Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612606
Identifier: 120612606
GI number: 120612606
Start: 4397439
End: 4397792
Strand: Direct
Name: 120612606
Synonym: Aave_3967
Alternate gene names: NA
Gene position: 4397439-4397792 (Clockwise)
Preceding gene: 120612600
Following gene: 120612607
Centisome position: 82.15
GC content: 59.6
Gene sequence:
>354_bases ATGTCTGAAATCAAACCCGGCACCCGTGCAACCCAGTCCGTTCTTGACCACCACCTGAACGCATTCCCCCAGGGAATAGA GGAACTACTGAAGGACTACGACGAGAGCTCGGCGCTTGTCACGCCGGACAAGACGTTCAAGGGACGCAAGGAGATAGAAG GATTCTTCCAGGCGTTCCTGGATGGGGCAGACCCGGCGTTCTGGCCGGCTTTCCGGATCACCAGCATGAGCACAGTCGGG GAAGTGGCCTATCTCGTCTGGGAGGCCAAGCCGTTCGTCCCGATGGCGACGGACACTCTCTACGTGCGGGACGGAAAGAT CGCAGTCCAGACCTTCACCGCGTTCTCGGCGTAG
Upstream 100 bases:
>100_bases CATCGATATCGTGTGATCGCGCCGCGCCGATCGCGTGATGCGCTCCGACCGAGCTGCCCGATGGAGGTCGCTCCTGCAAC ACAGTTTGGAGACACACCCC
Downstream 100 bases:
>100_bases CGGGACAGTCGCGGAAGACATCCTCCAGTTCACCGTCGACGGGTCCTCACCGCCGTTGACGATCTGCCAGCGTGACTCCC AGTCGAGCCGGCCCCCTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MSEIKPGTRATQSVLDHHLNAFPQGIEELLKDYDESSALVTPDKTFKGRKEIEGFFQAFLDGADPAFWPAFRITSMSTVG EVAYLVWEAKPFVPMATDTLYVRDGKIAVQTFTAFSA
Sequences:
>Translated_117_residues MSEIKPGTRATQSVLDHHLNAFPQGIEELLKDYDESSALVTPDKTFKGRKEIEGFFQAFLDGADPAFWPAFRITSMSTVG EVAYLVWEAKPFVPMATDTLYVRDGKIAVQTFTAFSA >Mature_116_residues SEIKPGTRATQSVLDHHLNAFPQGIEELLKDYDESSALVTPDKTFKGRKEIEGFFQAFLDGADPAFWPAFRITSMSTVGE VAYLVWEAKPFVPMATDTLYVRDGKIAVQTFTAFSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13010; Mature: 12879
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEIKPGTRATQSVLDHHLNAFPQGIEELLKDYDESSALVTPDKTFKGRKEIEGFFQAFL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHH DGADPAFWPAFRITSMSTVGEVAYLVWEAKPFVPMATDTLYVRDGKIAVQTFTAFSA CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCEEEEECCEEEEEEECCCCC >Mature Secondary Structure SEIKPGTRATQSVLDHHLNAFPQGIEELLKDYDESSALVTPDKTFKGRKEIEGFFQAFL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHH DGADPAFWPAFRITSMSTVGEVAYLVWEAKPFVPMATDTLYVRDGKIAVQTFTAFSA CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCEEEEECCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA