Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774198

Identifier: 119774198

GI number: 119774198

Start: 1284363

End: 1286669

Strand: Reverse

Name: 119774198

Synonym: Sama_1061

Alternate gene names: NA

Gene position: 1286669-1284363 (Counterclockwise)

Preceding gene: 119774199

Following gene: 119774192

Centisome position: 29.88

GC content: 54.36

Gene sequence:

>2307_bases
ATGTATCCAATCCTCAGGGCAAGCCTGCTTGCCAGCAGCCTGCTATTTTCAATCTTCCCGACATTCGCCGAAGAACAGCT
TGCCCAACAATTGGTGGATGTTCGCACCCGAGATGGTGTTTCCCAATATTTCAAACGCACCAATGGGCTGCCTCTGCAGG
GGGAATTTTTGCTTACCCGCGAAGATGGCAGCTTTACCCAGGCCGGGTTTGACGCAGGCCTGCCTCACGGCCACTGGCAG
ACTTACTATGGTCCATCCCAGCCCATGACCAAGGGGCATTTTATACAGGGTAAGCAACAGGGCGAGTGGCAAACATTCAG
CAGCAGCGGCGCCTTGGTGGAGATCCAGCAATTCGATAAGGGCCTGGCGGAAGGCAACTGGCAGCAGTTCAACGCCAAGG
GGGCAGTTGTGGAGCAGCGCCGTTACTCTGCTGGCGATCTGGTACTTGCCGAGCGATTTTTCAGCACCGGACAAGTGGCT
GAAGTGGAGCGCTACCGGCAAAACTTTCGTCACGGTCAGTGGCAACAATTCCATGAAAACGGCCAACTGGCCATGAATGC
CCAGTTTGCCGACAACCTGCCAACGGGAGAGCTTACCCATTACTATGCGTCCGGTGAGCGCAAGCTACTTGGCCAGTACG
ATACCAAGGGGCAACGCACGGGCAAATGGCAGGAATGGGACAGTCAGGGGCGGCTTAGCCTGGAAACTGAGTACAGCGAA
GATACGAAAAATGGCCTGGAGCAGCACTTCTATCCTGACGGTCAGCCAGAAACCCAGTGCAATTTCCTCGGCGGCCAGCC
CCATGGCGAATGCCAAAGCTTCAGCAGTGAAGGACTGCTCCGGGTAAAAGAGCAGTATTACAAAGGCAAGCTGGAAGGTG
AGCAGCTGTATTATGACGACGAAGGCAGCCTGAGGACCAAACTGCAGTATCAGGGCGGCATCAAGGCGGGCATTCAGCAG
CGCTTTCACCCCAACGGCCAGTTGGCAGAGCTTGAGACACTGGCGTCCGACCGCCCCGCCGACAATGGCCAGTATCCGCT
GCATGGCAAGCAGGAAAGTTATAACAGTGACGGGCAGCTGCAACAATCCAGTGGCTACCAGCGTGGCCTTCGCGAGGGTG
AGTTTTTGCGCTTTCAGGGGGATACCCTTGTTGAATCGAGCCATTGGTTACAAGGCGTTCGCCACGGCGATGTACGCACC
TTTTATCCGTCAGGCAAACCCAAGGCATTTGATCAGTATGTAAATGGCACACTCGAGGGTATATCGGAGCGCTACTACGA
CGATGGCAAACTCCAGGCCAGAGGCGAAATGCGCAATGGACTCTGGGTGGGCCGCTATGAAAGCTTTTACCGGGACGGCA
CACCTCAGGAGCTCAAACATTTCGCCAAAAAAAAGCCAGCCAATGCCAACCAGTACCCACTGGAAGGCGAGTACAGCCGC
TGGTATGCCAATGGCGACCTGAACGAGACAGGCCTCTATGAACAGGGCAAGAAAACCGGCCTGTGGCGCCAATATCAACA
GGGACTGATAAGCAGCGAGCAGGAATATCTAACCGATAAGCTAAACGGTAAGTACACCCAATATTATGAAGGCCGCCAGC
GCACCAGTGGCCAGTACAGGGACAACCAAAAAGAAGGTCAATGGATTGAGTATCGCTACGAAGAGAAAGACCCCACCTTT
GGCCCAATCCCCGAAGGCAATGTCTACAGCAAGACCCAATACCATGCCGGGAAGCGCCATGGCAAAGAAGAGCTCTTCTC
TTTCAGTGGGGTACGTTATCGCCTGACCACCTTCGACATGGGCGCCAAAACCGGTGACTATCAAACCTTTTTCGTCACTA
ATGGCCAACTGGAACAAAGTGGCAAGCTCATCAAGGGCAATAAAACCGGGCAGTGGCAATCCTGGTATGAAAATGGCCTG
CCCAAATGGGTTGCAACCTATGAGGATGACAAGCTCAACGGCCCTCGCAAGACTTTCTACGACGACGGTCAGACCAAGTC
CGAGGGCGATTATCAGCATGACCAGCCAAGCGGTAACCACAAAGAGTACTATCCAACAGGCGCCCTCAAAGCGGAGGAGT
CATGGCTCAACGGGCGCCGTGAAGGTGAAGCCCGTTATTTCCACCCCAATGGCAAACTCTCAGAGCGGGGCAGCTTTATC
AAAGACAGGAAAGAAGGCCTGTGGCTGAGCTTTTGGCCTGGTGGCGAGAAACGTATTGAGGGCAGCTATATTGCCGACCG
ACAATCCGGAGACTGGCAGTTCTTCGATCAGTTCGGCAAGCTGATTAAAACCGAGCATCACAACTGA

Upstream 100 bases:

>100_bases
GATGAGCGTATGTACGCGCAAAAGCGCAGCAGACACAAAGTAGCAGGTAAAGCACCAGCCTGAACCTGACTTACCCGGGA
ATTACAACAAGGACGTGTAG

Downstream 100 bases:

>100_bases
TACCAGTCAGCAGGCTAAGGGCAAAAAAGCTAAGGGCATTCCACGTGAATGCCCTTATTGTTATCCGCCAATGTCGAACG
TAGGTTAACGTCCAGCGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: Phosphatidylinositol-4-Phosphate 5-Kinase; Phophatidylinositol-4-Phosphate 5-Kinase; MORN Repeat-Containing Protein; Morn Variant Repeat-Containing Protein; Tetratricopeptide Tpr_1 Repeat-Containing Protein; Morn Variant Repeat Protein; Glucosyltransferase-S; Tetratricopeptide Repeat Protein

Number of amino acids: Translated: 768; Mature: 768

Protein sequence:

>768_residues
MYPILRASLLASSLLFSIFPTFAEEQLAQQLVDVRTRDGVSQYFKRTNGLPLQGEFLLTREDGSFTQAGFDAGLPHGHWQ
TYYGPSQPMTKGHFIQGKQQGEWQTFSSSGALVEIQQFDKGLAEGNWQQFNAKGAVVEQRRYSAGDLVLAERFFSTGQVA
EVERYRQNFRHGQWQQFHENGQLAMNAQFADNLPTGELTHYYASGERKLLGQYDTKGQRTGKWQEWDSQGRLSLETEYSE
DTKNGLEQHFYPDGQPETQCNFLGGQPHGECQSFSSEGLLRVKEQYYKGKLEGEQLYYDDEGSLRTKLQYQGGIKAGIQQ
RFHPNGQLAELETLASDRPADNGQYPLHGKQESYNSDGQLQQSSGYQRGLREGEFLRFQGDTLVESSHWLQGVRHGDVRT
FYPSGKPKAFDQYVNGTLEGISERYYDDGKLQARGEMRNGLWVGRYESFYRDGTPQELKHFAKKKPANANQYPLEGEYSR
WYANGDLNETGLYEQGKKTGLWRQYQQGLISSEQEYLTDKLNGKYTQYYEGRQRTSGQYRDNQKEGQWIEYRYEEKDPTF
GPIPEGNVYSKTQYHAGKRHGKEELFSFSGVRYRLTTFDMGAKTGDYQTFFVTNGQLEQSGKLIKGNKTGQWQSWYENGL
PKWVATYEDDKLNGPRKTFYDDGQTKSEGDYQHDQPSGNHKEYYPTGALKAEESWLNGRREGEARYFHPNGKLSERGSFI
KDRKEGLWLSFWPGGEKRIEGSYIADRQSGDWQFFDQFGKLIKTEHHN

Sequences:

>Translated_768_residues
MYPILRASLLASSLLFSIFPTFAEEQLAQQLVDVRTRDGVSQYFKRTNGLPLQGEFLLTREDGSFTQAGFDAGLPHGHWQ
TYYGPSQPMTKGHFIQGKQQGEWQTFSSSGALVEIQQFDKGLAEGNWQQFNAKGAVVEQRRYSAGDLVLAERFFSTGQVA
EVERYRQNFRHGQWQQFHENGQLAMNAQFADNLPTGELTHYYASGERKLLGQYDTKGQRTGKWQEWDSQGRLSLETEYSE
DTKNGLEQHFYPDGQPETQCNFLGGQPHGECQSFSSEGLLRVKEQYYKGKLEGEQLYYDDEGSLRTKLQYQGGIKAGIQQ
RFHPNGQLAELETLASDRPADNGQYPLHGKQESYNSDGQLQQSSGYQRGLREGEFLRFQGDTLVESSHWLQGVRHGDVRT
FYPSGKPKAFDQYVNGTLEGISERYYDDGKLQARGEMRNGLWVGRYESFYRDGTPQELKHFAKKKPANANQYPLEGEYSR
WYANGDLNETGLYEQGKKTGLWRQYQQGLISSEQEYLTDKLNGKYTQYYEGRQRTSGQYRDNQKEGQWIEYRYEEKDPTF
GPIPEGNVYSKTQYHAGKRHGKEELFSFSGVRYRLTTFDMGAKTGDYQTFFVTNGQLEQSGKLIKGNKTGQWQSWYENGL
PKWVATYEDDKLNGPRKTFYDDGQTKSEGDYQHDQPSGNHKEYYPTGALKAEESWLNGRREGEARYFHPNGKLSERGSFI
KDRKEGLWLSFWPGGEKRIEGSYIADRQSGDWQFFDQFGKLIKTEHHN
>Mature_768_residues
MYPILRASLLASSLLFSIFPTFAEEQLAQQLVDVRTRDGVSQYFKRTNGLPLQGEFLLTREDGSFTQAGFDAGLPHGHWQ
TYYGPSQPMTKGHFIQGKQQGEWQTFSSSGALVEIQQFDKGLAEGNWQQFNAKGAVVEQRRYSAGDLVLAERFFSTGQVA
EVERYRQNFRHGQWQQFHENGQLAMNAQFADNLPTGELTHYYASGERKLLGQYDTKGQRTGKWQEWDSQGRLSLETEYSE
DTKNGLEQHFYPDGQPETQCNFLGGQPHGECQSFSSEGLLRVKEQYYKGKLEGEQLYYDDEGSLRTKLQYQGGIKAGIQQ
RFHPNGQLAELETLASDRPADNGQYPLHGKQESYNSDGQLQQSSGYQRGLREGEFLRFQGDTLVESSHWLQGVRHGDVRT
FYPSGKPKAFDQYVNGTLEGISERYYDDGKLQARGEMRNGLWVGRYESFYRDGTPQELKHFAKKKPANANQYPLEGEYSR
WYANGDLNETGLYEQGKKTGLWRQYQQGLISSEQEYLTDKLNGKYTQYYEGRQRTSGQYRDNQKEGQWIEYRYEEKDPTF
GPIPEGNVYSKTQYHAGKRHGKEELFSFSGVRYRLTTFDMGAKTGDYQTFFVTNGQLEQSGKLIKGNKTGQWQSWYENGL
PKWVATYEDDKLNGPRKTFYDDGQTKSEGDYQHDQPSGNHKEYYPTGALKAEESWLNGRREGEARYFHPNGKLSERGSFI
KDRKEGLWLSFWPGGEKRIEGSYIADRQSGDWQFFDQFGKLIKTEHHN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 88455; Mature: 88455

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYPILRASLLASSLLFSIFPTFAEEQLAQQLVDVRTRDGVSQYFKRTNGLPLQGEFLLTR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCEEEEE
EDGSFTQAGFDAGLPHGHWQTYYGPSQPMTKGHFIQGKQQGEWQTFSSSGALVEIQQFDK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCEEECCCCCEEEHHHHHC
GLAEGNWQQFNAKGAVVEQRRYSAGDLVLAERFFSTGQVAEVERYRQNFRHGQWQQFHEN
HHHCCCCEEECCCCCCHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHCC
GQLAMNAQFADNLPTGELTHYYASGERKLLGQYDTKGQRTGKWQEWDSQGRLSLETEYSE
CCEEEEEECCCCCCCCCEEEEEECCCHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCH
DTKNGLEQHFYPDGQPETQCNFLGGQPHGECQSFSSEGLLRVKEQYYKGKLEGEQLYYDD
HHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHCCCCCCHHHHHHHHHCCCCCCCEEEECC
EGSLRTKLQYQGGIKAGIQQRFHPNGQLAELETLASDRPADNGQYPLHGKQESYNSDGQL
CCCEEEEEEECCCCHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCE
QQSSGYQRGLREGEFLRFQGDTLVESSHWLQGVRHGDVRTFYPSGKPKAFDQYVNGTLEG
EHHCCHHHCCCCCCEEEECCCCCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHH
ISERYYDDGKLQARGEMRNGLWVGRYESFYRDGTPQELKHFAKKKPANANQYPLEGEYSR
HHHHHCCCCCEEECCHHCCCEEEECHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCE
WYANGDLNETGLYEQGKKTGLWRQYQQGLISSEQEYLTDKLNGKYTQYYEGRQRTSGQYR
EEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCEEEHHCCHHHCCCCCC
DNQKEGQWIEYRYEEKDPTFGPIPEGNVYSKTQYHAGKRHGKEELFSFSGVRYRLTTFDM
CCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHCCCEEEEEEEEC
GAKTGDYQTFFVTNGQLEQSGKLIKGNKTGQWQSWYENGLPKWVATYEDDKLNGPRKTFY
CCCCCCEEEEEEECCCHHHCCCEEECCCCCCHHHHHHCCCCCEEEECCCCCCCCCCCCCC
DDGQTKSEGDYQHDQPSGNHKEYYPTGALKAEESWLNGRREGEARYFHPNGKLSERGSFI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEECCCCCHHHCCCHH
KDRKEGLWLSFWPGGEKRIEGSYIADRQSGDWQFFDQFGKLIKTEHHN
HHHCCCCEEEECCCCCCEECCCEEECCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MYPILRASLLASSLLFSIFPTFAEEQLAQQLVDVRTRDGVSQYFKRTNGLPLQGEFLLTR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCEEEEE
EDGSFTQAGFDAGLPHGHWQTYYGPSQPMTKGHFIQGKQQGEWQTFSSSGALVEIQQFDK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCEEECCCCCEEEHHHHHC
GLAEGNWQQFNAKGAVVEQRRYSAGDLVLAERFFSTGQVAEVERYRQNFRHGQWQQFHEN
HHHCCCCEEECCCCCCHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHCC
GQLAMNAQFADNLPTGELTHYYASGERKLLGQYDTKGQRTGKWQEWDSQGRLSLETEYSE
CCEEEEEECCCCCCCCCEEEEEECCCHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCH
DTKNGLEQHFYPDGQPETQCNFLGGQPHGECQSFSSEGLLRVKEQYYKGKLEGEQLYYDD
HHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHCCCCCCHHHHHHHHHCCCCCCCEEEECC
EGSLRTKLQYQGGIKAGIQQRFHPNGQLAELETLASDRPADNGQYPLHGKQESYNSDGQL
CCCEEEEEEECCCCHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCE
QQSSGYQRGLREGEFLRFQGDTLVESSHWLQGVRHGDVRTFYPSGKPKAFDQYVNGTLEG
EHHCCHHHCCCCCCEEEECCCCCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHH
ISERYYDDGKLQARGEMRNGLWVGRYESFYRDGTPQELKHFAKKKPANANQYPLEGEYSR
HHHHHCCCCCEEECCHHCCCEEEECHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCE
WYANGDLNETGLYEQGKKTGLWRQYQQGLISSEQEYLTDKLNGKYTQYYEGRQRTSGQYR
EEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCEEEHHCCHHHCCCCCC
DNQKEGQWIEYRYEEKDPTFGPIPEGNVYSKTQYHAGKRHGKEELFSFSGVRYRLTTFDM
CCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHCCCEEEEEEEEC
GAKTGDYQTFFVTNGQLEQSGKLIKGNKTGQWQSWYENGLPKWVATYEDDKLNGPRKTFY
CCCCCCEEEEEEECCCHHHCCCEEECCCCCCHHHHHHCCCCCEEEECCCCCCCCCCCCCC
DDGQTKSEGDYQHDQPSGNHKEYYPTGALKAEESWLNGRREGEARYFHPNGKLSERGSFI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEECCCCCHHHCCCHH
KDRKEGLWLSFWPGGEKRIEGSYIADRQSGDWQFFDQFGKLIKTEHHN
HHHCCCCEEEECCCCCCEECCCEEECCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA