Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146340658
Identifier: 146340658
GI number: 146340658
Start: 3869784
End: 3870440
Strand: Reverse
Name: 146340658
Synonym: BRADO3706
Alternate gene names: NA
Gene position: 3870440-3869784 (Counterclockwise)
Preceding gene: 146340659
Following gene: 146340657
Centisome position: 51.91
GC content: 68.49
Gene sequence:
>657_bases ATGTCTCTGCAATCCGAACTCGACGCCTTCAAATCTGCTTGGACCTCGCGTGTCGGCGACGACATCGCCACGCTGGTCGA CACCGACAACGCAGCCCTCCAAGACCTCGCGGACCGCGCCGTCAAGGAAGGCGCCGCCTTCCCCGCCCCCACCCTCCGCA ACCACAAAGGCGGCGTCACCGACCTCGGGGCGCTGATGGCGGAGAGCGCGCTGATCGTGACCTTCTACCGCGGCGGCTGG TGTCCCTACTGCAATCTGGAGCTGCGCGCCTACCAGGCGCTGCTGCCTGAGATCACGGCGCGTGGCGCGCGTCTGGTCGC GGTCTCGCCGGAGACGCCGGACAATACCCTGACCACGGCGGAGACGAACGCGCTTCTCTTCGAGGTGCTGTCGGACACCG AGGGACGTCTCGCCGATGCGCTTCGTATCCGCTACGAGCTGACGGCTCCGATCAAGGCGCTGTACCAGAAGTTCGGCCAC GACCTGCCGGTGCGCAATGGCGACGGCCGCTGGTCGCTGCCGATGCCCGCGACCTATGTCGTCGCCAAGGGCGGCCGCAT CCTGCTTGCGCATGTCAGCCCGGACTATCGCACGCGGCTGGAGCCGGAGGCCGCGCTGGCCGCGCTCACCTCGCCTGCAA CGGTCGCCGCCGCCTGA
Upstream 100 bases:
>100_bases GGATCGCATCTGACGATCCGATCTCTCCCCGCAGGCGGGGAGAGATCCACCACAAGCACGCTTCAATTCCGACGCCACAG CCCGACAAGGACCCGTCATC
Downstream 100 bases:
>100_bases TCAGGCTCAGAGGAGGCAGTCCCATGACACTCGACGGCAAGGTCGCCCTGGTTACCGGCGCCGGCAGCGGCATCGGCCGC GCCACGGCTCTCGCGCTCGC
Product: putative AhpC/Tsa family protein, selenocysteine-containing oxidoreductase
Products: NA
Alternate protein names: Redoxin; Peroxiredoxin; AhpC/Tsa Family Protein; Peroxiredoxin-Like Protein; Redoxin Superfamily; Antioxidant AhpC/TSA Family; Peroxiredoxin/AhpC/Tsa Family Protein; AhpC/Tsa Family Protein Selenocysteine-Containing; Peroxiredoxin Family Protein; Peroxiredoxin Thioredoxin-Like Fold Protein; AhpC-TSA; Alkyl Hydroperoxide Reductase; Helix-Turn-Helix Fis-Type; Antioxidant AhpC/TSA Family Protein
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MSLQSELDAFKSAWTSRVGDDIATLVDTDNAALQDLADRAVKEGAAFPAPTLRNHKGGVTDLGALMAESALIVTFYRGGW CPYCNLELRAYQALLPEITARGARLVAVSPETPDNTLTTAETNALLFEVLSDTEGRLADALRIRYELTAPIKALYQKFGH DLPVRNGDGRWSLPMPATYVVAKGGRILLAHVSPDYRTRLEPEAALAALTSPATVAAA
Sequences:
>Translated_218_residues MSLQSELDAFKSAWTSRVGDDIATLVDTDNAALQDLADRAVKEGAAFPAPTLRNHKGGVTDLGALMAESALIVTFYRGGW CPYCNLELRAYQALLPEITARGARLVAVSPETPDNTLTTAETNALLFEVLSDTEGRLADALRIRYELTAPIKALYQKFGH DLPVRNGDGRWSLPMPATYVVAKGGRILLAHVSPDYRTRLEPEAALAALTSPATVAAA >Mature_217_residues SLQSELDAFKSAWTSRVGDDIATLVDTDNAALQDLADRAVKEGAAFPAPTLRNHKGGVTDLGALMAESALIVTFYRGGWC PYCNLELRAYQALLPEITARGARLVAVSPETPDNTLTTAETNALLFEVLSDTEGRLADALRIRYELTAPIKALYQKFGHD LPVRNGDGRWSLPMPATYVVAKGGRILLAHVSPDYRTRLEPEAALAALTSPATVAAA
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23425; Mature: 23294
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLQSELDAFKSAWTSRVGDDIATLVDTDNAALQDLADRAVKEGAAFPAPTLRNHKGGVT CCHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH DLGALMAESALIVTFYRGGWCPYCNLELRAYQALLPEITARGARLVAVSPETPDNTLTTA HHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEC ETNALLFEVLSDTEGRLADALRIRYELTAPIKALYQKFGHDLPVRNGDGRWSLPMPATYV HHHHHHHHHHHCCCCHHHHHHHHEEEECHHHHHHHHHHCCCCCCCCCCCCEECCCCCEEE VAKGGRILLAHVSPDYRTRLEPEAALAALTSPATVAAA EECCCEEEEEECCCCHHHCCCHHHHHHHHCCCCCCCCC >Mature Secondary Structure SLQSELDAFKSAWTSRVGDDIATLVDTDNAALQDLADRAVKEGAAFPAPTLRNHKGGVT CHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH DLGALMAESALIVTFYRGGWCPYCNLELRAYQALLPEITARGARLVAVSPETPDNTLTTA HHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEC ETNALLFEVLSDTEGRLADALRIRYELTAPIKALYQKFGHDLPVRNGDGRWSLPMPATYV HHHHHHHHHHHCCCCHHHHHHHHEEEECHHHHHHHHHHCCCCCCCCCCCCEECCCCCEEE VAKGGRILLAHVSPDYRTRLEPEAALAALTSPATVAAA EECCCEEEEEECCCCHHHCCCHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA