Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

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The map label for this gene is 123968703

Identifier: 123968703

GI number: 123968703

Start: 983774

End: 985357

Strand: Reverse

Name: 123968703

Synonym: A9601_11701

Alternate gene names: NA

Gene position: 985357-983774 (Counterclockwise)

Preceding gene: 123968706

Following gene: 123968700

Centisome position: 59.01

GC content: 34.28

Gene sequence:

>1584_bases
ATGAATGGGCAATACTCCCCAAAAAATGTTTTAGGTCAGTTAGCGATAGTTTTACATGCTCATCTACCTTATGTCAGAAA
AAATGAAAAGAATTCCTTAGAAGAGGATTGGTTATTTCAGGCAATTTTGGAATGTTATGTACCACTACTTCAATCAATAG
AATCTTCCAAAAAAGAAAATCCTGAAAATACAAAACTTACTATTAGTTTGTCTCCAACTTTATTATCACTTCTAAATAAT
AAACAAATTCAAGAAACTTTCCCAAGCTGGATTAAAACAAGGAATGATTTCTTAAACGAACTACCAATAGAAGAAAAAAA
TGCCTCTGCATTTTTAATTAAGAATCTCAATGAAAAATACTCATATTGGCAAAATTGTTCTGGAAATTTAATTGAGAAGT
TTAGGGTCTTAAATAACTCTGGAAATTTGGATATTCTTACTTGTGCGGCTACTCATGGATATTTGCCGATTCTAAGGGAG
AATCCTGAAACTGTTAAAGGCCAAATTAATACTGCAATAAGGAGCCATAAAAATATTTTTGGAACAAAGCCTTTAGGTAT
TTGGTTACCTGAATGCGCTTATTATGAGAATTTAGACGAAATACTAATTAATTCCGGAATAAGATATGCAATCTTAGACG
GTCATGGGATTCTTAATGCGACACCAAGGCCTAGGTATGGGGTGTACGCCCCAATCTGCTCGAGAAAAGGAGTTGCCTTC
TTCGGAAGAGATAGTGAGTCAACATTGCCCGTTTGGTCTGCTAAGGATGGATTCCCGGGAGATAAAGTTTATAGAGAATT
TCATAAAGATTTGGGATGGGAATTGCCTATCTCTAAACTCCAAAAGAAAGGTATTTCAACTAAAAGACCTTTGGGTTTGA
AGTTTCATAAGATTACAGATGATAAGGTACCCCTAGGGGAAAAGGCGTTTTACTTAGAAAATGAAGCCAAAAAGAAGGCT
GCAGAACATGCTGATGATTATCTTCTCGCGAGATCCAAACAATTAGAAAAATTAATATTATCCTCTTCCTTCAAGCCCTT
ATTGGTAGCTCCATTTGATGCAGAGTTATTTGGTCATTGGTGGTATGAAGGGCCTTTTTTTATTGAAAATATTTTAAAGA
ACTCTAGTAAATATTCAATTAAGCTTACAAATTTAAAAGAATTTTTACTTCAAAAGCCAAAACTTCAGATTTGCGATCCA
TCACCATCAAGCTGGGGACAAGGAGGTTACCACAACTACTGGATTAATGATGCAAATGCATGGATTGTCCCAGAGATCAC
AAAAGCAGGCTCAACTTTTGTTGATTTATGCTCGAAAAATTTCAATAATGACTTGTCCACAAGACTTTTCAAGCAAGCAG
CAAGAGAATTACTTCTCTCTGAGTCTTCTGATTGGAGTTTTATCCTAAGAGCTGGAACTACAACTGAGCTTGCAAAAGAG
AGGATAGAAAGACACTTGTTTAGATTCTGGAAAATAGTTGAAATGATTAAAAATCATTCCAATATTAATTTAAAATTTCT
TGAAGATATCGAGGAAGAAGATAAAGTTTTTCCAGATATTAATATTGATGATTGGCGAAAATAA

Upstream 100 bases:

>100_bases
AATACTTAAATTATTCAAGTATTCTTTTATGATTAAAGCTTCCTTTTATAAAAGGTTATTTTGATTTTTTATAGAATTAA
AGGCATAAATTATAAAAAAT

Downstream 100 bases:

>100_bases
AAAAATACTAATTTAATTTAAGCATTCCTAGTTTTACCTTTAGAGGTGAATTTATAAACATTTTACTCATCACATAAATA
AGTTTTGGAAGAGGAAGTGT

Product: hypothetical protein

Products: NA

Alternate protein names: Glycoside Hydrolase Family; Glycosyl Hydrolase Family; Glycosy Hydrolase Family Protein; Alpha-Amylase; (1-_4)-Alpha-D-Glucan Branching; Family; Glycogen Branching; Glycosyl Transferase/Glycoside Hydrolase-Like Protein; Glycosyl Hydrolase Family Protein

Number of amino acids: Translated: 527; Mature: 527

Protein sequence:

>527_residues
MNGQYSPKNVLGQLAIVLHAHLPYVRKNEKNSLEEDWLFQAILECYVPLLQSIESSKKENPENTKLTISLSPTLLSLLNN
KQIQETFPSWIKTRNDFLNELPIEEKNASAFLIKNLNEKYSYWQNCSGNLIEKFRVLNNSGNLDILTCAATHGYLPILRE
NPETVKGQINTAIRSHKNIFGTKPLGIWLPECAYYENLDEILINSGIRYAILDGHGILNATPRPRYGVYAPICSRKGVAF
FGRDSESTLPVWSAKDGFPGDKVYREFHKDLGWELPISKLQKKGISTKRPLGLKFHKITDDKVPLGEKAFYLENEAKKKA
AEHADDYLLARSKQLEKLILSSSFKPLLVAPFDAELFGHWWYEGPFFIENILKNSSKYSIKLTNLKEFLLQKPKLQICDP
SPSSWGQGGYHNYWINDANAWIVPEITKAGSTFVDLCSKNFNNDLSTRLFKQAARELLLSESSDWSFILRAGTTTELAKE
RIERHLFRFWKIVEMIKNHSNINLKFLEDIEEEDKVFPDINIDDWRK

Sequences:

>Translated_527_residues
MNGQYSPKNVLGQLAIVLHAHLPYVRKNEKNSLEEDWLFQAILECYVPLLQSIESSKKENPENTKLTISLSPTLLSLLNN
KQIQETFPSWIKTRNDFLNELPIEEKNASAFLIKNLNEKYSYWQNCSGNLIEKFRVLNNSGNLDILTCAATHGYLPILRE
NPETVKGQINTAIRSHKNIFGTKPLGIWLPECAYYENLDEILINSGIRYAILDGHGILNATPRPRYGVYAPICSRKGVAF
FGRDSESTLPVWSAKDGFPGDKVYREFHKDLGWELPISKLQKKGISTKRPLGLKFHKITDDKVPLGEKAFYLENEAKKKA
AEHADDYLLARSKQLEKLILSSSFKPLLVAPFDAELFGHWWYEGPFFIENILKNSSKYSIKLTNLKEFLLQKPKLQICDP
SPSSWGQGGYHNYWINDANAWIVPEITKAGSTFVDLCSKNFNNDLSTRLFKQAARELLLSESSDWSFILRAGTTTELAKE
RIERHLFRFWKIVEMIKNHSNINLKFLEDIEEEDKVFPDINIDDWRK
>Mature_527_residues
MNGQYSPKNVLGQLAIVLHAHLPYVRKNEKNSLEEDWLFQAILECYVPLLQSIESSKKENPENTKLTISLSPTLLSLLNN
KQIQETFPSWIKTRNDFLNELPIEEKNASAFLIKNLNEKYSYWQNCSGNLIEKFRVLNNSGNLDILTCAATHGYLPILRE
NPETVKGQINTAIRSHKNIFGTKPLGIWLPECAYYENLDEILINSGIRYAILDGHGILNATPRPRYGVYAPICSRKGVAF
FGRDSESTLPVWSAKDGFPGDKVYREFHKDLGWELPISKLQKKGISTKRPLGLKFHKITDDKVPLGEKAFYLENEAKKKA
AEHADDYLLARSKQLEKLILSSSFKPLLVAPFDAELFGHWWYEGPFFIENILKNSSKYSIKLTNLKEFLLQKPKLQICDP
SPSSWGQGGYHNYWINDANAWIVPEITKAGSTFVDLCSKNFNNDLSTRLFKQAARELLLSESSDWSFILRAGTTTELAKE
RIERHLFRFWKIVEMIKNHSNINLKFLEDIEEEDKVFPDINIDDWRK

Specific function: Unknown

COG id: COG1543

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60579; Mature: 60579

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGQYSPKNVLGQLAIVLHAHLPYVRKNEKNSLEEDWLFQAILECYVPLLQSIESSKKEN
CCCCCCHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PENTKLTISLSPTLLSLLNNKQIQETFPSWIKTRNDFLNELPIEEKNASAFLIKNLNEKY
CCCCEEEEEECHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHH
SYWQNCSGNLIEKFRVLNNSGNLDILTCAATHGYLPILRENPETVKGQINTAIRSHKNIF
HHHHCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCEEECCCCHHHHHHHHHHHHHHHHCC
GTKPLGIWLPECAYYENLDEILINSGIRYAILDGHGILNATPRPRYGVYAPICSRKGVAF
CCCCCCEECCCHHHHCCHHHHHHCCCCEEEEEECCCEECCCCCCCCCEECCCCCCCCCEE
FGRDSESTLPVWSAKDGFPGDKVYREFHKDLGWELPISKLQKKGISTKRPLGLKFHKITD
EECCCCCCCCEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCEEEEEECC
DKVPLGEKAFYLENEAKKKAAEHADDYLLARSKQLEKLILSSSFKPLLVAPFDAELFGHW
CCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHH
WYEGPFFIENILKNSSKYSIKLTNLKEFLLQKPKLQICDPSPSSWGQGGYHNYWINDANA
CCCCHHHHHHHHCCCCCEEEEECCHHHHHHCCCCCEEECCCCCCCCCCCCCCEEEECCCE
WIVPEITKAGSTFVDLCSKNFNNDLSTRLFKQAARELLLSESSDWSFILRAGTTTELAKE
EEECCHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHH
RIERHLFRFWKIVEMIKNHSNINLKFLEDIEEEDKVFPDINIDDWRK
HHHHHHHHHHHHHHHHHCCCCCEEEEHHCCCHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MNGQYSPKNVLGQLAIVLHAHLPYVRKNEKNSLEEDWLFQAILECYVPLLQSIESSKKEN
CCCCCCHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PENTKLTISLSPTLLSLLNNKQIQETFPSWIKTRNDFLNELPIEEKNASAFLIKNLNEKY
CCCCEEEEEECHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHH
SYWQNCSGNLIEKFRVLNNSGNLDILTCAATHGYLPILRENPETVKGQINTAIRSHKNIF
HHHHCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCEEECCCCHHHHHHHHHHHHHHHHCC
GTKPLGIWLPECAYYENLDEILINSGIRYAILDGHGILNATPRPRYGVYAPICSRKGVAF
CCCCCCEECCCHHHHCCHHHHHHCCCCEEEEEECCCEECCCCCCCCCEECCCCCCCCCEE
FGRDSESTLPVWSAKDGFPGDKVYREFHKDLGWELPISKLQKKGISTKRPLGLKFHKITD
EECCCCCCCCEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCEEEEEECC
DKVPLGEKAFYLENEAKKKAAEHADDYLLARSKQLEKLILSSSFKPLLVAPFDAELFGHW
CCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHH
WYEGPFFIENILKNSSKYSIKLTNLKEFLLQKPKLQICDPSPSSWGQGGYHNYWINDANA
CCCCHHHHHHHHCCCCCEEEEECCHHHHHHCCCCCEEECCCCCCCCCCCCCCEEEECCCE
WIVPEITKAGSTFVDLCSKNFNNDLSTRLFKQAARELLLSESSDWSFILRAGTTTELAKE
EEECCHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHH
RIERHLFRFWKIVEMIKNHSNINLKFLEDIEEEDKVFPDINIDDWRK
HHHHHHHHHHHHHHHHHCCCCCEEEEHHCCCHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA