Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is tam [C]

Identifier: 119776444

GI number: 119776444

Start: 3942137

End: 3942772

Strand: Direct

Name: tam [C]

Synonym: Sama_3312

Alternate gene names: 119776444

Gene position: 3942137-3942772 (Clockwise)

Preceding gene: 119776443

Following gene: 119776448

Centisome position: 91.55

GC content: 57.39

Gene sequence:

>636_bases
ATGTCAGGCCACATCAGCGCCGCCGAAACCGCGCAAACCGTTACCACCTTCGACAAACATGCCAGGGCCTACAAAGACGC
CTTTGTGGCACTGCCAGCTTACCTCGCCACCTTCGATGTACTGGCCGATATGATGTGTTCTGGCCACACGCGCTTGTTGG
ATTTAGCCTGCGGCCCGGGTACCTTGAGCCTGCATCTCAAGTCACGTTTCCCCCACCTTGCCATCACGGGTACCGACTTA
TCGCCACGTATGCTGTCGCTGGCCAAAGCCGCGCTGCCCGATGGCGAGTTCCATTGTCTTGATCTTCGCGATACCTCACG
GCTTGCGGGCGAGTTTGACGTAATTGCCTGTGCCTTTGGTTTGCCTTATCTCGATAGCCAAAGCGCCGCGCAGTTGTTAC
AGGACTGCGCCGCCAAACTGGCGAAGGGAGGCCTTATGTATCTGAGTTTTATCGAGTGCGACACCACTCCCCACAGCCAA
ACCAACAGCCACGGCGACAGCGTGTGGCGTCAGGGCCACACTGCCGAGGGCATAGACTCGCAACTGAGTGCGCAGGGACT
TAAGCCGCTGTGGCAGCATCACACAGTAACCCGCGGCGAAACCGAGCACTTTGTAATCGCCATTAAAGGCGAATAA

Upstream 100 bases:

>100_bases
CGGTCTTTTTTTATTGCTTACGTTTTGCACTCAAGCCTTTAAGCACCATGCTGACAAAGGCAAAACCGCGAATGGAGCCG
CATCAGCTAGGGAGCACATT

Downstream 100 bases:

>100_bases
AAAAAGCCGGTCGGTGACCGGCATTTTTAACTCTAAGGCTAAGGCTTACTTACAGTTACGGCCCTTACAGGTACCGCCTG
TATTGCCGCCGCCGCTGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: Ubiquinone/Menaquinone Biosynthesis Methylase; Methyltransferase; Methyltransferase Domain Family

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MSGHISAAETAQTVTTFDKHARAYKDAFVALPAYLATFDVLADMMCSGHTRLLDLACGPGTLSLHLKSRFPHLAITGTDL
SPRMLSLAKAALPDGEFHCLDLRDTSRLAGEFDVIACAFGLPYLDSQSAAQLLQDCAAKLAKGGLMYLSFIECDTTPHSQ
TNSHGDSVWRQGHTAEGIDSQLSAQGLKPLWQHHTVTRGETEHFVIAIKGE

Sequences:

>Translated_211_residues
MSGHISAAETAQTVTTFDKHARAYKDAFVALPAYLATFDVLADMMCSGHTRLLDLACGPGTLSLHLKSRFPHLAITGTDL
SPRMLSLAKAALPDGEFHCLDLRDTSRLAGEFDVIACAFGLPYLDSQSAAQLLQDCAAKLAKGGLMYLSFIECDTTPHSQ
TNSHGDSVWRQGHTAEGIDSQLSAQGLKPLWQHHTVTRGETEHFVIAIKGE
>Mature_210_residues
SGHISAAETAQTVTTFDKHARAYKDAFVALPAYLATFDVLADMMCSGHTRLLDLACGPGTLSLHLKSRFPHLAITGTDLS
PRMLSLAKAALPDGEFHCLDLRDTSRLAGEFDVIACAFGLPYLDSQSAAQLLQDCAAKLAKGGLMYLSFIECDTTPHSQT
NSHGDSVWRQGHTAEGIDSQLSAQGLKPLWQHHTVTRGETEHFVIAIKGE

Specific function: Catalyzes The S-Adenosylmethionine Monomethyl Esterification Of Trans-Aconitate At High Affinity And Of Cis- Aconitate, Isocitrate, And Citrate At Lower Velocities And Affinities. [C]

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.1.1.144 [C]

Molecular weight: Translated: 22781; Mature: 22650

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGHISAAETAQTVTTFDKHARAYKDAFVALPAYLATFDVLADMMCSGHTRLLDLACGPG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC
TLSLHLKSRFPHLAITGTDLSPRMLSLAKAALPDGEFHCLDLRDTSRLAGEFDVIACAFG
EEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHCCCHHEEEEECC
LPYLDSQSAAQLLQDCAAKLAKGGLMYLSFIECDTTPHSQTNSHGDSVWRQGHTAEGIDS
CCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHHHCCCCCCCCHH
QLSAQGLKPLWQHHTVTRGETEHFVIAIKGE
HHHHHCCCHHHHHCCCCCCCCCEEEEEEECC
>Mature Secondary Structure 
SGHISAAETAQTVTTFDKHARAYKDAFVALPAYLATFDVLADMMCSGHTRLLDLACGPG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC
TLSLHLKSRFPHLAITGTDLSPRMLSLAKAALPDGEFHCLDLRDTSRLAGEFDVIACAFG
EEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHCCCHHEEEEECC
LPYLDSQSAAQLLQDCAAKLAKGGLMYLSFIECDTTPHSQTNSHGDSVWRQGHTAEGIDS
CCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHHHCCCCCCCCHH
QLSAQGLKPLWQHHTVTRGETEHFVIAIKGE
HHHHHCCCHHHHHCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA