Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is hisA
Identifier: 120609727
GI number: 120609727
Start: 1132300
End: 1133046
Strand: Direct
Name: hisA
Synonym: Aave_1034
Alternate gene names: 120609727
Gene position: 1132300-1133046 (Clockwise)
Preceding gene: 120609726
Following gene: 120609737
Centisome position: 21.15
GC content: 67.87
Gene sequence:
>747_bases ATGCTGCTCATCCCCGCCATCGACCTCAAGGACGGACACTGCGTGCGCCTCAAGCAAGGTGACATGGATCAATCGACCAC CTTCGGCGAAGACCCGGCAGCCATGGCGCGCAAGTGGGTGGATGCCGGCGCCCGCCGCCTGCACCTCGTGGACCTGAACG GCGCCTTCGCCGGCGCGCCCAAGAACCACGCCGCGATCAAGGCCATCCTCAAGGAGGTGGGCGACGACCTGCCCGTGCAG CTGGGCGGCGGCATCCGCGACCTGGACACGATCGAGAAATACATCGACGGCGGCCTGCGCTACGTGATCATCGGCACCGC GGCCGTCAAGAACCCCGGATTCCTGAAGGATGCCTGCAGCGCCTTCGGCGGCCACATCATCGTGGGCCTGGACGCCAAGG ACGGCAAGGTCGCCACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGGTCGACCTCGCGAAGAGGTTCGAGGACTGG GGCGTCGAATCCATCGTCTATACCGACATCGGCCGCGACGGCATGCTCTCGGGCATCAACATCGAGGCCACGGTGAAGCT GGCGCAGGCCCTCACCATCCCCGTGATCGCCTCCGGCGGCCTGGCGGGCATGGCCGACATCGAGCAGCTCTGCGCGGTGG AGAGCGAAGGCGTGGAAGGCGTCATCTGCGGCCGTGCGATCTATTCCGGCGACCTCGACTTCGCCGCGGCGCAGGCGCGC GCGGACGAGCTGAACGGCGCGGCCTGA
Upstream 100 bases:
>100_bases GGAATCCCTGAGCAATCTCCCTCGCTTCCTATCCTCTTTCTTCCACCCGGCCGGCACTGGCACGCCCTGCCACGGCATTT CCCCACCTCGTCATTCCATC
Downstream 100 bases:
>100_bases CCCTCCTGCGCCGCAGGTGCGCCGGCCGCTTCAGCAGGCCGGCGGCGGGCGCCCCTGGTTCATGGCCGCCACGGTCTGCA GCAGGGCCGTCCAGTACGAG
Product: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
Products: NA
Alternate protein names: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MLLIPAIDLKDGHCVRLKQGDMDQSTTFGEDPAAMARKWVDAGARRLHLVDLNGAFAGAPKNHAAIKAILKEVGDDLPVQ LGGGIRDLDTIEKYIDGGLRYVIIGTAAVKNPGFLKDACSAFGGHIIVGLDAKDGKVATDGWSKLTGHEVVDLAKRFEDW GVESIVYTDIGRDGMLSGINIEATVKLAQALTIPVIASGGLAGMADIEQLCAVESEGVEGVICGRAIYSGDLDFAAAQAR ADELNGAA
Sequences:
>Translated_248_residues MLLIPAIDLKDGHCVRLKQGDMDQSTTFGEDPAAMARKWVDAGARRLHLVDLNGAFAGAPKNHAAIKAILKEVGDDLPVQ LGGGIRDLDTIEKYIDGGLRYVIIGTAAVKNPGFLKDACSAFGGHIIVGLDAKDGKVATDGWSKLTGHEVVDLAKRFEDW GVESIVYTDIGRDGMLSGINIEATVKLAQALTIPVIASGGLAGMADIEQLCAVESEGVEGVICGRAIYSGDLDFAAAQAR ADELNGAA >Mature_248_residues MLLIPAIDLKDGHCVRLKQGDMDQSTTFGEDPAAMARKWVDAGARRLHLVDLNGAFAGAPKNHAAIKAILKEVGDDLPVQ LGGGIRDLDTIEKYIDGGLRYVIIGTAAVKNPGFLKDACSAFGGHIIVGLDAKDGKVATDGWSKLTGHEVVDLAKRFEDW GVESIVYTDIGRDGMLSGINIEATVKLAQALTIPVIASGGLAGMADIEQLCAVESEGVEGVICGRAIYSGDLDFAAAQAR ADELNGAA
Specific function: Histidine biosynthesis; fourth step. [C]
COG id: COG0106
COG function: function code E; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family
Homologues:
Organism=Escherichia coli, GI87082028, Length=244, Percent_Identity=33.1967213114754, Blast_Score=129, Evalue=1e-31, Organism=Escherichia coli, GI1788336, Length=213, Percent_Identity=24.4131455399061, Blast_Score=70, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS4_ACIAC (A1TKZ3)
Other databases:
- EMBL: CP000512 - RefSeq: YP_969405.1 - ProteinModelPortal: A1TKZ3 - STRING: A1TKZ3 - GeneID: 4668936 - GenomeReviews: CP000512_GR - KEGG: aav:Aave_1034 - NMPDR: fig|397945.5.peg.899 - eggNOG: COG0106 - HOGENOM: HBG541613 - OMA: SIIYTDI - PhylomeDB: A1TKZ3 - ProtClustDB: PRK00748 - BioCyc: AAVE397945:AAVE_1034-MONOMER - GO: GO:0005737 - HAMAP: MF_01014 - InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR006063 - InterPro: IPR023016 - InterPro: IPR011060 - Gene3D: G3DSA:3.20.20.70 - TIGRFAMs: TIGR00007
Pfam domain/function: PF00977 His_biosynth; SSF51366 RibP_bind_barrel
EC number: =5.3.1.16
Molecular weight: Translated: 25956; Mature: 25956
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: ACT_SITE 8-8 ACT_SITE 131-131
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLIPAIDLKDGHCVRLKQGDMDQSTTFGEDPAAMARKWVDAGARRLHLVDLNGAFAGAP CEEEEEEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCC KNHAAIKAILKEVGDDLPVQLGGGIRDLDTIEKYIDGGLRYVIIGTAAVKNPGFLKDACS CCHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHH AFGGHIIVGLDAKDGKVATDGWSKLTGHEVVDLAKRFEDWGVESIVYTDIGRDGMLSGIN HCCCEEEEEEECCCCEEECCCCHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC IEATVKLAQALTIPVIASGGLAGMADIEQLCAVESEGVEGVICGRAIYSGDLDFAAAQAR HHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEECCEEECCCCCHHHHHHH ADELNGAA HHHCCCCC >Mature Secondary Structure MLLIPAIDLKDGHCVRLKQGDMDQSTTFGEDPAAMARKWVDAGARRLHLVDLNGAFAGAP CEEEEEEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCC KNHAAIKAILKEVGDDLPVQLGGGIRDLDTIEKYIDGGLRYVIIGTAAVKNPGFLKDACS CCHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHH AFGGHIIVGLDAKDGKVATDGWSKLTGHEVVDLAKRFEDWGVESIVYTDIGRDGMLSGIN HCCCEEEEEEECCCCEEECCCCHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC IEATVKLAQALTIPVIASGGLAGMADIEQLCAVESEGVEGVICGRAIYSGDLDFAAAQAR HHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEECCEEECCCCCHHHHHHH ADELNGAA HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA