Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is fdsD

Identifier: 146341849

GI number: 146341849

Start: 5174141

End: 5174386

Strand: Direct

Name: fdsD

Synonym: BRADO4979

Alternate gene names: NA

Gene position: 5174141-5174386 (Clockwise)

Preceding gene: 146341848

Following gene: 146341852

Centisome position: 69.39

GC content: 63.01

Gene sequence:

>246_bases
ATGTCGCATAGCAGCACCCACGACCGCCTCGTCTACATGGCCAACCAGATCGGAAAATTCTTCCAGAGCCAGGGCCGGGA
AAAAGAGGTCGCCGGCGTCGCCGAGCACATCAAGAAGTTCTGGGACCCGCGCATGCTCAAGACGATCTACGCGCATCACG
ACGCCGGCGGCGAAGGCCTGGACCCGGCCGTGAAGGACGCCATCGGCAAGCTGAAGGACGCGGCGGTCGCGAAGGAGAAG
GCGTAA

Upstream 100 bases:

>100_bases
GCTGTCGCGCGAAATGACGGCTTCGAAATATTCACCCACCCCCACCGCATCGTGGCGAGCGCGGAGCCGCGCGCGCAATC
ACCTCAGACGGAAAAGCCCC

Downstream 100 bases:

>100_bases
CGGGCACGATCCCGTAGCCCGCATGAGCGAAGCGACATGCGGGGCGGTGTTTCCGAACACTCGGAGCAAACTTGAACCCG
GATGTCGCTACGCTCATCCG

Product: putative formate dehydrogenase subunit delta

Products: CO2; NADH

Alternate protein names: NAD-Dependent Formate Dehydrogenase; Formate Dehydrogenase Delta Subunit; NAD-Dependent Formate Dehydrogenase Delta Subunit Protein; Formate Dehydrogenase Subunit Delta

Number of amino acids: Translated: 81; Mature: 80

Protein sequence:

>81_residues
MSHSSTHDRLVYMANQIGKFFQSQGREKEVAGVAEHIKKFWDPRMLKTIYAHHDAGGEGLDPAVKDAIGKLKDAAVAKEK
A

Sequences:

>Translated_81_residues
MSHSSTHDRLVYMANQIGKFFQSQGREKEVAGVAEHIKKFWDPRMLKTIYAHHDAGGEGLDPAVKDAIGKLKDAAVAKEK
A
>Mature_80_residues
SHSSTHDRLVYMANQIGKFFQSQGREKEVAGVAEHIKKFWDPRMLKTIYAHHDAGGEGLDPAVKDAIGKLKDAAVAKEKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.2.1.2

Molecular weight: Translated: 8963; Mature: 8832

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHSSTHDRLVYMANQIGKFFQSQGREKEVAGVAEHIKKFWDPRMLKTIYAHHDAGGEGL
CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCC
DPAVKDAIGKLKDAAVAKEKA
CHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SHSSTHDRLVYMANQIGKFFQSQGREKEVAGVAEHIKKFWDPRMLKTIYAHHDAGGEGL
CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCC
DPAVKDAIGKLKDAAVAKEKA
CHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: formate; NAD+

Specific reaction: formate + NAD+ = CO2 + NADH

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA