPEATRQVYDRLRALAARVLATGHSVIVDAVHARPDERDAIAQVAREAGADF
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCC
QGWWLEAPKGELIRRVEARTGDASDADAAVVRRQLSYNLGDISWTRAQAFSTALSTAQPS
CCEEEECCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC
DPRP
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]