Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146300942

Identifier: 146300942

GI number: 146300942

Start: 3810614

End: 3811222

Strand: Reverse

Name: 146300942

Synonym: Fjoh_3197

Alternate gene names: NA

Gene position: 3811222-3810614 (Counterclockwise)

Preceding gene: 146300944

Following gene: 146300941

Centisome position: 62.51

GC content: 35.3

Gene sequence:

>609_bases
ATGAAAACTATAAAGCGTAAAAAAGAAACCGCCGTAATTTTGCCTTATGCGGTATCTAAAGAAGCAGTTGATTTTTGTAT
TGAAACTGCCGGACCTGCTCATACTTTATGGATAAACGAAATTTGTGAAGTAACATTACTGTCAGCCATAGCACGTGGTA
CAGGTATATCCGGACGTTCACCAGAACTTCTTAAGGAAAAAATGAAAAAGGGAGAAGCTGTTATTGCATTTACAGCAGAT
GGAAGATGGGCAGGTTTTTCATTTATTTCTTCTTGGGAAAACGGCCGTTATGTTTCAAATTCTGGTTTGATTGTTGCGCC
AGATTTCAGGCATACCGGATTAGCGAAAAAAATTAAAAGAAAGATTTTTGAACTTAGTATTCAAAAATATCCTAATGCTA
AAATATTCAGCCTTACAACTGGTCTTGCGGTAATGAAAATGAATCATGAACTGGGATTTGAACCTGTAACATATTCAGAA
CTGCCCGGTGACGAAGAATTTTGGGATAATTGCAAAACCTGTGTCAATTGTCCTATTTTAAAAAGTAAGGACAGAAAAAA
CTGTTTATGCACTGCAATGCTTTATGATCCAAAAAATATTCAAATATAA

Upstream 100 bases:

>100_bases
TATCGCTCTTTTGCTGATCTCACAAATAGTTTAGCTGTTTTGAGTTTAGCATTTGAATTTCGATAGAGTAGTATTACAAA
TAGAAATTTTCTAAACTGAT

Downstream 100 bases:

>100_bases
AACAGACTCCGTGTTTGCTGTAAAAATTAGTAACAAAATTGATTTTTGATGCGTATATTTGATATAGTAAAAAAAGGAAG
CATTTATGAAAAAGCTAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MKTIKRKKETAVILPYAVSKEAVDFCIETAGPAHTLWINEICEVTLLSAIARGTGISGRSPELLKEKMKKGEAVIAFTAD
GRWAGFSFISSWENGRYVSNSGLIVAPDFRHTGLAKKIKRKIFELSIQKYPNAKIFSLTTGLAVMKMNHELGFEPVTYSE
LPGDEEFWDNCKTCVNCPILKSKDRKNCLCTAMLYDPKNIQI

Sequences:

>Translated_202_residues
MKTIKRKKETAVILPYAVSKEAVDFCIETAGPAHTLWINEICEVTLLSAIARGTGISGRSPELLKEKMKKGEAVIAFTAD
GRWAGFSFISSWENGRYVSNSGLIVAPDFRHTGLAKKIKRKIFELSIQKYPNAKIFSLTTGLAVMKMNHELGFEPVTYSE
LPGDEEFWDNCKTCVNCPILKSKDRKNCLCTAMLYDPKNIQI
>Mature_202_residues
MKTIKRKKETAVILPYAVSKEAVDFCIETAGPAHTLWINEICEVTLLSAIARGTGISGRSPELLKEKMKKGEAVIAFTAD
GRWAGFSFISSWENGRYVSNSGLIVAPDFRHTGLAKKIKRKIFELSIQKYPNAKIFSLTTGLAVMKMNHELGFEPVTYSE
LPGDEEFWDNCKTCVNCPILKSKDRKNCLCTAMLYDPKNIQI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22585; Mature: 22585

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIKRKKETAVILPYAVSKEAVDFCIETAGPAHTLWINEICEVTLLSAIARGTGISGRS
CCCCCCCCCCEEEEEEHHCHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCC
PELLKEKMKKGEAVIAFTADGRWAGFSFISSWENGRYVSNSGLIVAPDFRHTGLAKKIKR
HHHHHHHHHCCCEEEEEECCCCEECHHHHHCCCCCCEECCCCEEEECCCCCCHHHHHHHH
KIFELSIQKYPNAKIFSLTTGLAVMKMNHELGFEPVTYSELPGDEEFWDNCKTCVNCPIL
HHHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
KSKDRKNCLCTAMLYDPKNIQI
CCCCCCCEEEEEEEECCCCCCC
>Mature Secondary Structure
MKTIKRKKETAVILPYAVSKEAVDFCIETAGPAHTLWINEICEVTLLSAIARGTGISGRS
CCCCCCCCCCEEEEEEHHCHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCC
PELLKEKMKKGEAVIAFTADGRWAGFSFISSWENGRYVSNSGLIVAPDFRHTGLAKKIKR
HHHHHHHHHCCCEEEEEECCCCEECHHHHHCCCCCCEECCCCEEEECCCCCCHHHHHHHH
KIFELSIQKYPNAKIFSLTTGLAVMKMNHELGFEPVTYSELPGDEEFWDNCKTCVNCPIL
HHHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
KSKDRKNCLCTAMLYDPKNIQI
CCCCCCCEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA