Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is paaF [C]
Identifier: 146340659
GI number: 146340659
Start: 3870700
End: 3871467
Strand: Reverse
Name: paaF [C]
Synonym: BRADO3707
Alternate gene names: 146340659
Gene position: 3871467-3870700 (Counterclockwise)
Preceding gene: 146340662
Following gene: 146340658
Centisome position: 51.92
GC content: 68.49
Gene sequence:
>768_bases ATGACCCCGTCCTATTTCACCCGCTTCGCCCATCTGCGGCTGACCCGCGATGCCCAGGGCGTGCTCCTGGTCGAGATGCA CAGCGACGGCGGGCCGATCCGCTTCGATGCGCGCGACCACACCGAATTTACCGACGCCTTCTATGAGATCGGCCGCGACC GCGACAACAAGATCGTGATCCTGACGGGCGTCGGCGACTACATGGCCGAGATCGACTTCGCGAGCTTCGGCAATGTCGGC GATGCCAACGCCTGGTCGCGGGTCCATGACGAGGGCACGCAGATCCTGGAGAACATCGCCAACATCCGCGTGCCGCTGAT CGCCGCGATCGAGGGCCGCGCCCACATCCACACCGAATACGCGCTGTTCGCCGACGTCGTCATTGCCGGCCGCGGCGCCA CCTTCCACGATCTGCCGCACTTCGCCGGCGGCATCGTGCCGGGCGACGGCATCTTCACGACCTGGTCGTATCGCGCCGGC GCCGGCCGCGCCCAGGCCTTCCTCCTGAACCCGCAGCCGCTGTCGGCGCAGGAGGCCGCGAACTGGGGCGTCGTCAACCA CGTCGTCGACGACGGCACCACGGTCGCCTTCGCCCGCGAGCTCGCCGCGCTCTATCTGCGCCAGCCCGAGGTCACCCGCC GCAACAGCCGCATCCATTTCGTCCAGCCGCTGAAGGAGCGCATCGTCCGCGAGGTCGGCTATGGCCTCGCCCTCGAGGGC GCCAGCGCCAACGCCCTGGTGCAGCAGATGATGGCGGGACAGCGCTGA
Upstream 100 bases:
>100_bases GATATCGATCCGACGAGAATTATCCAAGGGCACCGAATGAGCCATGCTCCTCCCATCAGCAACGGCCGGCGCATCGCCGG CAACCGCCACGGAGAGAGCC
Downstream 100 bases:
>100_bases GTTCGTCCGCTCGATGTGAACCGAGCTCATCCTCAACAACGCTGCGCTCCCTCTCCCCGTTCTTGGGCGCACGTGAGGAG CTTCGCTCGCGCTGAGAGGG
Product: putative 6-oxocamphor hydrolase
Products: trans(or 3)-enoyl-CoA; H2O [C]
Alternate protein names: Enoyl-CoA Hydratase; Enoyl-CoA Hydratase EchA; 6-Oxocamphor Hydrolase; Short Chain Enoyl-CoA Hydratase; Enoyl-CoA Hydratase/Carnithine Racemase; Enoyl-CoA Hydratase/Isomerase Family; Enoyl-CoA Hydratase/Isomerase Family Protein
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MTPSYFTRFAHLRLTRDAQGVLLVEMHSDGGPIRFDARDHTEFTDAFYEIGRDRDNKIVILTGVGDYMAEIDFASFGNVG DANAWSRVHDEGTQILENIANIRVPLIAAIEGRAHIHTEYALFADVVIAGRGATFHDLPHFAGGIVPGDGIFTTWSYRAG AGRAQAFLLNPQPLSAQEAANWGVVNHVVDDGTTVAFARELAALYLRQPEVTRRNSRIHFVQPLKERIVREVGYGLALEG ASANALVQQMMAGQR
Sequences:
>Translated_255_residues MTPSYFTRFAHLRLTRDAQGVLLVEMHSDGGPIRFDARDHTEFTDAFYEIGRDRDNKIVILTGVGDYMAEIDFASFGNVG DANAWSRVHDEGTQILENIANIRVPLIAAIEGRAHIHTEYALFADVVIAGRGATFHDLPHFAGGIVPGDGIFTTWSYRAG AGRAQAFLLNPQPLSAQEAANWGVVNHVVDDGTTVAFARELAALYLRQPEVTRRNSRIHFVQPLKERIVREVGYGLALEG ASANALVQQMMAGQR >Mature_254_residues TPSYFTRFAHLRLTRDAQGVLLVEMHSDGGPIRFDARDHTEFTDAFYEIGRDRDNKIVILTGVGDYMAEIDFASFGNVGD ANAWSRVHDEGTQILENIANIRVPLIAAIEGRAHIHTEYALFADVVIAGRGATFHDLPHFAGGIVPGDGIFTTWSYRAGA GRAQAFLLNPQPLSAQEAANWGVVNHVVDDGTTVAFARELAALYLRQPEVTRRNSRIHFVQPLKERIVREVGYGLALEGA SANALVQQMMAGQR
Specific function: Could Possibly Oxidizes Fatty Acids Using Specific Components (By Similarity). [C]
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 4.2.1.17 [C]
Molecular weight: Translated: 28059; Mature: 27928
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPSYFTRFAHLRLTRDAQGVLLVEMHSDGGPIRFDARDHTEFTDAFYEIGRDRDNKIVI CCCHHHHHHHHEEEECCCCCEEEEEEECCCCCEEECCCCCCHHHHHHHHHCCCCCCEEEE LTGVGDYMAEIDFASFGNVGDANAWSRVHDEGTQILENIANIRVPLIAAIEGRAHIHTEY EEECCHHHHHCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCEEEEHHH ALFADVVIAGRGATFHDLPHFAGGIVPGDGIFTTWSYRAGAGRAQAFLLNPQPLSAQEAA HHHHHHHEECCCCCHHCCHHHHCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCHHHHC NWGVVNHVVDDGTTVAFARELAALYLRQPEVTRRNSRIHFVQPLKERIVREVGYGLALEG CCCHHEEECCCCCHHHHHHHHHHHHHCCCCHHHCCCEEEEHHHHHHHHHHHHCCCEEECC ASANALVQQMMAGQR CCHHHHHHHHHCCCC >Mature Secondary Structure TPSYFTRFAHLRLTRDAQGVLLVEMHSDGGPIRFDARDHTEFTDAFYEIGRDRDNKIVI CCHHHHHHHHEEEECCCCCEEEEEEECCCCCEEECCCCCCHHHHHHHHHCCCCCCEEEE LTGVGDYMAEIDFASFGNVGDANAWSRVHDEGTQILENIANIRVPLIAAIEGRAHIHTEY EEECCHHHHHCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCEEEEHHH ALFADVVIAGRGATFHDLPHFAGGIVPGDGIFTTWSYRAGAGRAQAFLLNPQPLSAQEAA HHHHHHHEECCCCCHHCCHHHHCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCHHHHC NWGVVNHVVDDGTTVAFARELAALYLRQPEVTRRNSRIHFVQPLKERIVREVGYGLALEG CCCHHEEECCCCCHHHHHHHHHHHHHCCCCHHHCCCEEEEHHHHHHHHHHHHCCCEEECC ASANALVQQMMAGQR CCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 0.05 {crotonyl-CoA}} 0.008 {2-decenoyl-CoA}} [C]
Substrates: (3S)-hydroxyacyl-CoA [C]
Specific reaction: (3S)-hydroxyacyl-CoA = trans(or 3)-enoyl-CoA + H2O [C]
General reaction: addition (of H2O to carbon carbon double bondelimination (of H2O C-O bond cleavagehydration [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA