Definition Psychromonas ingrahamii 37, complete genome.
Accession NC_008709
Length 4,559,598

Click here to switch to the map view.

The map label for this gene is 119946881

Identifier: 119946881

GI number: 119946881

Start: 4042817

End: 4043077

Strand: Reverse

Name: 119946881

Synonym: Ping_3275

Alternate gene names: NA

Gene position: 4043077-4042817 (Counterclockwise)

Preceding gene: 119946882

Following gene: 119946879

Centisome position: 88.67

GC content: 39.46

Gene sequence:

>261_bases
ATGGCGATTAAAAAAGTTAAATCAGAAGTTGAAAAGTTATCGGCCATTTTGGACGAGGATCTTATTGCTGATAAATGCAC
TGCCGGAGACTTACGGCAGGTACATGATCAGCTTCAAGAGGCTATAAAATCTGGTGATCCGGCAAAATTGATCCGGGATA
AAAAAATTGCCCAGCAACTGATTGTTTTTGAAGAAACTAATCCGGTTGTTGGTAAGGTGATTAAAGACCTCATTTTAGCC
CTTTCCAGCATGGGAATATAA

Upstream 100 bases:

>100_bases
ATGGGTTATTAATCCTAATATTAATAATTTTTTAGCCAAACCACTTAAGGGGAAGATTCAATTGGTTTGGTTTTAATTCA
TTCACTGTACAGAGGTGTTT

Downstream 100 bases:

>100_bases
ACCCGCTGAATTAAAGCGAGTAGGTTTGTATTTTTCCTGAAATATAGACATAAAAAACCGACATCCAGTCGGTTTTTTCA
TTTTATTTGGTTAAACTACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 85

Protein sequence:

>86_residues
MAIKKVKSEVEKLSAILDEDLIADKCTAGDLRQVHDQLQEAIKSGDPAKLIRDKKIAQQLIVFEETNPVVGKVIKDLILA
LSSMGI

Sequences:

>Translated_86_residues
MAIKKVKSEVEKLSAILDEDLIADKCTAGDLRQVHDQLQEAIKSGDPAKLIRDKKIAQQLIVFEETNPVVGKVIKDLILA
LSSMGI
>Mature_85_residues
AIKKVKSEVEKLSAILDEDLIADKCTAGDLRQVHDQLQEAIKSGDPAKLIRDKKIAQQLIVFEETNPVVGKVIKDLILAL
SSMGI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9426; Mature: 9295

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIKKVKSEVEKLSAILDEDLIADKCTAGDLRQVHDQLQEAIKSGDPAKLIRDKKIAQQL
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IVFEETNPVVGKVIKDLILALSSMGI
HHHCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AIKKVKSEVEKLSAILDEDLIADKCTAGDLRQVHDQLQEAIKSGDPAKLIRDKKIAQQL
CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IVFEETNPVVGKVIKDLILALSSMGI
HHHCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA