Definition Psychromonas ingrahamii 37, complete genome.
Accession NC_008709
Length 4,559,598

Click here to switch to the map view.

The map label for this gene is 119944792

Identifier: 119944792

GI number: 119944792

Start: 1304820

End: 1306304

Strand: Direct

Name: 119944792

Synonym: Ping_1034

Alternate gene names: NA

Gene position: 1304820-1306304 (Clockwise)

Preceding gene: 119944786

Following gene: 119944793

Centisome position: 28.62

GC content: 43.43

Gene sequence:

>1485_bases
ATGAAGCACTACAACAAACTTTCTGAGCATTATAAAAAAATTGCCAATTTTGAACACTTGGCCTCGGTCGCCGGCTGGGA
TCAGGCGGTGATGATGCCTGCGGGGGGCAATGAATCTCGGGCAAAAGCCATGGCTGAACTCTCCGTTCATATACATCAGT
TATCAACGTCGGAACATCTTGGAGAATTGTTTGCTGATGCGCAATCGGAAAATATAAGCGCTATTGAGTCCGCGAGTTTA
CGTGAAATGAAAGCGTCATGGCAAAAAGCGACTGTGCTACCGGCTCGTTTGGTAGAGGCTCAATCATTAGCCGGTTCTAA
ATGCGGACACGCCTGGCGTACGCAACGCGGCGAAAATGATTGGCAGGGATTTTCTAAAAACTTTGCCGAGGTGGTGTTGT
TATCTCAAGAAGAAGCGTCGATTCGAGCAGATGCCGCTAATAAAACCCCCTATGATGCCATGTTAGATCTTTATGAACCT
GGCACGACGAGTGAGCAGCTAGATAGTATTTTTGGAAATTTAAAAACCTGGCTGCCTGATTTAACTCAGAAAGTTCAGCT
GCGCCAAAGCGGTCAGCAATTTATCAAACCGACGGAAAATTACAGTACTAAGCAGCAGAATGCGCTTGGTCTGGATATTA
TGAAGCTGCTTGAGTTTGATTTTAATCACGGGCGATTAGATATCAGTGCACACCCCTTCTGTGGTGGCACCAGTCAAGAT
GTCCGGATCACAACACGTTATGATGAAACGGACTTTATACAATCTATGATGGGCATTGTCCATGAAACCGGGCATGCCCG
TTACGAGCAGGGTTTACCCAAATCACTCAAGGGGCTGCCGGTTGGTGAAGCCCGTTCGATGGGTATCCATGAATCTCAAA
GTCTCTTTTTTGAAATGCAGTTGGGCCGCAGTAAGGAATTTATTGATCAACTTGTGCCCTTAGTTTTAAAACATTTTCCG
GATAATAATCCTGCCGTATTTGAGGCTGATAATCTGCAGAAAATATACACGCGTGTTAATCCCGGATTAATTCGCGTTGA
TGCCGATGAGGTCACGTATCCAGCTCATATTATGTTACGTTATGAAATAGAACGTGATTTAATGAATGGCAATATCAATT
ATACGGATATCCCGGAATTATGGGATCTTAAAATGCAGCAATATTTAGGTATTTCAACTGCGGGTAACTACAAAAATGGT
TGTATGCAGGATATACACTGGACAGATGGCGCGTTTGGATATTTTCCCAGTTATACCTTGGGCGCTATGTACGCGGCGCA
GTTTATGACCGCGATGAAAAAACAGGTGGACGTTAATACCTGTCTGAGCGAACAAAATTTAAAGCCTATTTTCAATTGGT
TAAATAAAAATATTTGGAGCAAAGCAAGTTTATTGACAACCGATCAGTTAGTTAAGCAGGCAACAGGTGAAACCCTTAAC
CCCGCTTTATACGGGAAGCATCTGCAACAAAGATATTTAAGTTAA

Upstream 100 bases:

>100_bases
GGATCGCGTAGAATAACTATTTGAATTTAAATTGATTTCCGTATTGCTTTTTTTCAAGCAGATAAATAATCATTTCACCT
TTGATTCGTAGGATAAAATT

Downstream 100 bases:

>100_bases
GATTTTCCAATTTATGCAGTTTATGCATAGATAATATGATTAAGTTTCATTTTTTTCATAAACTATTTTGACCTAAAATA
TCTATTTTTTAAAGCATCTT

Product: carboxypeptidase Taq

Products: NA

Alternate protein names: Carboxypeptidase Taq [H]

Number of amino acids: Translated: 494; Mature: 494

Protein sequence:

>494_residues
MKHYNKLSEHYKKIANFEHLASVAGWDQAVMMPAGGNESRAKAMAELSVHIHQLSTSEHLGELFADAQSENISAIESASL
REMKASWQKATVLPARLVEAQSLAGSKCGHAWRTQRGENDWQGFSKNFAEVVLLSQEEASIRADAANKTPYDAMLDLYEP
GTTSEQLDSIFGNLKTWLPDLTQKVQLRQSGQQFIKPTENYSTKQQNALGLDIMKLLEFDFNHGRLDISAHPFCGGTSQD
VRITTRYDETDFIQSMMGIVHETGHARYEQGLPKSLKGLPVGEARSMGIHESQSLFFEMQLGRSKEFIDQLVPLVLKHFP
DNNPAVFEADNLQKIYTRVNPGLIRVDADEVTYPAHIMLRYEIERDLMNGNINYTDIPELWDLKMQQYLGISTAGNYKNG
CMQDIHWTDGAFGYFPSYTLGAMYAAQFMTAMKKQVDVNTCLSEQNLKPIFNWLNKNIWSKASLLTTDQLVKQATGETLN
PALYGKHLQQRYLS

Sequences:

>Translated_494_residues
MKHYNKLSEHYKKIANFEHLASVAGWDQAVMMPAGGNESRAKAMAELSVHIHQLSTSEHLGELFADAQSENISAIESASL
REMKASWQKATVLPARLVEAQSLAGSKCGHAWRTQRGENDWQGFSKNFAEVVLLSQEEASIRADAANKTPYDAMLDLYEP
GTTSEQLDSIFGNLKTWLPDLTQKVQLRQSGQQFIKPTENYSTKQQNALGLDIMKLLEFDFNHGRLDISAHPFCGGTSQD
VRITTRYDETDFIQSMMGIVHETGHARYEQGLPKSLKGLPVGEARSMGIHESQSLFFEMQLGRSKEFIDQLVPLVLKHFP
DNNPAVFEADNLQKIYTRVNPGLIRVDADEVTYPAHIMLRYEIERDLMNGNINYTDIPELWDLKMQQYLGISTAGNYKNG
CMQDIHWTDGAFGYFPSYTLGAMYAAQFMTAMKKQVDVNTCLSEQNLKPIFNWLNKNIWSKASLLTTDQLVKQATGETLN
PALYGKHLQQRYLS
>Mature_494_residues
MKHYNKLSEHYKKIANFEHLASVAGWDQAVMMPAGGNESRAKAMAELSVHIHQLSTSEHLGELFADAQSENISAIESASL
REMKASWQKATVLPARLVEAQSLAGSKCGHAWRTQRGENDWQGFSKNFAEVVLLSQEEASIRADAANKTPYDAMLDLYEP
GTTSEQLDSIFGNLKTWLPDLTQKVQLRQSGQQFIKPTENYSTKQQNALGLDIMKLLEFDFNHGRLDISAHPFCGGTSQD
VRITTRYDETDFIQSMMGIVHETGHARYEQGLPKSLKGLPVGEARSMGIHESQSLFFEMQLGRSKEFIDQLVPLVLKHFP
DNNPAVFEADNLQKIYTRVNPGLIRVDADEVTYPAHIMLRYEIERDLMNGNINYTDIPELWDLKMQQYLGISTAGNYKNG
CMQDIHWTDGAFGYFPSYTLGAMYAAQFMTAMKKQVDVNTCLSEQNLKPIFNWLNKNIWSKASLLTTDQLVKQATGETLN
PALYGKHLQQRYLS

Specific function: Releases amino acids sequentially from the C-terminus with a broad substrate specificity (except for proline) [H]

COG id: COG2317

COG function: function code E; Zn-dependent carboxypeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M32 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001333 [H]

Pfam domain/function: PF02074 Peptidase_M32 [H]

EC number: =3.4.17.19 [H]

Molecular weight: Translated: 55779; Mature: 55779

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHYNKLSEHYKKIANFEHLASVAGWDQAVMMPAGGNESRAKAMAELSVHIHQLSTSEHL
CCHHHHHHHHHHHHHCHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
GELFADAQSENISAIESASLREMKASWQKATVLPARLVEAQSLAGSKCGHAWRTQRGEND
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCH
WQGFSKNFAEVVLLSQEEASIRADAANKTPYDAMLDLYEPGTTSEQLDSIFGNLKTWLPD
HHHHHHCHHHEEEECCCCHHHCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
LTQKVQLRQSGQQFIKPTENYSTKQQNALGLDIMKLLEFDFNHGRLDISAHPFCGGTSQD
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCC
VRITTRYDETDFIQSMMGIVHETGHARYEQGLPKSLKGLPVGEARSMGIHESQSLFFEMQ
EEEEEECCHHHHHHHHHHHHHHCCCHHHHCCCCHHHCCCCCCCHHCCCCCCCHHEEEEEC
LGRSKEFIDQLVPLVLKHFPDNNPAVFEADNLQKIYTRVNPGLIRVDADEVTYPAHIMLR
CCCCHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHCCCCEEEECCCCCCCCEEEEEE
YEIERDLMNGNINYTDIPELWDLKMQQYLGISTAGNYKNGCMQDIHWTDGAFGYFPSYTL
EEEHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
GAMYAAQFMTAMKKQVDVNTCLSEQNLKPIFNWLNKNIWSKASLLTTDQLVKQATGETLN
HHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PALYGKHLQQRYLS
HHHHHHHHHHHHCC
>Mature Secondary Structure
MKHYNKLSEHYKKIANFEHLASVAGWDQAVMMPAGGNESRAKAMAELSVHIHQLSTSEHL
CCHHHHHHHHHHHHHCHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
GELFADAQSENISAIESASLREMKASWQKATVLPARLVEAQSLAGSKCGHAWRTQRGEND
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCH
WQGFSKNFAEVVLLSQEEASIRADAANKTPYDAMLDLYEPGTTSEQLDSIFGNLKTWLPD
HHHHHHCHHHEEEECCCCHHHCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
LTQKVQLRQSGQQFIKPTENYSTKQQNALGLDIMKLLEFDFNHGRLDISAHPFCGGTSQD
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCC
VRITTRYDETDFIQSMMGIVHETGHARYEQGLPKSLKGLPVGEARSMGIHESQSLFFEMQ
EEEEEECCHHHHHHHHHHHHHHCCCHHHHCCCCHHHCCCCCCCHHCCCCCCCHHEEEEEC
LGRSKEFIDQLVPLVLKHFPDNNPAVFEADNLQKIYTRVNPGLIRVDADEVTYPAHIMLR
CCCCHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHCCCCEEEECCCCCCCCEEEEEE
YEIERDLMNGNINYTDIPELWDLKMQQYLGISTAGNYKNGCMQDIHWTDGAFGYFPSYTL
EEEHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
GAMYAAQFMTAMKKQVDVNTCLSEQNLKPIFNWLNKNIWSKASLLTTDQLVKQATGETLN
HHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PALYGKHLQQRYLS
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7765282; 1369078 [H]