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The map label for this gene is 123968706

Identifier: 123968706

GI number: 123968706

Start: 987708

End: 989180

Strand: Reverse

Name: 123968706

Synonym: A9601_11731

Alternate gene names: NA

Gene position: 989180-987708 (Counterclockwise)

Preceding gene: 123968710

Following gene: 123968703

Centisome position: 59.24

GC content: 31.91

Gene sequence:

>1473_bases
GTGCAAAACATCACAACTTCCCTAAAGAAAATATTTTATCTGTGGAGGCGAAGTCAAGTTCCAGCAAAACAACCAATAAA
ATTTTCAAAGATAGATAATCTCATTATTTTTTTAGTATGCATTTTAATTTCAATAATTTCTTCCTATAAACTACTTATTA
TTTCGCCTTTAAATATCAGAGATATTTCTTCTTGGTTTTTGAACTTTTCTGAAATACTTATTAGTTCCGGTATTTTGATA
TTAGTTTCAAAAAAAGAGAATCCTACAATTTCTTCAAGACAAATCTTCTTGATTATGACTCTTCTTTTAACAGTACAAGC
TACGAAATTAGCCTTAGCTTCAACCATAAGCCCATTATCTATAATAATTCCACCAGCATTAATAATATCTCAAGGAATGG
GAAGCATAACAGCTTTAGCTTGGGTATCAATAGCAAGCTTTAGTTGGCCAGACCCAGCAGTTACTATTAATAATAATTTA
TTTTTTATTTTATTAGTTTGCGCTTCAGTCGTATCTCTACTTGGAGGAAGAATTAGAAGTAGGGCTCAGTTACTTCAATT
ATCAATTTTTGTCCCCTTAGTATCGTTCTTGAGTCAGTGGGTATTGATAGGTAAAGATAGTAAACCTCCTTTTGACAATC
AAGAATTTGTTTTAGCTAACGGGGATATTTTTTCGGATTCCTTACTATTGGCGATAGTAATGCTTTTTACTATATTATTT
ATTCCTATTTTTGAATCGATATTCGGATTATTAACTAAAGCAAGATTACTCGAATTGGCAGATAAGGAGAAACCTTTAAT
TAGAAGATTGTCTCTTGAAGCTCCTGGAACTTTTGAACATACCTTACTAATATGTGGTTTAGCAGAGGAAGCAACAAGAA
TGATTGGTGGCGATATTGATTTAATTAAAACTGGTGGACTATATCATGATGTTGGAAAATTACACGCGCCTAATTGGTTT
ATCGAAAATCAGGATGGTTCAAAAAATCCACATGACGAATTAGATGATCCGATTAAAAGTGCAGAAGTATTACAAGCACA
CGTTGATGAAGGATTGAAATTTGCAAGAAAAAATAGACTACCTAAACCTATAGCTAATTTTATCCCTGAACATCAAGGTA
CTCTAAAAATGGGATATTTTTTTCAAAAAGCTAAAGAAAAAAATCTCGACATTAATGAATATTATTTTAGATACAAAGGC
CCTATCCCTCAGTCAAAAGAAACAGCTATTTTAATGCTTGCAGATGGCTGTGAGGCAGCACTAAGAGCTATGAATATTAA
TGCATCTGATAAAGAAGCTTTGGAAACAATATCTAATATTATCTACTCGCGTCAAAAAGATGGGCAATTAGATGATAGTA
ACTTATCAAAAGGAGAAATCTATCTAATAAAAGGGGCATTCTTGAATGTGTGGAAAAGAATTAGGCATAGAAGAATTCAG
TATCCAACTAGTAAGAATAATACTTTTTCTTGA

Upstream 100 bases:

>100_bases
TTTTTACCGTCTAATTTTAATGACATTTAGAAAAACATCTCCTTTTTACACCTAGCATGCCTATAATTTTAAATTATTCA
AATAGATTTATTTATATTCT

Downstream 100 bases:

>100_bases
TTTTCAATTTTATAACCTAATACTTCTTCGATGTTTTGGATTACACCAATATAGAAGCGCTAATGTACTTAATAAAGTTG
TCAAAAGAGTAAACCCACCA

Product: HD superfamily hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 490; Mature: 490

Protein sequence:

>490_residues
MQNITTSLKKIFYLWRRSQVPAKQPIKFSKIDNLIIFLVCILISIISSYKLLIISPLNIRDISSWFLNFSEILISSGILI
LVSKKENPTISSRQIFLIMTLLLTVQATKLALASTISPLSIIIPPALIISQGMGSITALAWVSIASFSWPDPAVTINNNL
FFILLVCASVVSLLGGRIRSRAQLLQLSIFVPLVSFLSQWVLIGKDSKPPFDNQEFVLANGDIFSDSLLLAIVMLFTILF
IPIFESIFGLLTKARLLELADKEKPLIRRLSLEAPGTFEHTLLICGLAEEATRMIGGDIDLIKTGGLYHDVGKLHAPNWF
IENQDGSKNPHDELDDPIKSAEVLQAHVDEGLKFARKNRLPKPIANFIPEHQGTLKMGYFFQKAKEKNLDINEYYFRYKG
PIPQSKETAILMLADGCEAALRAMNINASDKEALETISNIIYSRQKDGQLDDSNLSKGEIYLIKGAFLNVWKRIRHRRIQ
YPTSKNNTFS

Sequences:

>Translated_490_residues
MQNITTSLKKIFYLWRRSQVPAKQPIKFSKIDNLIIFLVCILISIISSYKLLIISPLNIRDISSWFLNFSEILISSGILI
LVSKKENPTISSRQIFLIMTLLLTVQATKLALASTISPLSIIIPPALIISQGMGSITALAWVSIASFSWPDPAVTINNNL
FFILLVCASVVSLLGGRIRSRAQLLQLSIFVPLVSFLSQWVLIGKDSKPPFDNQEFVLANGDIFSDSLLLAIVMLFTILF
IPIFESIFGLLTKARLLELADKEKPLIRRLSLEAPGTFEHTLLICGLAEEATRMIGGDIDLIKTGGLYHDVGKLHAPNWF
IENQDGSKNPHDELDDPIKSAEVLQAHVDEGLKFARKNRLPKPIANFIPEHQGTLKMGYFFQKAKEKNLDINEYYFRYKG
PIPQSKETAILMLADGCEAALRAMNINASDKEALETISNIIYSRQKDGQLDDSNLSKGEIYLIKGAFLNVWKRIRHRRIQ
YPTSKNNTFS
>Mature_490_residues
MQNITTSLKKIFYLWRRSQVPAKQPIKFSKIDNLIIFLVCILISIISSYKLLIISPLNIRDISSWFLNFSEILISSGILI
LVSKKENPTISSRQIFLIMTLLLTVQATKLALASTISPLSIIIPPALIISQGMGSITALAWVSIASFSWPDPAVTINNNL
FFILLVCASVVSLLGGRIRSRAQLLQLSIFVPLVSFLSQWVLIGKDSKPPFDNQEFVLANGDIFSDSLLLAIVMLFTILF
IPIFESIFGLLTKARLLELADKEKPLIRRLSLEAPGTFEHTLLICGLAEEATRMIGGDIDLIKTGGLYHDVGKLHAPNWF
IENQDGSKNPHDELDDPIKSAEVLQAHVDEGLKFARKNRLPKPIANFIPEHQGTLKMGYFFQKAKEKNLDINEYYFRYKG
PIPQSKETAILMLADGCEAALRAMNINASDKEALETISNIIYSRQKDGQLDDSNLSKGEIYLIKGAFLNVWKRIRHRRIQ
YPTSKNNTFS

Specific function: Unknown

COG id: COG1480

COG function: function code R; Predicted membrane-associated HD superfamily hydrolase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011624
- InterPro:   IPR011621
- InterPro:   IPR003607
- InterPro:   IPR006675 [H]

Pfam domain/function: PF07698 7TM-7TMR_HD; PF07697 7TMR-HDED [H]

EC number: NA

Molecular weight: Translated: 54991; Mature: 54991

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: PS00027 HOMEOBOX_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNITTSLKKIFYLWRRSQVPAKQPIKFSKIDNLIIFLVCILISIISSYKLLIISPLNIR
CCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHH
DISSWFLNFSEILISSGILILVSKKENPTISSRQIFLIMTLLLTVQATKLALASTISPLS
HHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH
IIIPPALIISQGMGSITALAWVSIASFSWPDPAVTINNNLFFILLVCASVVSLLGGRIRS
HHHCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHH
RAQLLQLSIFVPLVSFLSQWVLIGKDSKPPFDNQEFVLANGDIFSDSLLLAIVMLFTILF
HHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHH
IPIFESIFGLLTKARLLELADKEKPLIRRLSLEAPGTFEHTLLICGLAEEATRMIGGDID
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCEEEEEECHHHHHHHHCCCEE
LIKTGGLYHDVGKLHAPNWFIENQDGSKNPHDELDDPIKSAEVLQAHVDEGLKFARKNRL
EEECCCCHHHHHCCCCCCCEEECCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
PKPIANFIPEHQGTLKMGYFFQKAKEKNLDINEYYFRYKGPIPQSKETAILMLADGCEAA
CCHHHHHCCCCCCCEEHHHHHHHHHHCCCCHHHEEEEECCCCCCCCCCEEEEEECCHHHH
LRAMNINASDKEALETISNIIYSRQKDGQLDDSNLSKGEIYLIKGAFLNVWKRIRHRRIQ
HHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCC
YPTSKNNTFS
CCCCCCCCCC
>Mature Secondary Structure
MQNITTSLKKIFYLWRRSQVPAKQPIKFSKIDNLIIFLVCILISIISSYKLLIISPLNIR
CCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHH
DISSWFLNFSEILISSGILILVSKKENPTISSRQIFLIMTLLLTVQATKLALASTISPLS
HHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH
IIIPPALIISQGMGSITALAWVSIASFSWPDPAVTINNNLFFILLVCASVVSLLGGRIRS
HHHCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHH
RAQLLQLSIFVPLVSFLSQWVLIGKDSKPPFDNQEFVLANGDIFSDSLLLAIVMLFTILF
HHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHH
IPIFESIFGLLTKARLLELADKEKPLIRRLSLEAPGTFEHTLLICGLAEEATRMIGGDID
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCEEEEEECHHHHHHHHCCCEE
LIKTGGLYHDVGKLHAPNWFIENQDGSKNPHDELDDPIKSAEVLQAHVDEGLKFARKNRL
EEECCCCHHHHHCCCCCCCEEECCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
PKPIANFIPEHQGTLKMGYFFQKAKEKNLDINEYYFRYKGPIPQSKETAILMLADGCEAA
CCHHHHHCCCCCCCEEHHHHHHHHHHCCCCHHHEEEEECCCCCCCCCCEEEEEECCHHHH
LRAMNINASDKEALETISNIIYSRQKDGQLDDSNLSKGEIYLIKGAFLNVWKRIRHRRIQ
HHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCC
YPTSKNNTFS
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]