| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is pcaK [H]
Identifier: 120608857
GI number: 120608857
Start: 163588
End: 164913
Strand: Direct
Name: pcaK [H]
Synonym: Aave_0149
Alternate gene names: 120608857
Gene position: 163588-164913 (Clockwise)
Preceding gene: 120608856
Following gene: 120608858
Centisome position: 3.06
GC content: 71.27
Gene sequence:
>1326_bases ATGACCCCATCCATGGCCGCCGGCATCCCGGCGGCAGACCGCGCCGCCTTCGGGCCGCTGCAATTGCGCGTGACGCTGCT GTGCGCCATCGTCGCCATGCTCGACGGCTTCGATACCCAGTCCATCGCCTACGTGGCGCCGCGCATCGCGGAAGACTGGG GCCTCAAGGCCTCCGAGTTCGGCCCCATCTTCGCGGCGGGCCTGTTCGGCCTGATGGCCGGCGCCTTCCTGCTCAGCCCG GCGGCCGACCGCTGGGGCCGCAAGAAGGTGATCCTGCTGTCCACCTGCATCTTCGGCCTGTTCGCGCTGCTCACGGCCTG GGCCACCAGCATGAACGAGCTGCTGGCGTACCGTTTCATCACCGGCGTGGGCCTGGGCGCGGCCATGCCCAACATCATCG CGCTCACCAGCGAATACGCGCCGCAGCGCCTGCGCGCCACGCTGGTCACGGTGATGTTCTGCGGATTCCCGCTGGGCTCC ACGCTGGGCGGGCTCATTTCCAGCTGGCTCATCGCGCATTTCGACTGGCACTCGGTCTTCGTGCTGGGCGGCGTGCTGCC CCTGCTGCTGTTGCCCGTGCTGGCCCTGCTGCTGCCCGAATCGCTGCGCTACCTGGCCGCCAGCGGCGCCGCGCCCGCAC GCTACGAGCCCATCGCGCGCAGTGCCTACCCGGGCGAAGACCCCGCCACGGTGATGGCCGGGCTGCGCGGCGAGGCCGCG GGCGTGCAGGGCGGCTTTTCGGTGTTCGAGCTGTTCCGCCACGGCCGCCTGCACACCACCGTGCTGCTCTGGCTCGCGTT CTTCCTGAACCTGCTGGTCATGTATTTCCTGGTGAACTGGCTGCCCACGCTGCTCAAGAGCGCCGGCCTGCCGCTGGAAA AAGCCATCCTCTCCACCGCCATGCTCAACCTGGGCGGCGTGGTGGGCGCGCTCGTGCTGGGCCGGCTCATCGACCGCTTC AGCGCCTACACCGTGCTGGGCGCGGCCTACGCCGCATCGGCCGGTTTCATCGCGCTGATCGCTTTCAGCGGGCAGAACCT CACGGGCCTGCTGGCCGGCGCCGCGCTCTCGGGCTTCGGCGTGGTGGGCGCGCAGATCGGCTGCAACGCACTGGCCGCCG CCATCTACCCCACCCATATCCGCGCCACCGGCGTGGGCTGGGCGCTGGGCGTGGGGCGCATCGGCGCCATCGTGGGCCCG CTGGCGGGCGGCTCGCTATTGGCCGCGGCCTGGACGCCGTCGTCCATCATCCTGGTGGCCGCCGTGCCGGCGGTGCTCGC AGCCGTGGCGGTGGTGCTGCTCGGGCAGGCGCGGCGCGGCGCCTGA
Upstream 100 bases:
>100_bases CCGGCAGTCCCACGGGCCAGAGATCCGCGGGCCAGGGTGGGGCACACCACCCGGCACTGGCGGGCCGGGCCTTCCATCCA TAAGAACGGAGCGAGACAAA
Downstream 100 bases:
>100_bases GAAGGCATGCCATGCACGACGGCCTTCGCACCTGGACCACCGACGCCGTTCCCCCCGCGCAGCGGGCCGACTACTGGGTC GGCGCCGTCTGCGACTGCTT
Product: major facilitator superfamily transporter
Products: Proton [Cytoplasm]; 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 441; Mature: 440
Protein sequence:
>441_residues MTPSMAAGIPAADRAAFGPLQLRVTLLCAIVAMLDGFDTQSIAYVAPRIAEDWGLKASEFGPIFAAGLFGLMAGAFLLSP AADRWGRKKVILLSTCIFGLFALLTAWATSMNELLAYRFITGVGLGAAMPNIIALTSEYAPQRLRATLVTVMFCGFPLGS TLGGLISSWLIAHFDWHSVFVLGGVLPLLLLPVLALLLPESLRYLAASGAAPARYEPIARSAYPGEDPATVMAGLRGEAA GVQGGFSVFELFRHGRLHTTVLLWLAFFLNLLVMYFLVNWLPTLLKSAGLPLEKAILSTAMLNLGGVVGALVLGRLIDRF SAYTVLGAAYAASAGFIALIAFSGQNLTGLLAGAALSGFGVVGAQIGCNALAAAIYPTHIRATGVGWALGVGRIGAIVGP LAGGSLLAAAWTPSSIILVAAVPAVLAAVAVVLLGQARRGA
Sequences:
>Translated_441_residues MTPSMAAGIPAADRAAFGPLQLRVTLLCAIVAMLDGFDTQSIAYVAPRIAEDWGLKASEFGPIFAAGLFGLMAGAFLLSP AADRWGRKKVILLSTCIFGLFALLTAWATSMNELLAYRFITGVGLGAAMPNIIALTSEYAPQRLRATLVTVMFCGFPLGS TLGGLISSWLIAHFDWHSVFVLGGVLPLLLLPVLALLLPESLRYLAASGAAPARYEPIARSAYPGEDPATVMAGLRGEAA GVQGGFSVFELFRHGRLHTTVLLWLAFFLNLLVMYFLVNWLPTLLKSAGLPLEKAILSTAMLNLGGVVGALVLGRLIDRF SAYTVLGAAYAASAGFIALIAFSGQNLTGLLAGAALSGFGVVGAQIGCNALAAAIYPTHIRATGVGWALGVGRIGAIVGP LAGGSLLAAAWTPSSIILVAAVPAVLAAVAVVLLGQARRGA >Mature_440_residues TPSMAAGIPAADRAAFGPLQLRVTLLCAIVAMLDGFDTQSIAYVAPRIAEDWGLKASEFGPIFAAGLFGLMAGAFLLSPA ADRWGRKKVILLSTCIFGLFALLTAWATSMNELLAYRFITGVGLGAAMPNIIALTSEYAPQRLRATLVTVMFCGFPLGST LGGLISSWLIAHFDWHSVFVLGGVLPLLLLPVLALLLPESLRYLAASGAAPARYEPIARSAYPGEDPATVMAGLRGEAAG VQGGFSVFELFRHGRLHTTVLLWLAFFLNLLVMYFLVNWLPTLLKSAGLPLEKAILSTAMLNLGGVVGALVLGRLIDRFS AYTVLGAAYAASAGFIALIAFSGQNLTGLLAGAALSGFGVVGAQIGCNALAAAIYPTHIRATGVGWALGVGRIGAIVGPL AGGSLLAAAWTPSSIILVAAVPAVLAAVAVVLLGQARRGA
Specific function: Could Be A Transporter For 3-Phenylpropionate (Hydrocinnamic Acid). [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI24308167, Length=460, Percent_Identity=25.4347826086956, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI7662270, Length=213, Percent_Identity=27.2300469483568, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI213021148, Length=461, Percent_Identity=25.5965292841649, Blast_Score=73, Evalue=5e-13, Organism=Homo sapiens, GI8923870, Length=374, Percent_Identity=27.0053475935829, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI20070188, Length=409, Percent_Identity=25.6723716381418, Blast_Score=65, Evalue=1e-10, Organism=Escherichia coli, GI87081723, Length=414, Percent_Identity=37.6811594202899, Blast_Score=206, Evalue=2e-54, Organism=Escherichia coli, GI1788074, Length=372, Percent_Identity=27.1505376344086, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI1788068, Length=443, Percent_Identity=24.1534988713318, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI87082159, Length=397, Percent_Identity=26.1964735516373, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI48994889, Length=149, Percent_Identity=32.2147651006711, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1786229, Length=223, Percent_Identity=26.457399103139, Blast_Score=65, Evalue=6e-12, Organism=Escherichia coli, GI1789207, Length=288, Percent_Identity=24.3055555555556, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI87082404, Length=380, Percent_Identity=22.6315789473684, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI32564663, Length=412, Percent_Identity=23.7864077669903, Blast_Score=104, Evalue=1e-22, Organism=Drosophila melanogaster, GI24640198, Length=478, Percent_Identity=21.7573221757322, Blast_Score=82, Evalue=9e-16, Organism=Drosophila melanogaster, GI24640196, Length=478, Percent_Identity=21.7573221757322, Blast_Score=82, Evalue=9e-16, Organism=Drosophila melanogaster, GI24640200, Length=478, Percent_Identity=21.7573221757322, Blast_Score=82, Evalue=9e-16, Organism=Drosophila melanogaster, GI161077756, Length=463, Percent_Identity=23.7580993520518, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI19922874, Length=438, Percent_Identity=20.5479452054795, Blast_Score=77, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004746 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 45604; Mature: 45472
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1 ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPSMAAGIPAADRAAFGPLQLRVTLLCAIVAMLDGFDTQSIAYVAPRIAEDWGLKASEF CCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHC GPIFAAGLFGLMAGAFLLSPAADRWGRKKVILLSTCIFGLFALLTAWATSMNELLAYRFI CHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TGVGLGAAMPNIIALTSEYAPQRLRATLVTVMFCGFPLGSTLGGLISSWLIAHFDWHSVF HHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHH VLGGVLPLLLLPVLALLLPESLRYLAASGAAPARYEPIARSAYPGEDPATVMAGLRGEAA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCHHHHHHCCCCCCC GVQGGFSVFELFRHGRLHTTVLLWLAFFLNLLVMYFLVNWLPTLLKSAGLPLEKAILSTA CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH MLNLGGVVGALVLGRLIDRFSAYTVLGAAYAASAGFIALIAFSGQNLTGLLAGAALSGFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHCCH VVGAQIGCNALAAAIYPTHIRATGVGWALGVGRIGAIVGPLAGGSLLAAAWTPSSIILVA HHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHH AVPAVLAAVAVVLLGQARRGA HHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TPSMAAGIPAADRAAFGPLQLRVTLLCAIVAMLDGFDTQSIAYVAPRIAEDWGLKASEF CCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHC GPIFAAGLFGLMAGAFLLSPAADRWGRKKVILLSTCIFGLFALLTAWATSMNELLAYRFI CHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TGVGLGAAMPNIIALTSEYAPQRLRATLVTVMFCGFPLGSTLGGLISSWLIAHFDWHSVF HHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHH VLGGVLPLLLLPVLALLLPESLRYLAASGAAPARYEPIARSAYPGEDPATVMAGLRGEAA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCHHHHHHCCCCCCC GVQGGFSVFELFRHGRLHTTVLLWLAFFLNLLVMYFLVNWLPTLLKSAGLPLEKAILSTA CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH MLNLGGVVGALVLGRLIDRFSAYTVLGAAYAASAGFIALIAFSGQNLTGLLAGAALSGFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHCCH VVGAQIGCNALAAAIYPTHIRATGVGWALGVGRIGAIVGPLAGGSLLAAAWTPSSIILVA HHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHH AVPAVLAAVAVVLLGQARRGA HHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; 3-(3-hydroxyphenyl)propionate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + 3-(3-hydroxyphenyl)propionate [Periplasm] = Proton [Cytoplasm] + 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8063101 [H]