Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13471114

Identifier: 13471114

GI number: 13471114

Start: 825393

End: 825683

Strand: Reverse

Name: 13471114

Synonym: msl0999

Alternate gene names: NA

Gene position: 825683-825393 (Counterclockwise)

Preceding gene: 13471115

Following gene: 13471113

Centisome position: 11.74

GC content: 59.45

Gene sequence:

>291_bases
GTGGTCATGCACGAGGCCGTCAAACGACCAAGCGACGTGAGCGAACTCAAAGGCATGATTGCCTCACGGACGATCACACT
TCCGGAGCAGCAGGAACAAGTTGCTCGGATGGCACTGGCGAAGCCAGACGTGATAGCTTTTGGCACCGTCGGCTCGATTG
CCGCCGAATGCTCCGTCTCGCCCTCTACGGTGGTGCGCGCCGCCACGGGCCTCGGTTTCGCCGATTTTCGAGACTTCAGG
CGTTTTTTTCGGCTGCACCTACGGAAGGCAACAAGCCTGAACGCTGGTTAG

Upstream 100 bases:

>100_bases
CGCGCGCAACGCTCTAAAAATTGCGCTTGCCTGCATCGAGTCCGTCTCGAAGAAGCAAGCCATTCCGCTGCGATAGAAGC
TTCTGGAGCTACAGAGGAGT

Downstream 100 bases:

>100_bases
CTCCAACGAATGCAGGGATGGATCGGTCAGCGTCAGTCGTGTAGCATTGAAATTATTGAGGAATTTTGTCCGAGAGCGCT
ACCAAATTGCGCATAATTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MVMHEAVKRPSDVSELKGMIASRTITLPEQQEQVARMALAKPDVIAFGTVGSIAAECSVSPSTVVRAATGLGFADFRDFR
RFFRLHLRKATSLNAG

Sequences:

>Translated_96_residues
MVMHEAVKRPSDVSELKGMIASRTITLPEQQEQVARMALAKPDVIAFGTVGSIAAECSVSPSTVVRAATGLGFADFRDFR
RFFRLHLRKATSLNAG
>Mature_96_residues
MVMHEAVKRPSDVSELKGMIASRTITLPEQQEQVARMALAKPDVIAFGTVGSIAAECSVSPSTVVRAATGLGFADFRDFR
RFFRLHLRKATSLNAG

Specific function: Unknown

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10421; Mature: 10421

Theoretical pI: Translated: 10.74; Mature: 10.74

Prosite motif: PS51071 HTH_RPIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMHEAVKRPSDVSELKGMIASRTITLPEQQEQVARMALAKPDVIAFGTVGSIAAECSVS
CCCCHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEECCHHHHHHHCCCC
PSTVVRAATGLGFADFRDFRRFFRLHLRKATSLNAG
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVMHEAVKRPSDVSELKGMIASRTITLPEQQEQVARMALAKPDVIAFGTVGSIAAECSVS
CCCCHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEECCHHHHHHHCCCC
PSTVVRAATGLGFADFRDFRRFFRLHLRKATSLNAG
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA