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The map label for this gene is omp32 [H]

Identifier: 120609816

GI number: 120609816

Start: 1233382

End: 1234407

Strand: Reverse

Name: omp32 [H]

Synonym: Aave_1125

Alternate gene names: 120609816

Gene position: 1234407-1233382 (Counterclockwise)

Preceding gene: 120609819

Following gene: 120609813

Centisome position: 23.06

GC content: 65.11

Gene sequence:

>1026_bases
ATGAAAAAAAACCTGATCGCGTTGAGCGCCGCGCTGCTGTGCGCCGCCGGCGCCCACGCCCAGAGTTCGGTCCAGCTGAC
CGGACTGTCGGACATCTACGTGGGCTCCATGAAGATGGCCGGCGATGCGGACCGCCGCTCGGTGGTCAACAGCGGAGGCC
TGACCACCTCGTGGTTCGGCTTCAAGGGCACGGAAGACCTGGGCGGCGGGCTGAAGGCCAGCTTCCAGCTGACCTCCTTC
CTGCAGGTCGACACGGGCACGCAGGGCCGCTTCGCGAACGACACCTTCTTCTCGCGTGACGCGAACGTGAGCCTGTCGGG
CGATTTCGGCTCCGTGCTGCTGGGCCGCTGGATGGCCCCCAACTTCCTGCCGTCGGTGGTGGGCAATCCGCTGGGCGATT
CGTTCACGTTCTCGCCGCTGATCCTGCACATGAACGTGCCCCTGTTCAACGGCACGGGCTGGGCCGCGACGACGCCGGCC
GACACGGGCTGGAGCAACCAGATCGTCTACAGCACGCCGAAGATCGGCGGCTTCTCCGCGAACATCCAGTACCAGTTCGG
CGAGCAGGCGGGCAACAACGGCCGCAAGAACGTGGGCGCGAATTTCTTCTATTTCGGCGGCCCGCTGACGCTGACCGGCT
TCTACGAGCGCGACCAGATCGCCAACCCCGGCCAGGGCGCCTACCTCGGCACCACCAGGAAGGACTGGATGCTGCTGGGC
GCCTATGACTTCGGCATGGTCAAGCCCTTCCTGAGCTACGGCGAGGCCAAGGCCGACAACACCAGCAACAAGGCCAGGAC
GATGCAGATCGGCGCCTCCATCCCCGCGGGTCCCTCGGGCAAGGTGCTGGTGGACTGGGTGAAGACCGAAATGACGCAGA
CCGACATCGACCGCAAGACCTTCACGGTGGGCTACGACTACTTCCTGTCCAAGCGCACCGATGTCTATGCGATGCTGATG
AACGACCGCATCACCGCGCAGGCCAAGGGCAACAGCTTCGGCGTGGGCATCCGCCACCGCTTCTGA

Upstream 100 bases:

>100_bases
CGCGTCTTTCCCGGGTGCGCGGCGGCGGGGCGACCTGCTCCGGTGCCTCCATCCGATCCTTTTCCCCTTTTGTTTGTCTT
TGCCGTTGGACGGGAGTCTT

Downstream 100 bases:

>100_bases
CGCGAGCCTCCTGCAGGACAAAGAGCGCGGGAAGCGATTCCCGCGCTCTTTTTTTCATTGCATGGGGCGTCGCCGCGGGG
ACGGTCAGATCTTGCGCGAC

Product: porin

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MKKNLIALSAALLCAAGAHAQSSVQLTGLSDIYVGSMKMAGDADRRSVVNSGGLTTSWFGFKGTEDLGGGLKASFQLTSF
LQVDTGTQGRFANDTFFSRDANVSLSGDFGSVLLGRWMAPNFLPSVVGNPLGDSFTFSPLILHMNVPLFNGTGWAATTPA
DTGWSNQIVYSTPKIGGFSANIQYQFGEQAGNNGRKNVGANFFYFGGPLTLTGFYERDQIANPGQGAYLGTTRKDWMLLG
AYDFGMVKPFLSYGEAKADNTSNKARTMQIGASIPAGPSGKVLVDWVKTEMTQTDIDRKTFTVGYDYFLSKRTDVYAMLM
NDRITAQAKGNSFGVGIRHRF

Sequences:

>Translated_341_residues
MKKNLIALSAALLCAAGAHAQSSVQLTGLSDIYVGSMKMAGDADRRSVVNSGGLTTSWFGFKGTEDLGGGLKASFQLTSF
LQVDTGTQGRFANDTFFSRDANVSLSGDFGSVLLGRWMAPNFLPSVVGNPLGDSFTFSPLILHMNVPLFNGTGWAATTPA
DTGWSNQIVYSTPKIGGFSANIQYQFGEQAGNNGRKNVGANFFYFGGPLTLTGFYERDQIANPGQGAYLGTTRKDWMLLG
AYDFGMVKPFLSYGEAKADNTSNKARTMQIGASIPAGPSGKVLVDWVKTEMTQTDIDRKTFTVGYDYFLSKRTDVYAMLM
NDRITAQAKGNSFGVGIRHRF
>Mature_341_residues
MKKNLIALSAALLCAAGAHAQSSVQLTGLSDIYVGSMKMAGDADRRSVVNSGGLTTSWFGFKGTEDLGGGLKASFQLTSF
LQVDTGTQGRFANDTFFSRDANVSLSGDFGSVLLGRWMAPNFLPSVVGNPLGDSFTFSPLILHMNVPLFNGTGWAATTPA
DTGWSNQIVYSTPKIGGFSANIQYQFGEQAGNNGRKNVGANFFYFGGPLTLTGFYERDQIANPGQGAYLGTTRKDWMLLG
AYDFGMVKPFLSYGEAKADNTSNKARTMQIGASIPAGPSGKVLVDWVKTEMTQTDIDRKTFTVGYDYFLSKRTDVYAMLM
NDRITAQAKGNSFGVGIRHRF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 36722; Mature: 36722

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNLIALSAALLCAAGAHAQSSVQLTGLSDIYVGSMKMAGDADRRSVVNSGGLTTSWFG
CCCCHHHHHHHHHHHCCCCCCCEEEEECCCEEEEECEEECCCCHHHHHHCCCCCEEEECC
FKGTEDLGGGLKASFQLTSFLQVDTGTQGRFANDTFFSRDANVSLSGDFGSVLLGRWMAP
CCCCHHCCCCEEEEEEEEEEEEECCCCCCCCCCCCEECCCCCEEECCCHHHHHHHHHCCC
NFLPSVVGNPLGDSFTFSPLILHMNVPLFNGTGWAATTPADTGWSNQIVYSTPKIGGFSA
CCCHHHHCCCCCCCCCCCEEEEEEECEEECCCCCEECCCCCCCCCCEEEEECCCCCCEEE
NIQYQFGEQAGNNGRKNVGANFFYFGGPLTLTGFYERDQIANPGQGAYLGTTRKDWMLLG
EEEEEECCCCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCCEECCCCCCEEEEE
AYDFGMVKPFLSYGEAKADNTSNKARTMQIGASIPAGPSGKVLVDWVKTEMTQTDIDRKT
ECCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEHHHHHHHCCCCEE
FTVGYDYFLSKRTDVYAMLMNDRITAQAKGNSFGVGIRHRF
EEEEHHHHHCCCCCEEEEEECCCEEEEECCCEEEEEEEECC
>Mature Secondary Structure
MKKNLIALSAALLCAAGAHAQSSVQLTGLSDIYVGSMKMAGDADRRSVVNSGGLTTSWFG
CCCCHHHHHHHHHHHCCCCCCCEEEEECCCEEEEECEEECCCCHHHHHHCCCCCEEEECC
FKGTEDLGGGLKASFQLTSFLQVDTGTQGRFANDTFFSRDANVSLSGDFGSVLLGRWMAP
CCCCHHCCCCEEEEEEEEEEEEECCCCCCCCCCCCEECCCCCEEECCCHHHHHHHHHCCC
NFLPSVVGNPLGDSFTFSPLILHMNVPLFNGTGWAATTPADTGWSNQIVYSTPKIGGFSA
CCCHHHHCCCCCCCCCCCEEEEEEECEEECCCCCEECCCCCCCCCCEEEEECCCCCCEEE
NIQYQFGEQAGNNGRKNVGANFFYFGGPLTLTGFYERDQIANPGQGAYLGTTRKDWMLLG
EEEEEECCCCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCCEECCCCCCEEEEE
AYDFGMVKPFLSYGEAKADNTSNKARTMQIGASIPAGPSGKVLVDWVKTEMTQTDIDRKT
ECCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEHHHHHHHCCCCEE
FTVGYDYFLSKRTDVYAMLMNDRITAQAKGNSFGVGIRHRF
EEEEHHHHHCCCCCEEEEEECCCEEEEECCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]