Click here to switch to the map view.

The map label for this gene is 146343796

Identifier: 146343796

GI number: 146343796

Start: 7355671

End: 7356804

Strand: Reverse

Name: 146343796

Synonym: BRADO7045

Alternate gene names: NA

Gene position: 7356804-7355671 (Counterclockwise)

Preceding gene: 146343800

Following gene: 146343795

Centisome position: 98.66

GC content: 64.81

Gene sequence:

>1134_bases
ATGGCGGCTTCCGCGGAGCGGGCGCGGACCCCCATTCCGTCAAGCTATTTCGGCATGACCGTCAACGCGATCGGGCTGCC
GAGGCCGTGGCCCACGCTCGATTTCAACGCCGTTCGGCTGTGGGGCGCGATCTATTGGGCGCAGGTCAATCCAGCCCCTG
GCTCCTATAACTGGACGCGCTTCGACCGCATTGTTCAAGAGGCCGAGCAGCGCCGCCTCGATGTCGTGTTCAATCTCGCT
TATACGCCGCGCTGGGCAGCGGCCTCCCGTGACGCCTTGCCCGCCTTCAGCCCTGGAGCGAGTTCGCCGCCCGCCGATCT
CGGCGTGTGGGAGGATTGGGTTCGCTCGGCGGTGACGAGAGCCGCTGGGCGGATCCGCTATTGGGAAATCTGGAACGAGC
CGGAGGATCCGAAATACTATTCCGGCGACGTCGAGACGATGGTCAGGCTCCAGCAGCGGGCCTATGAGATCATCAAGTCG
ATCGATCCGACACTGATCGTCCTGACGCCGTCATCGAATGGAACCGCTGAGGGTTACCGCTGGCAAGCTGCTTTCCTGGA
GAAGGGCGGCGGCCGCTATGCCGATGTCTTTGCGTTCCATGGCTATGTGAGCGATCCGGAAGCGGTGCTGCCCGTGATAC
AGCGGTTCAAGGGCATGCTGGCCGCACAAGGCTTGCAGGGGAAGCCGATATGGGACACGGAGGCTGGCTGGCCGCTGAAG
GACGCCAATCAGGCAGCCTATCTGGCCCGCTCCTATCTGCTGAAATGGGCGATGGGCGTGGATCGGTCCTACTGGTACGA
GGTCGACGGCGGCGGCTCCGATTTCGGACGGCTGTGGGAGCCATCCTCGGGGCTGCTGGCCTCGGGCGTGGCGTTCCAGA
CGGTCCGGCACTGGCTCGAGGGGGCGCGAGTGCAGGGTTTGTCGCGCCTTGGCCGCTCGCTGTGGCGGCTGGACCTCGTT
CTCTCCGACGGCCACAAGGCCCAGGTCGTGTGGAGTGCAGCGGGCAACGCGGCCTATCAGGTCAGCGGGCGCTATTGGCT
TCGCCATGACCTTGACGGCGGCACACATGCGATCGTCGACGGTCGGTTGGAGGTCGGACCCCGGCCGGTCATGCTCACCG
AGGAGCAAAACTAA

Upstream 100 bases:

>100_bases
CCGCGGCGGCCACAGGCTGCGGACGGCGATTTTGCTTCTTTTGGTGGGGTGTGGCGCGATCGCTGCCTACAGGGTTTTCA
ACCCGTGGGGCGACGAGGCG

Downstream 100 bases:

>100_bases
CCATCGGGTTTGTCTCTGCTTTTATGAAGCGAGCGGCCGCGCTAGAACGCACCCGTTGATCGGACACAGAACAGACCGTG
AAGCAGATCGCGCAAAACTA

Product: putative glycosidase

Products: NA

Alternate protein names: Glycosidase; Glycoside Hydrolase Family

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MAASAERARTPIPSSYFGMTVNAIGLPRPWPTLDFNAVRLWGAIYWAQVNPAPGSYNWTRFDRIVQEAEQRRLDVVFNLA
YTPRWAAASRDALPAFSPGASSPPADLGVWEDWVRSAVTRAAGRIRYWEIWNEPEDPKYYSGDVETMVRLQQRAYEIIKS
IDPTLIVLTPSSNGTAEGYRWQAAFLEKGGGRYADVFAFHGYVSDPEAVLPVIQRFKGMLAAQGLQGKPIWDTEAGWPLK
DANQAAYLARSYLLKWAMGVDRSYWYEVDGGGSDFGRLWEPSSGLLASGVAFQTVRHWLEGARVQGLSRLGRSLWRLDLV
LSDGHKAQVVWSAAGNAAYQVSGRYWLRHDLDGGTHAIVDGRLEVGPRPVMLTEEQN

Sequences:

>Translated_377_residues
MAASAERARTPIPSSYFGMTVNAIGLPRPWPTLDFNAVRLWGAIYWAQVNPAPGSYNWTRFDRIVQEAEQRRLDVVFNLA
YTPRWAAASRDALPAFSPGASSPPADLGVWEDWVRSAVTRAAGRIRYWEIWNEPEDPKYYSGDVETMVRLQQRAYEIIKS
IDPTLIVLTPSSNGTAEGYRWQAAFLEKGGGRYADVFAFHGYVSDPEAVLPVIQRFKGMLAAQGLQGKPIWDTEAGWPLK
DANQAAYLARSYLLKWAMGVDRSYWYEVDGGGSDFGRLWEPSSGLLASGVAFQTVRHWLEGARVQGLSRLGRSLWRLDLV
LSDGHKAQVVWSAAGNAAYQVSGRYWLRHDLDGGTHAIVDGRLEVGPRPVMLTEEQN
>Mature_376_residues
AASAERARTPIPSSYFGMTVNAIGLPRPWPTLDFNAVRLWGAIYWAQVNPAPGSYNWTRFDRIVQEAEQRRLDVVFNLAY
TPRWAAASRDALPAFSPGASSPPADLGVWEDWVRSAVTRAAGRIRYWEIWNEPEDPKYYSGDVETMVRLQQRAYEIIKSI
DPTLIVLTPSSNGTAEGYRWQAAFLEKGGGRYADVFAFHGYVSDPEAVLPVIQRFKGMLAAQGLQGKPIWDTEAGWPLKD
ANQAAYLARSYLLKWAMGVDRSYWYEVDGGGSDFGRLWEPSSGLLASGVAFQTVRHWLEGARVQGLSRLGRSLWRLDLVL
SDGHKAQVVWSAAGNAAYQVSGRYWLRHDLDGGTHAIVDGRLEVGPRPVMLTEEQN

Specific function: Unknown

COG id: COG3664

COG function: function code G; Beta-xylosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42112; Mature: 41981

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAASAERARTPIPSSYFGMTVNAIGLPRPWPTLDFNAVRLWGAIYWAQVNPAPGSYNWTR
CCCCCCHHCCCCCCCHHCEEEEEECCCCCCCCCCCHHHEEEEEEEEEEECCCCCCCCHHH
FDRIVQEAEQRRLDVVFNLAYTPRWAAASRDALPAFSPGASSPPADLGVWEDWVRSAVTR
HHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
AAGRIRYWEIWNEPEDPKYYSGDVETMVRLQQRAYEIIKSIDPTLIVLTPSSNGTAEGYR
HHCCEEEEEECCCCCCCCEECCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEE
WQAAFLEKGGGRYADVFAFHGYVSDPEAVLPVIQRFKGMLAAQGLQGKPIWDTEAGWPLK
EEEEHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
DANQAAYLARSYLLKWAMGVDRSYWYEVDGGGSDFGRLWEPSSGLLASGVAFQTVRHWLE
CCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCHHCHHHHHHHHHHHC
GARVQGLSRLGRSLWRLDLVLSDGHKAQVVWSAAGNAAYQVSGRYWLRHDLDGGTHAIVD
CHHHHHHHHHHHHHHEEEEEEECCCEEEEEEEECCCEEEEECCEEEEEEECCCCCEEEEE
GRLEVGPRPVMLTEEQN
CEEECCCCCEEEECCCC
>Mature Secondary Structure 
AASAERARTPIPSSYFGMTVNAIGLPRPWPTLDFNAVRLWGAIYWAQVNPAPGSYNWTR
CCCCCHHCCCCCCCHHCEEEEEECCCCCCCCCCCHHHEEEEEEEEEEECCCCCCCCHHH
FDRIVQEAEQRRLDVVFNLAYTPRWAAASRDALPAFSPGASSPPADLGVWEDWVRSAVTR
HHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
AAGRIRYWEIWNEPEDPKYYSGDVETMVRLQQRAYEIIKSIDPTLIVLTPSSNGTAEGYR
HHCCEEEEEECCCCCCCCEECCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEE
WQAAFLEKGGGRYADVFAFHGYVSDPEAVLPVIQRFKGMLAAQGLQGKPIWDTEAGWPLK
EEEEHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
DANQAAYLARSYLLKWAMGVDRSYWYEVDGGGSDFGRLWEPSSGLLASGVAFQTVRHWLE
CCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCHHCHHHHHHHHHHHC
GARVQGLSRLGRSLWRLDLVLSDGHKAQVVWSAAGNAAYQVSGRYWLRHDLDGGTHAIVD
CHHHHHHHHHHHHHHEEEEEEECCCEEEEEEEECCCEEEEECCEEEEEEECCCCCEEEEE
GRLEVGPRPVMLTEEQN
CEEECCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA