Definition Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
Accession NC_002162
Length 751,719

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Identifier: 13358163

GI number: 13358163

Start: 745536

End: 746753

Strand: Reverse

Name: Not Available

Synonym: UU598

Alternate gene names: 13358163

Gene position: 746753-745536 (Counterclockwise)

Preceding gene: 13358164

Following gene: 13358162

Centisome position: 99.34

GC content: 23.48

Gene sequence:

>1218_bases
ATGGTAAAAAATTTTTTTATAAAAGATCCTATTCATGGTTTAATTACGTTTGATGAACAATATGAATGAGCTTATGAATT
AATTAAAACAAAAGAGTTCTGGCGTTTAAATAATATAAAGCAATTAGGATCAAGTTGATCAATTTTCCCAAGTGCTACTC
ATACACGTTTTACTCATTGTATTGGTGTTTTCCAAGTTACAAGAAAACTTTTAGATTCATTAAAATTCATTAAATCTGAT
ACACACGATTTAATAAATAATAAAAAGATTGTTTGTGCTGCAGCCTTATTACATGATATTGGTCATGGTCCTTTTTCCCA
TACTTTTGAATATGCAACAAATTATAATCATGAAAAAATTGGTCAAATGATTATTACTAATCCTAAAAGTGAAATTAATA
AAATTTTAATTAAACATAATATCAATCCAGTTGATGTTGCTAATATAATTGATCATAAATCCAAAAAAATGTGAATGCAA
CAGGTTATTTCATCTCAAATTGATGCAGATCGTTTAGATTATTTGCCACGTGATTCTCATTTTACAGGAACCAAGTATGG
AAATATAGACTATGATAATATCTTTAAAAAGGCAATAGTTTTTAACGATCAATTATGTTTTTCAAAACACTCTTGAAACG
CTTTAGAAAACATTTTAATTTCTCGTTGGAGTATGTTTGAAAATGTTTATTTAAATAAAACACCAACAACCTATGATATT
TTAATGAAAAAGACTTTAGCAAGAGTGCATTTTTTATACCAAAAACAAAAAAAATATATATTCAAAAATTCACAATTATT
AACAATTTTAAAACCATGATTAGATAATGAATCTTGAGATATTACTACTGTTCAAAATTTAGATGATTATTCATTTACAG
CTTTAATGCGATCGTTTGCTAATGAACATGATTTTATTTTAAAAACTTTAGCAACAAATTGGTTACAAAATAAAGATTTT
GTAACTTTTGAATATGAATATGGTAAAGATAAATCAAAAGATCAAAAGATTATTCATAAAAAATATTTTTATGAAACTAT
TACTTCAAATAAACAAATTTATGATTTTAATGAACCGGTTTTTTTATATACAGAAAACAAAAATAATGATATTAAATTAT
TAAAACTTGAAGATAAGAGTTTAATAATTGCTGCTTTAAAATCAATTAAACAACCACGAATAAAAAAATGAATTTTTTAC
TATAAACCTTTAAAATAA

Upstream 100 bases:

>100_bases
CGCATGGTCCAGAATTAGCTAAAACAATTTGTTATTTAGGACGCGAAAAAGTATTAAAAAATTTAATAAATATTTTAAAA
ATTTTGGATTAATAATTATT

Downstream 100 bases:

>100_bases
ATACTAATATATTAAATACAAAAAAACTAAAATATAAGGAGTTTAATATGAGCCGTCAATTAGTTGATATTGCTTATAAT
GCAATAAAAAATAATAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MVKNFFIKDPIHGLITFDEQYEWAYELIKTKEFWRLNNIKQLGSSWSIFPSATHTRFTHCIGVFQVTRKLLDSLKFIKSD
THDLINNKKIVCAAALLHDIGHGPFSHTFEYATNYNHEKIGQMIITNPKSEINKILIKHNINPVDVANIIDHKSKKMWMQ
QVISSQIDADRLDYLPRDSHFTGTKYGNIDYDNIFKKAIVFNDQLCFSKHSWNALENILISRWSMFENVYLNKTPTTYDI
LMKKTLARVHFLYQKQKKYIFKNSQLLTILKPWLDNESWDITTVQNLDDYSFTALMRSFANEHDFILKTLATNWLQNKDF
VTFEYEYGKDKSKDQKIIHKKYFYETITSNKQIYDFNEPVFLYTENKNNDIKLLKLEDKSLIIAALKSIKQPRIKKWIFY
YKPLK

Sequences:

>Translated_405_residues
MVKNFFIKDPIHGLITFDEQYE*AYELIKTKEFWRLNNIKQLGSS*SIFPSATHTRFTHCIGVFQVTRKLLDSLKFIKSD
THDLINNKKIVCAAALLHDIGHGPFSHTFEYATNYNHEKIGQMIITNPKSEINKILIKHNINPVDVANIIDHKSKKM*MQ
QVISSQIDADRLDYLPRDSHFTGTKYGNIDYDNIFKKAIVFNDQLCFSKHS*NALENILISRWSMFENVYLNKTPTTYDI
LMKKTLARVHFLYQKQKKYIFKNSQLLTILKP*LDNES*DITTVQNLDDYSFTALMRSFANEHDFILKTLATNWLQNKDF
VTFEYEYGKDKSKDQKIIHKKYFYETITSNKQIYDFNEPVFLYTENKNNDIKLLKLEDKSLIIAALKSIKQPRIKK*IFY
YKPLK
>Mature_405_residues
MVKNFFIKDPIHGLITFDEQYE*AYELIKTKEFWRLNNIKQLGSS*SIFPSATHTRFTHCIGVFQVTRKLLDSLKFIKSD
THDLINNKKIVCAAALLHDIGHGPFSHTFEYATNYNHEKIGQMIITNPKSEINKILIKHNINPVDVANIIDHKSKKM*MQ
QVISSQIDADRLDYLPRDSHFTGTKYGNIDYDNIFKKAIVFNDQLCFSKHS*NALENILISRWSMFENVYLNKTPTTYDI
LMKKTLARVHFLYQKQKKYIFKNSQLLTILKP*LDNES*DITTVQNLDDYSFTALMRSFANEHDFILKTLATNWLQNKDF
VTFEYEYGKDKSKDQKIIHKKYFYETITSNKQIYDFNEPVFLYTENKNNDIKLLKLEDKSLIIAALKSIKQPRIKK*IFY
YKPLK

Specific function: Unknown

COG id: COG1078

COG function: function code R; HD superfamily phosphohydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain [H]

Homologues:

Organism=Homo sapiens, GI38016914, Length=277, Percent_Identity=28.158844765343, Blast_Score=83, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17537827, Length=126, Percent_Identity=35.7142857142857, Blast_Score=75, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17537829, Length=127, Percent_Identity=35.4330708661417, Blast_Score=75, Evalue=7e-14,
Organism=Drosophila melanogaster, GI24666702, Length=235, Percent_Identity=25.9574468085106, Blast_Score=71, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46712; Mature: 46712

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKNFFIKDPIHGLITFDEQYEAYELIKTKEFWRLNNIKQLGSSSIFPSATHTRFTHCIG
CCCCEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
VFQVTRKLLDSLKFIKSDTHDLINNKKIVCAAALLHDIGHGPFSHTFEYATNYNHEKIGQ
HHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHCC
MIITNPKSEINKILIKHNINPVDVANIIDHKSKKMMQQVISSQIDADRLDYLPRDSHFTG
EEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCC
TKYGNIDYDNIFKKAIVFNDQLCFSKHSNALENILISRWSMFENVYLNKTPTTYDILMKK
CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCHHHHHHHH
TLARVHFLYQKQKKYIFKNSQLLTILKPLDNESDITTVQNLDDYSFTALMRSFANEHDFI
HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHCCCCHHHHHHHHHHCCCHHHH
LKTLATNWLQNKDFVTFEYEYGKDKSKDQKIIHKKYFYETITSNKQIYDFNEPVFLYTEN
HHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEECC
KNNDIKLLKLEDKSLIIAALKSIKQPRIKKIFYYKPLK
CCCCEEEEEECCCHHHHHHHHHHCCCCHHEEEEECCCC
>Mature Secondary Structure
MVKNFFIKDPIHGLITFDEQYEAYELIKTKEFWRLNNIKQLGSSSIFPSATHTRFTHCIG
CCCCEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
VFQVTRKLLDSLKFIKSDTHDLINNKKIVCAAALLHDIGHGPFSHTFEYATNYNHEKIGQ
HHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHCC
MIITNPKSEINKILIKHNINPVDVANIIDHKSKKMMQQVISSQIDADRLDYLPRDSHFTG
EEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCC
TKYGNIDYDNIFKKAIVFNDQLCFSKHSNALENILISRWSMFENVYLNKTPTTYDILMKK
CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCHHHHHHHH
TLARVHFLYQKQKKYIFKNSQLLTILKPLDNESDITTVQNLDDYSFTALMRSFANEHDFI
HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHCCCCHHHHHHHHHHCCCHHHH
LKTLATNWLQNKDFVTFEYEYGKDKSKDQKIIHKKYFYETITSNKQIYDFNEPVFLYTEN
HHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEECC
KNNDIKLLKLEDKSLIIAALKSIKQPRIKKIFYYKPLK
CCCCEEEEEECCCHHHHHHHHHHCCCCHHEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377; 7934828 [H]