Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

Click here to switch to the map view.

The map label for this gene is surA [H]

Identifier: 146340301

GI number: 146340301

Start: 3519554

End: 3520417

Strand: Reverse

Name: surA [H]

Synonym: BRADO3324

Alternate gene names: 146340301

Gene position: 3520417-3519554 (Counterclockwise)

Preceding gene: 146340302

Following gene: 146340300

Centisome position: 47.21

GC content: 61.81

Gene sequence:

>864_bases
ATGACATCGGCTCACGCCCAGAGCATCGTCGTCATGGTGAACGGCGATCCCATCACCGATTACGACATCGAGCAGCGCAG
CAAGCTGAATTTCCTGAGCACACACAAGCAGCAGAGCCGCCAGGAGGTTCTCAACGAACTGATCGACGACAAGGTGAAGA
TCAAGGAAGGCAAGAAGTTCGGCGTCGAGCCATCCTCATCCGACATCGACCAGTCCTTCGCCGGCATGGGCTCGCGCATG
CGCCTCAACGCCGAGCAGCTGACACGGTCGCTCGAGAGCCAGGGCGTGCGGCCGGAGACGCTCAAGCAGCGCATCAAGGC
CGAGATCGTCTGGACCAGCCTTGTGCGCGGCCGCTACAAGGAACGCCTGTTCGTCTCGGACAAGGACGTCGCTGCAGCGG
TCGCTGCCGCCGGCGGCGACACCGGTCAGCAGGGCCAATCCTTCGAATACAAGATGCAGCCTGTGGTTCTCATCGTGCCG
AATTCGTCGAACCAGGGCGCGATGGAAATCCGGCAGAAGGAGGCCGAGGCGCTGCGTGGACGGGTGCAGAGCTGCGCGGA
CGCCAACAACATCTCCAGGACGACGGCGAATGCCGTCGTCAAGGAGATCGTCGTCAAGACCTCCGCCGATATCCCGCCTA
ACCTGCGCAAGCTGCTCGACGACACCCCGATCGGTCACCTGACCCCGCCAGAAGCCACCAAGCAGGGGATTCAGATGGTC
GCGCTCTGCGCGCGTACACCCACCACGGTCGATACGCCGAAGGCGCGCGAGATCAAGGAACAGATGTACGCCAAGAAATA
TGAGGCGACGTCGAAGGCCTATCTGCAGGAAGTCCGCAAGGCGGCGATGATCGAATATCGCTGA

Upstream 100 bases:

>100_bases
TTATTGCGAACAGCGAAGCTCAGTCATGACGTCTCCGTTCCTTCCCCGCCTCTTGATCCTGCCCCTCTGCGCGGTCGCTG
CGCTGGCCTGGGGCGCTCCA

Downstream 100 bases:

>100_bases
TGACGATTCCCCTCGCGCTCACGCTGGGCGAGCCAGCAGGCATTGGACCGGACATCACCCTGCTGGCCTGGCTGCGTCGC
GCCGAGCTCGGTTTGCCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Peptidyl-prolyl cis-trans isomerase surA; PPIase surA; Rotamase surA [H]

Number of amino acids: Translated: 287; Mature: 286

Protein sequence:

>287_residues
MTSAHAQSIVVMVNGDPITDYDIEQRSKLNFLSTHKQQSRQEVLNELIDDKVKIKEGKKFGVEPSSSDIDQSFAGMGSRM
RLNAEQLTRSLESQGVRPETLKQRIKAEIVWTSLVRGRYKERLFVSDKDVAAAVAAAGGDTGQQGQSFEYKMQPVVLIVP
NSSNQGAMEIRQKEAEALRGRVQSCADANNISRTTANAVVKEIVVKTSADIPPNLRKLLDDTPIGHLTPPEATKQGIQMV
ALCARTPTTVDTPKAREIKEQMYAKKYEATSKAYLQEVRKAAMIEYR

Sequences:

>Translated_287_residues
MTSAHAQSIVVMVNGDPITDYDIEQRSKLNFLSTHKQQSRQEVLNELIDDKVKIKEGKKFGVEPSSSDIDQSFAGMGSRM
RLNAEQLTRSLESQGVRPETLKQRIKAEIVWTSLVRGRYKERLFVSDKDVAAAVAAAGGDTGQQGQSFEYKMQPVVLIVP
NSSNQGAMEIRQKEAEALRGRVQSCADANNISRTTANAVVKEIVVKTSADIPPNLRKLLDDTPIGHLTPPEATKQGIQMV
ALCARTPTTVDTPKAREIKEQMYAKKYEATSKAYLQEVRKAAMIEYR
>Mature_286_residues
TSAHAQSIVVMVNGDPITDYDIEQRSKLNFLSTHKQQSRQEVLNELIDDKVKIKEGKKFGVEPSSSDIDQSFAGMGSRMR
LNAEQLTRSLESQGVRPETLKQRIKAEIVWTSLVRGRYKERLFVSDKDVAAAVAAAGGDTGQQGQSFEYKMQPVVLIVPN
SSNQGAMEIRQKEAEALRGRVQSCADANNISRTTANAVVKEIVVKTSADIPPNLRKLLDDTPIGHLTPPEATKQGIQMVA
LCARTPTTVDTPKAREIKEQMYAKKYEATSKAYLQEVRKAAMIEYR

Specific function: Chaperone involved in the correct folding and assembly of outer membrane proteins. It recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act

COG id: COG0760

COG function: function code O; Parvulin-like peptidyl-prolyl isomerase

Gene ontology:

Cell location: Periplasm. Note=Is capable of associating with the outer membrane (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PpiC domains [H]

Homologues:

None

Paralogues:

None

Copy number: 400 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000297
- InterPro:   IPR023034
- InterPro:   IPR015391
- InterPro:   IPR008880 [H]

Pfam domain/function: PF00639 Rotamase; PF09312 SurA_N [H]

EC number: =5.2.1.8 [H]

Molecular weight: Translated: 31839; Mature: 31707

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSAHAQSIVVMVNGDPITDYDIEQRSKLNFLSTHKQQSRQEVLNELIDDKVKIKEGKKF
CCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCC
GVEPSSSDIDQSFAGMGSRMRLNAEQLTRSLESQGVRPETLKQRIKAEIVWTSLVRGRYK
CCCCCCCHHHHHHHCCCCCEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
ERLFVSDKDVAAAVAAAGGDTGQQGQSFEYKMQPVVLIVPNSSNQGAMEIRQKEAEALRG
HHEECCCCHHHHHHHHCCCCCCCCCCCCEEECCEEEEEEECCCCCCHHHHHHHHHHHHHH
RVQSCADANNISRTTANAVVKEIVVKTSADIPPNLRKLLDDTPIGHLTPPEATKQGIQMV
HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHH
ALCARTPTTVDTPKAREIKEQMYAKKYEATSKAYLQEVRKAAMIEYR
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TSAHAQSIVVMVNGDPITDYDIEQRSKLNFLSTHKQQSRQEVLNELIDDKVKIKEGKKF
CCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCC
GVEPSSSDIDQSFAGMGSRMRLNAEQLTRSLESQGVRPETLKQRIKAEIVWTSLVRGRYK
CCCCCCCHHHHHHHCCCCCEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
ERLFVSDKDVAAAVAAAGGDTGQQGQSFEYKMQPVVLIVPNSSNQGAMEIRQKEAEALRG
HHEECCCCHHHHHHHHCCCCCCCCCCCCEEECCEEEEEEECCCCCCHHHHHHHHHHHHHH
RVQSCADANNISRTTANAVVKEIVVKTSADIPPNLRKLLDDTPIGHLTPPEATKQGIQMV
HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHH
ALCARTPTTVDTPKAREIKEQMYAKKYEATSKAYLQEVRKAAMIEYR
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA