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The map label for this gene is ydjJ [C]

Identifier: 146343795

GI number: 146343795

Start: 7353401

End: 7355593

Strand: Reverse

Name: ydjJ [C]

Synonym: BRADO7044

Alternate gene names: 146343795

Gene position: 7355593-7353401 (Counterclockwise)

Preceding gene: 146343796

Following gene: 146343794

Centisome position: 98.65

GC content: 63.89

Gene sequence:

>2193_bases
GTGAAGCAGATCGCGCAAAACTATAAGACTGGTGAGCTCAAGGTGATCGAAGTGCCCGCGCCGCGCTGCCGCCCGGGCGG
CGTTCTGGTGCAAACGGCATTCTCGGCCGTCTCCACCGGCACCGAGCTGATGAAGTTTTCCGAAGGCCGCCTGTCGCTGA
TCGGCAAGGCGCGCGCGCGACCGGATCAGGTCGCCAAGGTGGTCCGATCCGTGCAGCAGCAGGGCCTGCTCGCGACCTAC
AACAAGGTCATGAACAAGCTCGATTCGTTCACCCCGCTCGGCTACTCGAGCTCAGGCATCGTGGTCGAGATCGGCGAAGG
CGTCAGCGGCTTCCATGTCGGCCAGCGCGTCTGTTGTGCCGGCAATCAATACGCCACTCACGCCGAATACAACTGGGTGC
CGACCAACCTCTGCGTTCCGCTTCCCGACGGTGCCCCGCTCGACCAGGCCGCCTTTACCACCATAGCCGCGATCGCTCTG
CAGGCGATGCGCCAATCGGAAACGCGCCTGGGCGAGACCGTGTGCGTCATCGGTCTCGGCCTGATCGGCCAGATCCTCGT
GCGATTGCTGCGCAGCGCCGGGGTGCGTACGGTGGGCCTGGATCGCCTCGAAACGCGCTGCCGCAGCGCCGAGGCCGCCG
GAGCGGTCCTTTGCGCGGTCGCCTCGGATGACAGCTCGGAGCAATTCGCGAGCAGGGTCACGCAACTGACTGCAGGGAAT
GGCGTCGATTGCGTGTTCATCACCGCGGGCAGCAACGATCCCGATCTTGCTAAGCGCGCGGCGGGCTTGTTGCGGGATCG
CGGCCGGATCGTCGACATCGGCAAATGCACGCTGAACCTGCCGTGGAACGATTTCTACGACAAGGAACTGGATGTCCGCT
TTTCCCGCTCGTACGGGCCCGGCCGCTACGATCCGCTCTATGAGGAAGGGGGCATTGATTATCCCATCGGCCAGGTGCGC
TGGACCGAGCGACGCAACATGGAGGCGATTGTCGGTTTGCTCGCGGATGGACGTCTCGACTTTTCGTCCCTGGTAACCGA
TGTCGTGGCGTTCGATGCCGCTGTTTCTGCGTTCGAGCGTCTGAACAAGGGAAGTGCTGATAGCCTTGGCGTGCTGTTTT
CCTACGCGCCGGATGCCGCGCGCTCGGACCGCATTGCGTATCGGCCGCGAGCCGTCGCGAGCAAGGATCGGGTCCGGCTG
GGCGTGATCGGGGCAGGCGCCTATGCTTCCAGCATGCTGCTGCCCCAACTCGTGAGCAATGATCAGGTCGAGCTGGTCGA
GGTTGTCACCAACACCGGCCTCAGCGGCGCGACCGCCGCCCGCAAGTTCGGCTTTGCGCGCGCATCGACGAACGCATCGA
CCGTGCTCGAGGCCGACGACATCGATGCCGTTCTGATCGCGACGCGTCATGCCTCGCATGCCGATCTCGCGGCTCGGGCG
CTACGCGCCGGCAAGGCCGTGTTTGTCGAAAAGCCACTGGCGCTCGACCGGACGTCGCTTGCCCGGGTGATCGAAACCGT
TCATCAGACCGGTAACGACCGTTTGATGGTCGGCTTCAATCGCCGCTTCTCGCCGCTGCTCTCCTCGGCGCGTGATTCGT
TTTCTAGTTCGGGTCCGCAAATCCTGCACTACCGTGTGGTCGCCGGACCACTGGAGAAGACATCCTGGTATTCCCAGGCC
GAAACCGAGGGAAGCCGCTTTGCCGGTGAAGGCGGTCACTTCATCGATGCGCTCAGCTGGTGGGTCGGATCCGAGCCCGT
CCGGGTCACGGCTTCGGCGGCCGGCAGCGATATCGACAACCTGGTGGCGACCCTCACCTTCGACGATGGCTCGGTCGCGA
CATTGAGCTACCTGACCGGAGGTGACTCACGGGTGCCAAAGGAGCTGCTCGAAGCCTCTGGGTCCGCGGGCTTTGTGAAG
TTTGACAACTTCTCCCGCGTCGAGAGCTGGAGCAAAGGGAGCCGCTCTTCGAAGAAGGCTCCGTTGGATAAGGGGCAGGG
GCCCATGCTGTCGGCCTTCGTCGACTGTGTCCGCTCAGGAAAGCCGATGCCGATTCCGTTTCAATCCTTGCTCGCGACCA
CCCGCGCCACTCTGGCGGTCCAGGAGAGCGCCGCCACGGGGCTTCTCGTCGATCTCAGATCGGCGACCCCGCCGGAAATT
GAGAACGAACTCTCGGCGTCGGCGATCCCATGA

Upstream 100 bases:

>100_bases
TGCTCACCGAGGAGCAAAACTAACCATCGGGTTTGTCTCTGCTTTTATGAAGCGAGCGGCCGCGCTAGAACGCACCCGTT
GATCGGACACAGAACAGACC

Downstream 100 bases:

>100_bases
ATCCGGGCTGGTACCTCCGCCGGCTCATCCGCATGGAGCTGTCCGAGCTCAGCGGCCGCGTTCAGGATCAGCTCTGGCGC
CTTTTTTGGCGCCTGCAAGC

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 730; Mature: 730

Protein sequence:

>730_residues
MKQIAQNYKTGELKVIEVPAPRCRPGGVLVQTAFSAVSTGTELMKFSEGRLSLIGKARARPDQVAKVVRSVQQQGLLATY
NKVMNKLDSFTPLGYSSSGIVVEIGEGVSGFHVGQRVCCAGNQYATHAEYNWVPTNLCVPLPDGAPLDQAAFTTIAAIAL
QAMRQSETRLGETVCVIGLGLIGQILVRLLRSAGVRTVGLDRLETRCRSAEAAGAVLCAVASDDSSEQFASRVTQLTAGN
GVDCVFITAGSNDPDLAKRAAGLLRDRGRIVDIGKCTLNLPWNDFYDKELDVRFSRSYGPGRYDPLYEEGGIDYPIGQVR
WTERRNMEAIVGLLADGRLDFSSLVTDVVAFDAAVSAFERLNKGSADSLGVLFSYAPDAARSDRIAYRPRAVASKDRVRL
GVIGAGAYASSMLLPQLVSNDQVELVEVVTNTGLSGATAARKFGFARASTNASTVLEADDIDAVLIATRHASHADLAARA
LRAGKAVFVEKPLALDRTSLARVIETVHQTGNDRLMVGFNRRFSPLLSSARDSFSSSGPQILHYRVVAGPLEKTSWYSQA
ETEGSRFAGEGGHFIDALSWWVGSEPVRVTASAAGSDIDNLVATLTFDDGSVATLSYLTGGDSRVPKELLEASGSAGFVK
FDNFSRVESWSKGSRSSKKAPLDKGQGPMLSAFVDCVRSGKPMPIPFQSLLATTRATLAVQESAATGLLVDLRSATPPEI
ENELSASAIP

Sequences:

>Translated_730_residues
MKQIAQNYKTGELKVIEVPAPRCRPGGVLVQTAFSAVSTGTELMKFSEGRLSLIGKARARPDQVAKVVRSVQQQGLLATY
NKVMNKLDSFTPLGYSSSGIVVEIGEGVSGFHVGQRVCCAGNQYATHAEYNWVPTNLCVPLPDGAPLDQAAFTTIAAIAL
QAMRQSETRLGETVCVIGLGLIGQILVRLLRSAGVRTVGLDRLETRCRSAEAAGAVLCAVASDDSSEQFASRVTQLTAGN
GVDCVFITAGSNDPDLAKRAAGLLRDRGRIVDIGKCTLNLPWNDFYDKELDVRFSRSYGPGRYDPLYEEGGIDYPIGQVR
WTERRNMEAIVGLLADGRLDFSSLVTDVVAFDAAVSAFERLNKGSADSLGVLFSYAPDAARSDRIAYRPRAVASKDRVRL
GVIGAGAYASSMLLPQLVSNDQVELVEVVTNTGLSGATAARKFGFARASTNASTVLEADDIDAVLIATRHASHADLAARA
LRAGKAVFVEKPLALDRTSLARVIETVHQTGNDRLMVGFNRRFSPLLSSARDSFSSSGPQILHYRVVAGPLEKTSWYSQA
ETEGSRFAGEGGHFIDALSWWVGSEPVRVTASAAGSDIDNLVATLTFDDGSVATLSYLTGGDSRVPKELLEASGSAGFVK
FDNFSRVESWSKGSRSSKKAPLDKGQGPMLSAFVDCVRSGKPMPIPFQSLLATTRATLAVQESAATGLLVDLRSATPPEI
ENELSASAIP
>Mature_730_residues
MKQIAQNYKTGELKVIEVPAPRCRPGGVLVQTAFSAVSTGTELMKFSEGRLSLIGKARARPDQVAKVVRSVQQQGLLATY
NKVMNKLDSFTPLGYSSSGIVVEIGEGVSGFHVGQRVCCAGNQYATHAEYNWVPTNLCVPLPDGAPLDQAAFTTIAAIAL
QAMRQSETRLGETVCVIGLGLIGQILVRLLRSAGVRTVGLDRLETRCRSAEAAGAVLCAVASDDSSEQFASRVTQLTAGN
GVDCVFITAGSNDPDLAKRAAGLLRDRGRIVDIGKCTLNLPWNDFYDKELDVRFSRSYGPGRYDPLYEEGGIDYPIGQVR
WTERRNMEAIVGLLADGRLDFSSLVTDVVAFDAAVSAFERLNKGSADSLGVLFSYAPDAARSDRIAYRPRAVASKDRVRL
GVIGAGAYASSMLLPQLVSNDQVELVEVVTNTGLSGATAARKFGFARASTNASTVLEADDIDAVLIATRHASHADLAARA
LRAGKAVFVEKPLALDRTSLARVIETVHQTGNDRLMVGFNRRFSPLLSSARDSFSSSGPQILHYRVVAGPLEKTSWYSQA
ETEGSRFAGEGGHFIDALSWWVGSEPVRVTASAAGSDIDNLVATLTFDDGSVATLSYLTGGDSRVPKELLEASGSAGFVK
FDNFSRVESWSKGSRSSKKAPLDKGQGPMLSAFVDCVRSGKPMPIPFQSLLATTRATLAVQESAATGLLVDLRSATPPEI
ENELSASAIP

Specific function: Unknown

COG id: COG1063

COG function: function code ER; Threonine dehydrogenase and related Zn-dependent dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1788073, Length=297, Percent_Identity=26.2626262626263, Blast_Score=68, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: NA

Molecular weight: Translated: 77860; Mature: 77860

Theoretical pI: Translated: 7.39; Mature: 7.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQIAQNYKTGELKVIEVPAPRCRPGGVLVQTAFSAVSTGTELMKFSEGRLSLIGKARAR
CCCHHCCCCCCCEEEEECCCCCCCCCCEEHHHHHHHHHCCHHHHHHCCCCEEEHCCCCCC
PDQVAKVVRSVQQQGLLATYNKVMNKLDSFTPLGYSSSGIVVEIGEGVSGFHVGQRVCCA
HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHCCCCEEC
GNQYATHAEYNWVPTNLCVPLPDGAPLDQAAFTTIAAIALQAMRQSETRLGETVCVIGLG
CCCCCCCCCCCEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LIGQILVRLLRSAGVRTVGLDRLETRCRSAEAAGAVLCAVASDDSSEQFASRVTQLTAGN
HHHHHHHHHHHHCCCCEECHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCC
GVDCVFITAGSNDPDLAKRAAGLLRDRGRIVDIGKCTLNLPWNDFYDKELDVRFSRSYGP
CCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCEEEECCCCC
GRYDPLYEEGGIDYPIGQVRWTERRNMEAIVGLLADGRLDFSSLVTDVVAFDAAVSAFER
CCCCCCHHCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
LNKGSADSLGVLFSYAPDAARSDRIAYRPRAVASKDRVRLGVIGAGAYASSMLLPQLVSN
HCCCCCCCCEEEEEECCCCCCCCCEEECCCHHCCCCCEEEEEEECCHHHHHHHHHHHHCC
DQVELVEVVTNTGLSGATAARKFGFARASTNASTVLEADDIDAVLIATRHASHADLAARA
CCCEEHHHHHCCCCCCHHHHHHHCCCCCCCCCCEEEECCCCCEEEEEECCCCHHHHHHHH
LRAGKAVFVEKPLALDRTSLARVIETVHQTGNDRLMVGFNRRFSPLLSSARDSFSSSGPQ
HHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCC
ILHYRVVAGPLEKTSWYSQAETEGSRFAGEGGHFIDALSWWVGSEPVRVTASAAGSDIDN
EEEEEEEECCCHHHHCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCC
LVATLTFDDGSVATLSYLTGGDSRVPKELLEASGSAGFVKFDNFSRVESWSKGSRSSKKA
EEEEEEECCCCEEEEEEECCCCCCCHHHHHHCCCCCCEEEECCCHHHHHHCCCCCCCCCC
PLDKGQGPMLSAFVDCVRSGKPMPIPFQSLLATTRATLAVQESAATGLLVDLRSATPPEI
CCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHEEECCCCCEEEEEECCCCCCHH
ENELSASAIP
HHCCCCCCCC
>Mature Secondary Structure
MKQIAQNYKTGELKVIEVPAPRCRPGGVLVQTAFSAVSTGTELMKFSEGRLSLIGKARAR
CCCHHCCCCCCCEEEEECCCCCCCCCCEEHHHHHHHHHCCHHHHHHCCCCEEEHCCCCCC
PDQVAKVVRSVQQQGLLATYNKVMNKLDSFTPLGYSSSGIVVEIGEGVSGFHVGQRVCCA
HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHCCCCEEC
GNQYATHAEYNWVPTNLCVPLPDGAPLDQAAFTTIAAIALQAMRQSETRLGETVCVIGLG
CCCCCCCCCCCEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LIGQILVRLLRSAGVRTVGLDRLETRCRSAEAAGAVLCAVASDDSSEQFASRVTQLTAGN
HHHHHHHHHHHHCCCCEECHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCC
GVDCVFITAGSNDPDLAKRAAGLLRDRGRIVDIGKCTLNLPWNDFYDKELDVRFSRSYGP
CCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCEEEECCCCC
GRYDPLYEEGGIDYPIGQVRWTERRNMEAIVGLLADGRLDFSSLVTDVVAFDAAVSAFER
CCCCCCHHCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
LNKGSADSLGVLFSYAPDAARSDRIAYRPRAVASKDRVRLGVIGAGAYASSMLLPQLVSN
HCCCCCCCCEEEEEECCCCCCCCCEEECCCHHCCCCCEEEEEEECCHHHHHHHHHHHHCC
DQVELVEVVTNTGLSGATAARKFGFARASTNASTVLEADDIDAVLIATRHASHADLAARA
CCCEEHHHHHCCCCCCHHHHHHHCCCCCCCCCCEEEECCCCCEEEEEECCCCHHHHHHHH
LRAGKAVFVEKPLALDRTSLARVIETVHQTGNDRLMVGFNRRFSPLLSSARDSFSSSGPQ
HHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCC
ILHYRVVAGPLEKTSWYSQAETEGSRFAGEGGHFIDALSWWVGSEPVRVTASAAGSDIDN
EEEEEEEECCCHHHHCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCC
LVATLTFDDGSVATLSYLTGGDSRVPKELLEASGSAGFVKFDNFSRVESWSKGSRSSKKA
EEEEEEECCCCEEEEEEECCCCCCCHHHHHHCCCCCCEEEECCCHHHHHHCCCCCCCCCC
PLDKGQGPMLSAFVDCVRSGKPMPIPFQSLLATTRATLAVQESAATGLLVDLRSATPPEI
CCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHEEECCCCCEEEEEECCCCCCHH
ENELSASAIP
HHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7845353 [H]