Definition | Clostridium difficile 630 chromosome, complete genome. |
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Accession | NC_009089 |
Length | 4,290,252 |
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The map label for this gene is 126698564
Identifier: 126698564
GI number: 126698564
Start: 1143302
End: 1143688
Strand: Direct
Name: 126698564
Synonym: CD0979
Alternate gene names: NA
Gene position: 1143302-1143688 (Clockwise)
Preceding gene: 126698563
Following gene: 126698565
Centisome position: 26.65
GC content: 25.06
Gene sequence:
>387_bases ATGCTAAATAAAAAATTACCAGATTCAGAGTTCAAGATTATGAAATACATATGGAATACTGGTTATAAAACTGTAATATC AAAAGATGTGGCAGATGAAATGGAAAAAATATATAAATGGAAACAAACTACAACACTAACACTTTTATTAAGGTTAACTA AAAGAGGTTTTTTAGCTTCTCAAAAAATAGGTAAACACACACATTATACAATATTAATAAAAGAAAAAGAATACTTAAAA TCAGAAACTAAAAAACTATTTGGAGGTTTACATAATAATCCTTTATCACAGTTAATATCAAAATTACATGATAAAGAAGA GGTAAGTATTGATAAAATAGATGCGCTTGAAAAATGGTTAAGAAGTTTGCAAGAAGATGAAGAATAA
Upstream 100 bases:
>100_bases AAAGACAGAGAAACAAATAAAAGTATTTATAGAAAGTATGCAGAAACTAGGAAAAAAATAATTTTATATTTTTATATGTT AATAGAAAGAAGGGGATATT
Downstream 100 bases:
>100_bases GAATATGCCAAAAGGTAGCACTCAATAGTAGCTACCTTTTTGTGGATAAAGCTGGGGATAAACTGTGGAAAAGTTATATA AAAATTGTGGATAAAATGTT
Product: phage regulatory protein
Products: NA
Alternate protein names: Beta-Lactamase Repressor; Transcriptional Repressor CopY Family; Phage Regulatory Protein; Transcriptional Repressor
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MLNKKLPDSEFKIMKYIWNTGYKTVISKDVADEMEKIYKWKQTTTLTLLLRLTKRGFLASQKIGKHTHYTILIKEKEYLK SETKKLFGGLHNNPLSQLISKLHDKEEVSIDKIDALEKWLRSLQEDEE
Sequences:
>Translated_128_residues MLNKKLPDSEFKIMKYIWNTGYKTVISKDVADEMEKIYKWKQTTTLTLLLRLTKRGFLASQKIGKHTHYTILIKEKEYLK SETKKLFGGLHNNPLSQLISKLHDKEEVSIDKIDALEKWLRSLQEDEE >Mature_128_residues MLNKKLPDSEFKIMKYIWNTGYKTVISKDVADEMEKIYKWKQTTTLTLLLRLTKRGFLASQKIGKHTHYTILIKEKEYLK SETKKLFGGLHNNPLSQLISKLHDKEEVSIDKIDALEKWLRSLQEDEE
Specific function: Unknown
COG id: COG3682
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15127; Mature: 15127
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNKKLPDSEFKIMKYIWNTGYKTVISKDVADEMEKIYKWKQTTTLTLLLRLTKRGFLAS CCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QKIGKHTHYTILIKEKEYLKSETKKLFGGLHNNPLSQLISKLHDKEEVSIDKIDALEKWL HHHCCCCEEEEEEECHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHCCCHHHHHHHHHHH RSLQEDEE HHHHCCCC >Mature Secondary Structure MLNKKLPDSEFKIMKYIWNTGYKTVISKDVADEMEKIYKWKQTTTLTLLLRLTKRGFLAS CCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QKIGKHTHYTILIKEKEYLKSETKKLFGGLHNNPLSQLISKLHDKEEVSIDKIDALEKWL HHHCCCCEEEEEEECHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHCCCHHHHHHHHHHH RSLQEDEE HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA