Definition Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence.
Accession NC_009507
Length 310,228

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The map label for this gene is 148550682

Identifier: 148550682

GI number: 148550682

Start: 133975

End: 134934

Strand: Reverse

Name: 148550682

Synonym: Swit_5245

Alternate gene names: NA

Gene position: 134934-133975 (Counterclockwise)

Preceding gene: 148550683

Following gene: 148550681

Centisome position: 43.5

GC content: 68.02

Gene sequence:

>960_bases
ATGCGTAAATGGATGCTCGTATCTGCCGCACTATGTCTGGCCGCCGCGCCTGCACTCGCCCAGGATCAGGCGGGTGCCCC
GCAGGTCCGGCTTTCGAAGCCGAACAGCTATGGCCTCAAGGACAACAAGATCGCCGTCCTCTCCTATGCGATCAATTTCG
TGACCGGGCAGCGCGCCTCGGCCAATGCCAGCGTCGGCACCAAGGCCCGGGCGGGCGCCACGCTGGTCGGCGTCGATGAA
GCGACGATGCGCCGCCTCGCCAACGAGGCCCATGCCGATCTCAAGGCGCAGCTGACCGCCGCGGGCATTCCCATCGTCGA
TGATGCCACCATAGCGGAGGTGACCCGGACCGCCGGCGTCACGCTGCTGCCGGGCAATCGCGACGCGAACCGCGACGGCG
GCATGGTCATCGGATCGGGCGTCAAGAAGTCCTATGTCAGCGTCGGCGCCGACGCGGCGCCGCTCACCGATCTCTACCAG
AGCGCGGGCAAGGTCGGCGGCTTCGGCATGCTCGCGACCCTGGGCAAGGGCAACAAGCTGAGCAAGCCGGCCCTGAGCCT
GGGCGCGGCCTTCGTATCGCCCTCGCTTACGATCGATTTCGCCGACGCCGATGCGCGCACGAGCCGCACGCTCGCCGGTT
CGCGCCGCGCCAGTGTCGATATCGACACCCAGTTCGCGATCCGCATGCCCTCGCCGGTCAACATCCAGGTCGGCCAGGCG
GTGGGCATCGCCGGCCCGATCGCCATGACCCTCTCGCGCGACGTCGTCATGGATGGGGCCTTCACCGGGTCGGCAGGCGC
CTCCTCCATGTCGACGGCGGGAGACTATGGCGAATGGAACCCGAACGATGCGGCCAATGTGGTCGTGGATCTGCCGCGCT
GGACGGCCATGGTGCAGAGCGCGTACCGCGCCTACAATGCCGCGATCGTCGCCAATCTACTCGCCGCGCGGGGCCGCTAG

Upstream 100 bases:

>100_bases
CTGAATCGATCAGTTCTGCAAAGGATCGCCCTGTTCCCGGCTTGACGGGCGGCGCTTTTCTTAGAAATTCTCTCCTGTCT
TTAACAGGAGGGGACGCTTC

Downstream 100 bases:

>100_bases
GCCGCGCTAGCCGCGACACGGACTCGCACGCCGGATCGGTGCGCGAGGTTGTCGCTGGCCGGCCACGCGGTCATCCCCGC
CGGGGTCACCTGCGCGCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MRKWMLVSAALCLAAAPALAQDQAGAPQVRLSKPNSYGLKDNKIAVLSYAINFVTGQRASANASVGTKARAGATLVGVDE
ATMRRLANEAHADLKAQLTAAGIPIVDDATIAEVTRTAGVTLLPGNRDANRDGGMVIGSGVKKSYVSVGADAAPLTDLYQ
SAGKVGGFGMLATLGKGNKLSKPALSLGAAFVSPSLTIDFADADARTSRTLAGSRRASVDIDTQFAIRMPSPVNIQVGQA
VGIAGPIAMTLSRDVVMDGAFTGSAGASSMSTAGDYGEWNPNDAANVVVDLPRWTAMVQSAYRAYNAAIVANLLAARGR

Sequences:

>Translated_319_residues
MRKWMLVSAALCLAAAPALAQDQAGAPQVRLSKPNSYGLKDNKIAVLSYAINFVTGQRASANASVGTKARAGATLVGVDE
ATMRRLANEAHADLKAQLTAAGIPIVDDATIAEVTRTAGVTLLPGNRDANRDGGMVIGSGVKKSYVSVGADAAPLTDLYQ
SAGKVGGFGMLATLGKGNKLSKPALSLGAAFVSPSLTIDFADADARTSRTLAGSRRASVDIDTQFAIRMPSPVNIQVGQA
VGIAGPIAMTLSRDVVMDGAFTGSAGASSMSTAGDYGEWNPNDAANVVVDLPRWTAMVQSAYRAYNAAIVANLLAARGR
>Mature_319_residues
MRKWMLVSAALCLAAAPALAQDQAGAPQVRLSKPNSYGLKDNKIAVLSYAINFVTGQRASANASVGTKARAGATLVGVDE
ATMRRLANEAHADLKAQLTAAGIPIVDDATIAEVTRTAGVTLLPGNRDANRDGGMVIGSGVKKSYVSVGADAAPLTDLYQ
SAGKVGGFGMLATLGKGNKLSKPALSLGAAFVSPSLTIDFADADARTSRTLAGSRRASVDIDTQFAIRMPSPVNIQVGQA
VGIAGPIAMTLSRDVVMDGAFTGSAGASSMSTAGDYGEWNPNDAANVVVDLPRWTAMVQSAYRAYNAAIVANLLAARGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32683; Mature: 32683

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKWMLVSAALCLAAAPALAQDQAGAPQVRLSKPNSYGLKDNKIAVLSYAINFVTGQRAS
CCCHHHHHHHHHHHHCCCHHCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEHHHCCCCCC
ANASVGTKARAGATLVGVDEATMRRLANEAHADLKAQLTAAGIPIVDDATIAEVTRTAGV
CCCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCEEEEEECCCCEECCCHHHHHHHHCCE
TLLPGNRDANRDGGMVIGSGVKKSYVSVGADAAPLTDLYQSAGKVGGFGMLATLGKGNKL
EEECCCCCCCCCCCEEEECCCHHHHHHCCCCCCHHHHHHHHHCCCCCCCCEEECCCCCCC
SKPALSLGAAFVSPSLTIDFADADARTSRTLAGSRRASVDIDTQFAIRMPSPVNIQVGQA
CCHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCEEEECCEEEEECCCCCEEEECCE
VGIAGPIAMTLSRDVVMDGAFTGSAGASSMSTAGDYGEWNPNDAANVVVDLPRWTAMVQS
ECCCCHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHH
AYRAYNAAIVANLLAARGR
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRKWMLVSAALCLAAAPALAQDQAGAPQVRLSKPNSYGLKDNKIAVLSYAINFVTGQRAS
CCCHHHHHHHHHHHHCCCHHCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEHHHCCCCCC
ANASVGTKARAGATLVGVDEATMRRLANEAHADLKAQLTAAGIPIVDDATIAEVTRTAGV
CCCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCEEEEEECCCCEECCCHHHHHHHHCCE
TLLPGNRDANRDGGMVIGSGVKKSYVSVGADAAPLTDLYQSAGKVGGFGMLATLGKGNKL
EEECCCCCCCCCCCEEEECCCHHHHHHCCCCCCHHHHHHHHHCCCCCCCCEEECCCCCCC
SKPALSLGAAFVSPSLTIDFADADARTSRTLAGSRRASVDIDTQFAIRMPSPVNIQVGQA
CCHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCEEEECCEEEEECCCCCEEEECCE
VGIAGPIAMTLSRDVVMDGAFTGSAGASSMSTAGDYGEWNPNDAANVVVDLPRWTAMVQS
ECCCCHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHH
AYRAYNAAIVANLLAARGR
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA