Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
---|---|
Accession | NC_008825 |
Length | 4,044,195 |
Click here to switch to the map view.
The map label for this gene is artQ [H]
Identifier: 124265325
GI number: 124265325
Start: 136099
End: 136851
Strand: Direct
Name: artQ [H]
Synonym: Mpe_A0132
Alternate gene names: 124265325
Gene position: 136099-136851 (Clockwise)
Preceding gene: 124265324
Following gene: 124265328
Centisome position: 3.37
GC content: 69.46
Gene sequence:
>753_bases ATGGACTTTCGCTGGGAGATCCTGGCCGGCTACGGACCGCTGTTCCTGGCCGGCGTCCTGATGACGATCAAGCTGACGAT CGTCGCGATCGTCGCCGGTCTCGCGCTCGGGCTGGTGCTGGGCCTGATCAGCAGCACGCGCTATGCGCCCAAGCCGAGGT CGCCGCTGGGGGCGGCGCTGCTGAAGCCGGCGCAGTGGCTGACCATCGCCTACGTCACCTTCTTCCGCGGCACGCCGCTG TTCGTGCAGATCCTGCTGGTGCACTTCGCGCTGATGCCGGCGCTGATCCACCCGGACAACGGCCTGCTGCTCACCGGCGA GGCCGCGCGTGAGTTCCGCCAGAACTACGGCGCCTTCTTCTCCGGCGCGCTGGCGCTCACGCTGAACGCCGGCGCCTACA TCTCCGAGATCTTCCGCGCCGGCATCCAGAGCATCCACGGCGGCCAGACGCAGGCGGCCTACAGCCTGGGCCTCACGCAC GTGCAGAGCATGCGCCACGTGATCCTGCCGCAGGCCGTGCGCCGCATGGTGCCGCCGCTGGTCAACGAGGCGGTCACGCT GATCAAGGATTCGTCGCTGGTGTCGGCGATCGGCCTGGCCGAGCTGGCGCTGGCCGCGCGCACCGTGGCCGGGGCCTACT CGCGCTACTGGGAACCCTACCTCGCGATCTCGGCGGTCTACCTGCTGCTCACTTGGCTGCTGTCCACGCTGGCCAAGCGG CTCGAATCGCCCGACCACCTGCGCGGGCGCTAG
Upstream 100 bases:
>100_bases CGGCAGCTACGACCAGGTCTACGCCAAGACCTTCGGTGCAGCCGCTCCCGCGGCGGCGGCTTCCAAGTAAGCAGCGGCTT CAGGACCCCGAGGATCTCCC
Downstream 100 bases:
>100_bases ATCGCCAGCGGGTCCACGTCGACGGCCCAGCGCAACAGCCCCTTCTGCTCCGGCCGCTTGCGCCGCAGCGTGGCGTCCCA GGCCGTGAGAAAGCGCTGCA
Product: amino acid ABC transporter
Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MDFRWEILAGYGPLFLAGVLMTIKLTIVAIVAGLALGLVLGLISSTRYAPKPRSPLGAALLKPAQWLTIAYVTFFRGTPL FVQILLVHFALMPALIHPDNGLLLTGEAAREFRQNYGAFFSGALALTLNAGAYISEIFRAGIQSIHGGQTQAAYSLGLTH VQSMRHVILPQAVRRMVPPLVNEAVTLIKDSSLVSAIGLAELALAARTVAGAYSRYWEPYLAISAVYLLLTWLLSTLAKR LESPDHLRGR
Sequences:
>Translated_250_residues MDFRWEILAGYGPLFLAGVLMTIKLTIVAIVAGLALGLVLGLISSTRYAPKPRSPLGAALLKPAQWLTIAYVTFFRGTPL FVQILLVHFALMPALIHPDNGLLLTGEAAREFRQNYGAFFSGALALTLNAGAYISEIFRAGIQSIHGGQTQAAYSLGLTH VQSMRHVILPQAVRRMVPPLVNEAVTLIKDSSLVSAIGLAELALAARTVAGAYSRYWEPYLAISAVYLLLTWLLSTLAKR LESPDHLRGR >Mature_250_residues MDFRWEILAGYGPLFLAGVLMTIKLTIVAIVAGLALGLVLGLISSTRYAPKPRSPLGAALLKPAQWLTIAYVTFFRGTPL FVQILLVHFALMPALIHPDNGLLLTGEAAREFRQNYGAFFSGALALTLNAGAYISEIFRAGIQSIHGGQTQAAYSLGLTH VQSMRHVILPQAVRRMVPPLVNEAVTLIKDSSLVSAIGLAELALAARTVAGAYSRYWEPYLAISAVYLLLTWLLSTLAKR LESPDHLRGR
Specific function: Part of a binding-protein-dependent transport system for arginine. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787030, Length=242, Percent_Identity=31.8181818181818, Blast_Score=121, Evalue=6e-29, Organism=Escherichia coli, GI1788226, Length=238, Percent_Identity=34.0336134453782, Blast_Score=120, Evalue=8e-29, Organism=Escherichia coli, GI1786873, Length=208, Percent_Identity=35.5769230769231, Blast_Score=119, Evalue=2e-28, Organism=Escherichia coli, GI1786874, Length=262, Percent_Identity=30.1526717557252, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1787087, Length=231, Percent_Identity=27.2727272727273, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1788645, Length=238, Percent_Identity=31.0924369747899, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI48994930, Length=117, Percent_Identity=40.1709401709402, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1788646, Length=228, Percent_Identity=27.1929824561404, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1787086, Length=200, Percent_Identity=28, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI87082239, Length=180, Percent_Identity=29.4444444444444, Blast_Score=72, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 27108; Mature: 27108
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFRWEILAGYGPLFLAGVLMTIKLTIVAIVAGLALGLVLGLISSTRYAPKPRSPLGAAL CCCEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH LKPAQWLTIAYVTFFRGTPLFVQILLVHFALMPALIHPDNGLLLTGEAAREFRQNYGAFF HCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHH SGALALTLNAGAYISEIFRAGIQSIHGGQTQAAYSLGLTHVQSMRHVILPQAVRRMVPPL HHHHHEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH VNEAVTLIKDSSLVSAIGLAELALAARTVAGAYSRYWEPYLAISAVYLLLTWLLSTLAKR HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LESPDHLRGR CCCCCCCCCC >Mature Secondary Structure MDFRWEILAGYGPLFLAGVLMTIKLTIVAIVAGLALGLVLGLISSTRYAPKPRSPLGAAL CCCEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH LKPAQWLTIAYVTFFRGTPLFVQILLVHFALMPALIHPDNGLLLTGEAAREFRQNYGAFF HCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHH SGALALTLNAGAYISEIFRAGIQSIHGGQTQAAYSLGLTHVQSMRHVILPQAVRRMVPPL HHHHHEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH VNEAVTLIKDSSLVSAIGLAELALAARTVAGAYSRYWEPYLAISAVYLLLTWLLSTLAKR HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LESPDHLRGR CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamine [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]