Definition Corynebacterium glutamicum R chromosome, complete genome.
Accession NC_009342
Length 3,314,179

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The map label for this gene is ygjT [C]

Identifier: 145295871

GI number: 145295871

Start: 1990821

End: 1991930

Strand: Reverse

Name: ygjT [C]

Synonym: cgR_1796

Alternate gene names: 145295871

Gene position: 1991930-1990821 (Counterclockwise)

Preceding gene: 145295872

Following gene: 145295869

Centisome position: 60.1

GC content: 53.06

Gene sequence:

>1110_bases
ATGGAAGTAAACTTAGCCACATGGCTGATCACCATCGCAGTGATTGCTGGCTTCTTCATCTTCGATTTCTATTCCCACGT
TCGCACCCCACACGAGCCGACCTTAAAAGAGTCCGCCTGGTGGAGCTTGTTCTATGTCGGTCTTGCCTGTGTCTTCGGCA
TCTTCTTATGGTTCGTTTGGGGCGAGCCTGGTAACCCGCACCAGCACGGCATCGAGTTCTTCACGGGTTACGTCACAGAG
AAGGCATTGAGCGTTGATAACCTGTTCATCTTCGCGCTGATCATGACTGCCTTTAAGATTCCGCGTAAGTACCAGCAAAA
GGTACTGCTCATTGGTATCGCACTGGCACTGATCTTCCGCCTTCTGTTCATCCTCCTCGGCGCTGCAGTTATCGAAGCAT
GGTCCGATGTCTTCTACATCTTCTCCATCTGGCTGATCTACACCGCTGTGAAGCTCCTGTGGGACGAAGTTCGAGACACC
CCTGAGACCGACCCAAACGATATGTTCATCATTAAGGCGCTGCGCAAGGTCATTCCGGTTACTGAGGGCTACCACGGCGA
CAAGCTCACTCATCGCGCCGGTGGAAAGCTGCACCTGACCCCACTGTTCGTTGCACTTGTATCCATCGGCATGGTTGACT
TGATGTTCGCACTGGACTCCATCCCAGCGATCTACGGCATCACCACCGAGCCTTACATCGTGTTCACCACTAACGCATTC
GCCCTGCTGGGTCTGCGCCAGATGTACTTCCTGCTTGACGGCCTGCTTGACCGCCTGGTCTACCTGCCTTATGGCCTGGG
TCTTATCCTGCTGTTCATTGGTGCGAAGCTTGGTCTGCACGCATTGCACGAAAACAATCTGCCATTCATCAACGGTGGCG
AAAACGTCTCCGTGCCTGAAGTTTCCACCGTATTCTCCTTGGTCTTCATCATTGGTGTCCTGACAATCACCGTCATTGCA
TCTGTCATTAAGAACAAGCGCGATGAAAACCAGGGCGGTATTCCACCCAAGTGGAACGCTGCAAAGTATGAGGGCGACAA
CTGGGAGACCGGTGAGGAGCCTGAAACGGGATCCGCCTCCGTTACCGATATCTCCTCAGAGAAGAAGTAA

Upstream 100 bases:

>100_bases
ATTTTGTTCTTAGATGCATGTTAGATGCGTTGAGGGACAAGGGTGGGGGAGACCTCCGGTTCTTAAATTATCTAACCAAG
AACCGGAGGTTCTTTTTCTC

Downstream 100 bases:

>100_bases
CAGCATTACTTAAAATAAAGGGCCAGCACCGAGGAGTTTCGTTGCTGGCCCTTTAGCCATACGACGCTGGTTTAGGCAAG
CGAGAAGGCGCCTGACTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MEVNLATWLITIAVIAGFFIFDFYSHVRTPHEPTLKESAWWSLFYVGLACVFGIFLWFVWGEPGNPHQHGIEFFTGYVTE
KALSVDNLFIFALIMTAFKIPRKYQQKVLLIGIALALIFRLLFILLGAAVIEAWSDVFYIFSIWLIYTAVKLLWDEVRDT
PETDPNDMFIIKALRKVIPVTEGYHGDKLTHRAGGKLHLTPLFVALVSIGMVDLMFALDSIPAIYGITTEPYIVFTTNAF
ALLGLRQMYFLLDGLLDRLVYLPYGLGLILLFIGAKLGLHALHENNLPFINGGENVSVPEVSTVFSLVFIIGVLTITVIA
SVIKNKRDENQGGIPPKWNAAKYEGDNWETGEEPETGSASVTDISSEKK

Sequences:

>Translated_369_residues
MEVNLATWLITIAVIAGFFIFDFYSHVRTPHEPTLKESAWWSLFYVGLACVFGIFLWFVWGEPGNPHQHGIEFFTGYVTE
KALSVDNLFIFALIMTAFKIPRKYQQKVLLIGIALALIFRLLFILLGAAVIEAWSDVFYIFSIWLIYTAVKLLWDEVRDT
PETDPNDMFIIKALRKVIPVTEGYHGDKLTHRAGGKLHLTPLFVALVSIGMVDLMFALDSIPAIYGITTEPYIVFTTNAF
ALLGLRQMYFLLDGLLDRLVYLPYGLGLILLFIGAKLGLHALHENNLPFINGGENVSVPEVSTVFSLVFIIGVLTITVIA
SVIKNKRDENQGGIPPKWNAAKYEGDNWETGEEPETGSASVTDISSEKK
>Mature_369_residues
MEVNLATWLITIAVIAGFFIFDFYSHVRTPHEPTLKESAWWSLFYVGLACVFGIFLWFVWGEPGNPHQHGIEFFTGYVTE
KALSVDNLFIFALIMTAFKIPRKYQQKVLLIGIALALIFRLLFILLGAAVIEAWSDVFYIFSIWLIYTAVKLLWDEVRDT
PETDPNDMFIIKALRKVIPVTEGYHGDKLTHRAGGKLHLTPLFVALVSIGMVDLMFALDSIPAIYGITTEPYIVFTTNAF
ALLGLRQMYFLLDGLLDRLVYLPYGLGLILLFIGAKLGLHALHENNLPFINGGENVSVPEVSTVFSLVFIIGVLTITVIA
SVIKNKRDENQGGIPPKWNAAKYEGDNWETGEEPETGSASVTDISSEKK

Specific function: Unknown

COG id: COG0861

COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the terC family [H]

Homologues:

Organism=Escherichia coli, GI48994922, Length=309, Percent_Identity=33.9805825242718, Blast_Score=177, Evalue=1e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005496
- InterPro:   IPR022369 [H]

Pfam domain/function: PF03741 TerC [H]

EC number: NA

Molecular weight: Translated: 41344; Mature: 41344

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVNLATWLITIAVIAGFFIFDFYSHVRTPHEPTLKESAWWSLFYVGLACVFGIFLWFVW
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
GEPGNPHQHGIEFFTGYVTEKALSVDNLFIFALIMTAFKIPRKYQQKVLLIGIALALIFR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
LLFILLGAAVIEAWSDVFYIFSIWLIYTAVKLLWDEVRDTPETDPNDMFIIKALRKVIPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC
TEGYHGDKLTHRAGGKLHLTPLFVALVSIGMVDLMFALDSIPAIYGITTEPYIVFTTNAF
CCCCCCCCCHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCEEEEECCHH
ALLGLRQMYFLLDGLLDRLVYLPYGLGLILLFIGAKLGLHALHENNLPFINGGENVSVPE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCH
VSTVFSLVFIIGVLTITVIASVIKNKRDENQGGIPPKWNAAKYEGDNWETGEEPETGSAS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VTDISSEKK
EECCCCCCC
>Mature Secondary Structure
MEVNLATWLITIAVIAGFFIFDFYSHVRTPHEPTLKESAWWSLFYVGLACVFGIFLWFVW
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
GEPGNPHQHGIEFFTGYVTEKALSVDNLFIFALIMTAFKIPRKYQQKVLLIGIALALIFR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
LLFILLGAAVIEAWSDVFYIFSIWLIYTAVKLLWDEVRDTPETDPNDMFIIKALRKVIPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC
TEGYHGDKLTHRAGGKLHLTPLFVALVSIGMVDLMFALDSIPAIYGITTEPYIVFTTNAF
CCCCCCCCCHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCEEEEECCHH
ALLGLRQMYFLLDGLLDRLVYLPYGLGLILLFIGAKLGLHALHENNLPFINGGENVSVPE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCH
VSTVFSLVFIIGVLTITVIASVIKNKRDENQGGIPPKWNAAKYEGDNWETGEEPETGSAS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VTDISSEKK
EECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]