Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

Click here to switch to the map view.

The map label for this gene is 124025574

Identifier: 124025574

GI number: 124025574

Start: 801144

End: 802583

Strand: Direct

Name: 124025574

Synonym: NATL1_08671

Alternate gene names: NA

Gene position: 801144-802583 (Clockwise)

Preceding gene: 124025564

Following gene: 124025579

Centisome position: 42.96

GC content: 26.81

Gene sequence:

>1440_bases
ATGAGTTATCAAATTAATTTAAGAATCCATGGTCATAGTTGTTTGGAACTGAGAACTACAACAGACATAATATTATTTGA
TCCTTGGCTGAAAGGCTCAGCATACTGGAGATCGTGGTGGAATTTCCCAGAACAAAAAAATATAGAAGAATTAATTAGTG
AAATATCAAATGTAGAAAATATTTATGTATATATTACTCATCTTCATTGGGATCACTTTCATGGACCTAGCTTGAGAATA
CTTTACAGAGAAATTCCCAAGATCAAATTTCTGATACCAAAAGTGCCCGAAACAAGATTAAAAAATGATTTATTAAAAAT
TTTGGGTAACAAGATTAATATCATTGAAATTAATCATGGACAACTATATATCGTTTCCCCTAATATAAAAATTCAACCAT
TTTTAGCCGGACCAATACTTACAGATTCAGCTGTATTAATAAATTGTGATAATAATTATATTTTGAATTTAAATGACAGT
AAGCAGCAAAAATTAATGATTAATCAAATTAAATCTAATTTTAGGGAAGGTAAATTAAAAGTAATGCTTAGAAGCCATGC
TTCAGCAAACTCACGAGTATGCCAAAGGAATCGTGACGGAGGAGTTAAATTAAAAGCTGATAAAAAGATAGAAGAATATT
CTAAAGAATTTTTATTAACGGCAAGGATTTTTAAGCCTGAGGTTGCTATTCCATTTGCATCAAATATGTGTTATTTACAT
AAGGATACATATAAATATAATTTCTATTCTAATACTTCGGATAAGTTATTAAAATTCTACAGAGAGAACATTGAATACAG
TGACATAAATCTTAAACTAATTCTTCCTGGTGAGAAATTAAACGTTAATGATTTAAAAATTTCAGAGAATAAAACTTCAA
GAAATCAATTGTTTTCAGATAGGTATCAAGTTTTAAAATCCTATAGAGAAAAATATAAAAAGAAGATAGAAAGATCAGAG
TTTATTCAAGGAAAGGGATCTTTTTCTGAGATAATTTTCAAGAAATATTTCTATAATGTATTTAAATATACTCCATTTAT
AATAAGTAAACTTGTTCATGGTAAGGTGGCATTTATTGAAAAGAAAGATCATATTTATAATAAATTTTTTATTGTTGATA
TGCGGCGAAAGAAGATATTTTTAAATGCAATTAGTTATGATGATTGTGAAACTTTAATAATAGTTCGCCCTGGAGTATTA
AATAGTTGTCTAATGCAAAATAACCTTAATTCTTTAGGAATATCTAAATTATTAGAAGTTAGATCATCTTCAATCCGTCA
ATATAATTTGTTTTTCGCGATATGTGTTGCATCTGAAATAGGTTCTTATCCATTTATCTCGATCAAACAGAGTATAAGAA
GTTTTAAAATATGGATTAGAAGATTTAGAGAGATAATTGATTATATTCTTATTATTTTAAGGTTTAATAAGTTAATATAA

Upstream 100 bases:

>100_bases
TGATAATTAAAAAATAAGTGTTGTTGAAATATCAGTAATACAAAATCAATTTTTACTTCCCGAAATTATATAATGACACT
ATTATTCTAGTAAAGTAGAG

Downstream 100 bases:

>100_bases
ACAAATCTATTCTAAATTTATTCTTTTCTTTTAGCAGGTGGAATTAGTTTTTATTTTATTATATATATATTTTTTCTTCC
ACCTCTACTTAGTTCGAATT

Product: hypothetical protein

Products: NA

Alternate protein names: Zn-Dependent Hydrolase Of Beta-Lactamase Fold

Number of amino acids: Translated: 479; Mature: 478

Protein sequence:

>479_residues
MSYQINLRIHGHSCLELRTTTDIILFDPWLKGSAYWRSWWNFPEQKNIEELISEISNVENIYVYITHLHWDHFHGPSLRI
LYREIPKIKFLIPKVPETRLKNDLLKILGNKINIIEINHGQLYIVSPNIKIQPFLAGPILTDSAVLINCDNNYILNLNDS
KQQKLMINQIKSNFREGKLKVMLRSHASANSRVCQRNRDGGVKLKADKKIEEYSKEFLLTARIFKPEVAIPFASNMCYLH
KDTYKYNFYSNTSDKLLKFYRENIEYSDINLKLILPGEKLNVNDLKISENKTSRNQLFSDRYQVLKSYREKYKKKIERSE
FIQGKGSFSEIIFKKYFYNVFKYTPFIISKLVHGKVAFIEKKDHIYNKFFIVDMRRKKIFLNAISYDDCETLIIVRPGVL
NSCLMQNNLNSLGISKLLEVRSSSIRQYNLFFAICVASEIGSYPFISIKQSIRSFKIWIRRFREIIDYILIILRFNKLI

Sequences:

>Translated_479_residues
MSYQINLRIHGHSCLELRTTTDIILFDPWLKGSAYWRSWWNFPEQKNIEELISEISNVENIYVYITHLHWDHFHGPSLRI
LYREIPKIKFLIPKVPETRLKNDLLKILGNKINIIEINHGQLYIVSPNIKIQPFLAGPILTDSAVLINCDNNYILNLNDS
KQQKLMINQIKSNFREGKLKVMLRSHASANSRVCQRNRDGGVKLKADKKIEEYSKEFLLTARIFKPEVAIPFASNMCYLH
KDTYKYNFYSNTSDKLLKFYRENIEYSDINLKLILPGEKLNVNDLKISENKTSRNQLFSDRYQVLKSYREKYKKKIERSE
FIQGKGSFSEIIFKKYFYNVFKYTPFIISKLVHGKVAFIEKKDHIYNKFFIVDMRRKKIFLNAISYDDCETLIIVRPGVL
NSCLMQNNLNSLGISKLLEVRSSSIRQYNLFFAICVASEIGSYPFISIKQSIRSFKIWIRRFREIIDYILIILRFNKLI
>Mature_478_residues
SYQINLRIHGHSCLELRTTTDIILFDPWLKGSAYWRSWWNFPEQKNIEELISEISNVENIYVYITHLHWDHFHGPSLRIL
YREIPKIKFLIPKVPETRLKNDLLKILGNKINIIEINHGQLYIVSPNIKIQPFLAGPILTDSAVLINCDNNYILNLNDSK
QQKLMINQIKSNFREGKLKVMLRSHASANSRVCQRNRDGGVKLKADKKIEEYSKEFLLTARIFKPEVAIPFASNMCYLHK
DTYKYNFYSNTSDKLLKFYRENIEYSDINLKLILPGEKLNVNDLKISENKTSRNQLFSDRYQVLKSYREKYKKKIERSEF
IQGKGSFSEIIFKKYFYNVFKYTPFIISKLVHGKVAFIEKKDHIYNKFFIVDMRRKKIFLNAISYDDCETLIIVRPGVLN
SCLMQNNLNSLGISKLLEVRSSSIRQYNLFFAICVASEIGSYPFISIKQSIRSFKIWIRRFREIIDYILIILRFNKLI

Specific function: Unknown

COG id: COG2220

COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56646; Mature: 56515

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYQINLRIHGHSCLELRTTTDIILFDPWLKGSAYWRSWWNFPEQKNIEELISEISNVEN
CCEEEEEEECCCCEEEEEECCEEEEECCCCCCCHHHHHHCCCCCCCCHHHHHHHHCCCCE
IYVYITHLHWDHFHGPSLRILYREIPKIKFLIPKVPETRLKNDLLKILGNKINIIEINHG
EEEEEEEEEECCCCCCCEEEHHHHCCCEEEECCCCCHHHHHHHHHHHHCCCEEEEEEECC
QLYIVSPNIKIQPFLAGPILTDSAVLINCDNNYILNLNDSKQQKLMINQIKSNFREGKLK
EEEEECCCEEEEEEEECCEECCCEEEEECCCCEEEEECCCHHHHHHHHHHHHHHCCCEEE
VMLRSHASANSRVCQRNRDGGVKLKADKKIEEYSKEFLLTARIFKPEVAIPFASNMCYLH
EEEECCCCCCHHHHHCCCCCCEEEEECCHHHHHHHHHEEEEEECCCCEECEECCCEEEEE
KDTYKYNFYSNTSDKLLKFYRENIEYSDINLKLILPGEKLNVNDLKISENKTSRNQLFSD
CCCEEEEEECCCHHHHHHHHHHCCCEECEEEEEEECCCCCCCCCEEECCCCCHHHHHHHH
RYQVLKSYREKYKKKIERSEFIQGKGSFSEIIFKKYFYNVFKYTPFIISKLVHGKVAFIE
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE
KKDHIYNKFFIVDMRRKKIFLNAISYDDCETLIIVRPGVLNSCLMQNNLNSLGISKLLEV
CCCCCEEEEEEEEEECCEEEEEEECCCCCCEEEEECCCHHHHHHHHCCCCHHHHHHHHHH
RSSSIRQYNLFFAICVASEIGSYPFISIKQSIRSFKIWIRRFREIIDYILIILRFNKLI
HHHCCCEEHHHEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SYQINLRIHGHSCLELRTTTDIILFDPWLKGSAYWRSWWNFPEQKNIEELISEISNVEN
CEEEEEEECCCCEEEEEECCEEEEECCCCCCCHHHHHHCCCCCCCCHHHHHHHHCCCCE
IYVYITHLHWDHFHGPSLRILYREIPKIKFLIPKVPETRLKNDLLKILGNKINIIEINHG
EEEEEEEEEECCCCCCCEEEHHHHCCCEEEECCCCCHHHHHHHHHHHHCCCEEEEEEECC
QLYIVSPNIKIQPFLAGPILTDSAVLINCDNNYILNLNDSKQQKLMINQIKSNFREGKLK
EEEEECCCEEEEEEEECCEECCCEEEEECCCCEEEEECCCHHHHHHHHHHHHHHCCCEEE
VMLRSHASANSRVCQRNRDGGVKLKADKKIEEYSKEFLLTARIFKPEVAIPFASNMCYLH
EEEECCCCCCHHHHHCCCCCCEEEEECCHHHHHHHHHEEEEEECCCCEECEECCCEEEEE
KDTYKYNFYSNTSDKLLKFYRENIEYSDINLKLILPGEKLNVNDLKISENKTSRNQLFSD
CCCEEEEEECCCHHHHHHHHHHCCCEECEEEEEEECCCCCCCCCEEECCCCCHHHHHHHH
RYQVLKSYREKYKKKIERSEFIQGKGSFSEIIFKKYFYNVFKYTPFIISKLVHGKVAFIE
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE
KKDHIYNKFFIVDMRRKKIFLNAISYDDCETLIIVRPGVLNSCLMQNNLNSLGISKLLEV
CCCCCEEEEEEEEEECCEEEEEEECCCCCCEEEEECCCHHHHHHHHCCCCHHHHHHHHHH
RSSSIRQYNLFFAICVASEIGSYPFISIKQSIRSFKIWIRRFREIIDYILIILRFNKLI
HHHCCCEEHHHEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA