Definition Polaromonas naphthalenivorans CJ2 plasmid pPNAP06, complete sequence.
Accession NC_008762
Length 21,611

Click here to switch to the map view.

The map label for this gene is 121583560

Identifier: 121583560

GI number: 121583560

Start: 18290

End: 18595

Strand: Reverse

Name: 121583560

Synonym: Pnap_4989

Alternate gene names: NA

Gene position: 18595-18290 (Counterclockwise)

Preceding gene: 121583561

Following gene: 121583559

Centisome position: 86.04

GC content: 56.54

Gene sequence:

>306_bases
ATGAAGCCAAAGCCGCAGCTTGAGTGGCGTCAGCAGGCGATTGATGACCTGGTGGAAATTGTCGAGTACATCGCCGAAGA
CAACCCCGACGCGGCACAAGAACTCAAGGACGAAATTGAGGAAAAGGCGGCAAAGTTGCCCGATCACCCGAAGCTCTACA
AACCTTCGCCTCGCGTGAAGGGCATGCGTGAGTTGGTGGCCAGGAGCAATTACATCGTGCTCTATCGGGAGACGCCGACG
CTGGTGGAGGTGGTGAACGTGTTCCACGCCCGCCAGCAGTGGCCCACGAGAAAAAAAGAGACTTAG

Upstream 100 bases:

>100_bases
CAGCAAGCCGATGCGTCGCTGGCCGACACGCGGCCCAACGTTTCGCACGAGCAGGCCATGTCCAGCGTTCAAGCAGTGAT
CGACACGAAACGCAAGAAGC

Downstream 100 bases:

>100_bases
CATTAGCGGCTCTGTCAGGTGCTGATACACCCGGCAAAGCCTAACCAAATCCAACTGAGTAAGAGTTAAAAATGGCTGAA
GACAAGAATACCAAAAAGCG

Product: addiction module antitoxin

Products: NA

Alternate protein names: Plasmid Stabilization System Protein; Plasmid Stabilization System; Stability Determinant; Addiction Module xin RelE/StbE Family; Plasmid Stabilization System Protein RelE/ParE Family; Plasmid Stabilisation System Protein; Addiction Module xin RelE/StbE; Plasmid Stabilization-Like Protein Prophage; Addiction Module xin RelE/StbE Family Protein

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MKPKPQLEWRQQAIDDLVEIVEYIAEDNPDAAQELKDEIEEKAAKLPDHPKLYKPSPRVKGMRELVARSNYIVLYRETPT
LVEVVNVFHARQQWPTRKKET

Sequences:

>Translated_101_residues
MKPKPQLEWRQQAIDDLVEIVEYIAEDNPDAAQELKDEIEEKAAKLPDHPKLYKPSPRVKGMRELVARSNYIVLYRETPT
LVEVVNVFHARQQWPTRKKET
>Mature_101_residues
MKPKPQLEWRQQAIDDLVEIVEYIAEDNPDAAQELKDEIEEKAAKLPDHPKLYKPSPRVKGMRELVARSNYIVLYRETPT
LVEVVNVFHARQQWPTRKKET

Specific function: Unknown

COG id: COG3668

COG function: function code R; Plasmid stabilization system protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11895; Mature: 11895

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPKPQLEWRQQAIDDLVEIVEYIAEDNPDAAQELKDEIEEKAAKLPDHPKLYKPSPRVK
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
GMRELVARSNYIVLYRETPTLVEVVNVFHARQQWPTRKKET
HHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKPKPQLEWRQQAIDDLVEIVEYIAEDNPDAAQELKDEIEEKAAKLPDHPKLYKPSPRVK
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
GMRELVARSNYIVLYRETPTLVEVVNVFHARQQWPTRKKET
HHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA