Definition Paracoccus denitrificans PD1222 chromosome 2, complete sequence.
Accession NC_008687
Length 1,730,097

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The map label for this gene is 119386186

Identifier: 119386186

GI number: 119386186

Start: 620705

End: 622696

Strand: Direct

Name: 119386186

Synonym: Pden_3474

Alternate gene names: NA

Gene position: 620705-622696 (Clockwise)

Preceding gene: 119386185

Following gene: 119386189

Centisome position: 35.88

GC content: 68.02

Gene sequence:

>1992_bases
ATGACCGAGCAACATCCCTCCCGCCATGTCTTCCGCACCAGCCAGTTGGAGGAGGCCGACGGACCGGGCCACAATCCGAC
CGAAAATCGCACCATGGGCGAAATCATCGCGGCCCGCTTCTCGCGCCGCGGCTTCCTGAAGGGCTCGATGGCTGCGACCG
CGATCTCGGCCACCGTCAGCCCCTTCGCCCTGCTGGCTGCCGACGAGGCCCGCGCCCAGGATGCCGTCGAGGGCTCCGCC
TTCAGCTTTCCCGAGGTCGAGGCGGGCGTCGATGCCGACCATCACGTCGCCCAGGGCTATGACGCGGACATCCTGCTGCG
CTGGGGCGACAAGGTCTTTGCCGATGCGCCGGATTTCGACCCGAAGAACCAGTCCGAGGCCGCGCAGGAACGCCAGTTCG
GCTATAACAACGACTTCGTCGGCTTCATCCCGCTGGACGGCGCCGATGACCGCGGCCTGCTGGTCGTCAACCACGAATAT
ACCAACGAACACCTGATGTTCCCCGGCATCGTTACCGTCGAGGACGGCAAGATCGCCGTGGCCGAGGCGACCGAGGCGCG
CGTGGACATCGAGATGGCCGCGCATGGCGGCACGGTGATCGAGATCCGCAAGGTGGACGGAAAATGGCAGCCGGTGCTGG
ACGGCGCGCTGAACCGCCGCATCACCGCCAAGACGCCGATGGAGATCTGCGGCCCGGCCACCGGGCATGCGCGGATGCAG
ACCGCGGCGGACCCGACCGGCACCCGCGTCCTGGGCACGATCAACAACTGCGCCGGCGGCGTCACGCCCTGGGGCACCTA
CATCATGGCCGAGGAGAACATCCACGGCTATTTCACCGGCGCGCTGCCCGAAGGCCACCGCGAGGCCGAAAACTACAAGC
GCATGGGCATCCCCGAGGACAGCTATGCCTGGGGCAGGTTCCACGACCGCTTCGACATCGGCAAGGAACCGAACGAGCCC
AACCGCTTTGGCTGGATCGTCGAGGTCGATGTCATGGACCCCACCTCGACCCCCAGGAAGCGCACCGCGCTTGGCCGCTT
CAAGCACGAGGGGGCGGCGAGCGCCTTGGCCAAGGACGGCCGCGTCGTCTTCTACCTGGGCGACGATGAGCGTTTCGACT
ATGTCTACAAGTTCGTGACCGCCGGCCGCTACAACCCGGACGACCGCGCCGCGAACCTGGACCTGCTGGACGAGGGCACG
CTTTACGTCGCGCGCTTCGACGAGGATGGCAGCTTCGTCTGGCTGCCGCTGGTGCATGGGCAGGGGCCGCTGACCGCCGA
GAACGGCTTCGAGAGCCAGGCCGACGTGCTGATCGAGACCCGCCGCGCCGCCGACCTGCTGGGCGCGACGCCGATGGACC
GCCCCGAGGACATCGAGCCCAATGCCGAGACCGGCCGGGCCTATGTCATGCTGACCAACAACACCAAGCGCGAAGAGGCG
AACGCCGCCAACCCGCGCGTGGAGAACGCCTTCGGCCATATCATCGAGATTCTCGAGGATGGCGGCGACCTGGCGGCGAC
GCAGGGCACCTGGGAGATCCTGCTGCAATGCGGCGATCCTTCGGTGGCCGAGGTCGGCGCGACCTTCTCGACCGCGACCA
CTGCGAATGGCTGGTTCGGCATGCCCGACAACTGCGCCATCGACAGCGACGGGCGGCTGTGGGTCTCGACCGACGGCAAC
TCGCCCAAGGATACGGGCCGCACCGACGGCCTGTGGGCGGTGGATGTCGAGGGCGCCGCGCGGGGCACCTCGCGGCTGTT
CTATCGGGTGCCCGTGGGTGCCGAGATGTGCGGCCCCTGTCCGACGCCGGACCTGACCACCTTTTTCGTGGCCGTGCAGC
ATCCGGGCGATGGCGGCGAGGATTGGGAGGGCCACGGCCGGCCGTCCTATTACGAGGACCTGTCGACCCGCTGGCCGGAT
TTCCGCGACGACATGCCGGTGCGCCCGGCGGTGGTGGCGATCACGAAACAGGGCGGCGGCCGGATCGGCTGA

Upstream 100 bases:

>100_bases
CCATCGTTTCCGGCCCTGTCACTCTTTGGTCAAACTGGGCCGCTATGGAGGGGTCGGTCCCGTCTCTGGCCGGGGCCGCC
CCATCAGCCAGGAGCGTCTC

Downstream 100 bases:

>100_bases
CCGGACGCCGGATCGGGAAAGGGGGCGAAAGACCGCCCCCTTTTCCGCTTGCCGGCCCTGCGCCGATGACCTTGTTTGCC
CTTCCGCCCTCAGCCCCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: Phosphatase; Tat Pathway Signal Sequence Domain-Containing Protein; Tat Pathway Signal Sequence Domain Protein; Twin-Arginine Translocation Pathway Signal Protein; UxpB Protein; DTDP-Glucose 4 6-Dehydratase; Twin Arginine Translocation Pathway Signal Protein; Phosphatase-Like Protein; DTDP-D-Glucose 4 6-Dehydratase; Glutamate-Cysteine Ligase/Putative Amino Acid Ligase; Alkaline Phosphatase Family Protein; Exported Protein

Number of amino acids: Translated: 663; Mature: 662

Protein sequence:

>663_residues
MTEQHPSRHVFRTSQLEEADGPGHNPTENRTMGEIIAARFSRRGFLKGSMAATAISATVSPFALLAADEARAQDAVEGSA
FSFPEVEAGVDADHHVAQGYDADILLRWGDKVFADAPDFDPKNQSEAAQERQFGYNNDFVGFIPLDGADDRGLLVVNHEY
TNEHLMFPGIVTVEDGKIAVAEATEARVDIEMAAHGGTVIEIRKVDGKWQPVLDGALNRRITAKTPMEICGPATGHARMQ
TAADPTGTRVLGTINNCAGGVTPWGTYIMAEENIHGYFTGALPEGHREAENYKRMGIPEDSYAWGRFHDRFDIGKEPNEP
NRFGWIVEVDVMDPTSTPRKRTALGRFKHEGAASALAKDGRVVFYLGDDERFDYVYKFVTAGRYNPDDRAANLDLLDEGT
LYVARFDEDGSFVWLPLVHGQGPLTAENGFESQADVLIETRRAADLLGATPMDRPEDIEPNAETGRAYVMLTNNTKREEA
NAANPRVENAFGHIIEILEDGGDLAATQGTWEILLQCGDPSVAEVGATFSTATTANGWFGMPDNCAIDSDGRLWVSTDGN
SPKDTGRTDGLWAVDVEGAARGTSRLFYRVPVGAEMCGPCPTPDLTTFFVAVQHPGDGGEDWEGHGRPSYYEDLSTRWPD
FRDDMPVRPAVVAITKQGGGRIG

Sequences:

>Translated_663_residues
MTEQHPSRHVFRTSQLEEADGPGHNPTENRTMGEIIAARFSRRGFLKGSMAATAISATVSPFALLAADEARAQDAVEGSA
FSFPEVEAGVDADHHVAQGYDADILLRWGDKVFADAPDFDPKNQSEAAQERQFGYNNDFVGFIPLDGADDRGLLVVNHEY
TNEHLMFPGIVTVEDGKIAVAEATEARVDIEMAAHGGTVIEIRKVDGKWQPVLDGALNRRITAKTPMEICGPATGHARMQ
TAADPTGTRVLGTINNCAGGVTPWGTYIMAEENIHGYFTGALPEGHREAENYKRMGIPEDSYAWGRFHDRFDIGKEPNEP
NRFGWIVEVDVMDPTSTPRKRTALGRFKHEGAASALAKDGRVVFYLGDDERFDYVYKFVTAGRYNPDDRAANLDLLDEGT
LYVARFDEDGSFVWLPLVHGQGPLTAENGFESQADVLIETRRAADLLGATPMDRPEDIEPNAETGRAYVMLTNNTKREEA
NAANPRVENAFGHIIEILEDGGDLAATQGTWEILLQCGDPSVAEVGATFSTATTANGWFGMPDNCAIDSDGRLWVSTDGN
SPKDTGRTDGLWAVDVEGAARGTSRLFYRVPVGAEMCGPCPTPDLTTFFVAVQHPGDGGEDWEGHGRPSYYEDLSTRWPD
FRDDMPVRPAVVAITKQGGGRIG
>Mature_662_residues
TEQHPSRHVFRTSQLEEADGPGHNPTENRTMGEIIAARFSRRGFLKGSMAATAISATVSPFALLAADEARAQDAVEGSAF
SFPEVEAGVDADHHVAQGYDADILLRWGDKVFADAPDFDPKNQSEAAQERQFGYNNDFVGFIPLDGADDRGLLVVNHEYT
NEHLMFPGIVTVEDGKIAVAEATEARVDIEMAAHGGTVIEIRKVDGKWQPVLDGALNRRITAKTPMEICGPATGHARMQT
AADPTGTRVLGTINNCAGGVTPWGTYIMAEENIHGYFTGALPEGHREAENYKRMGIPEDSYAWGRFHDRFDIGKEPNEPN
RFGWIVEVDVMDPTSTPRKRTALGRFKHEGAASALAKDGRVVFYLGDDERFDYVYKFVTAGRYNPDDRAANLDLLDEGTL
YVARFDEDGSFVWLPLVHGQGPLTAENGFESQADVLIETRRAADLLGATPMDRPEDIEPNAETGRAYVMLTNNTKREEAN
AANPRVENAFGHIIEILEDGGDLAATQGTWEILLQCGDPSVAEVGATFSTATTANGWFGMPDNCAIDSDGRLWVSTDGNS
PKDTGRTDGLWAVDVEGAARGTSRLFYRVPVGAEMCGPCPTPDLTTFFVAVQHPGDGGEDWEGHGRPSYYEDLSTRWPDF
RDDMPVRPAVVAITKQGGGRIG

Specific function: Unknown

COG id: COG3211

COG function: function code R; Predicted phosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 72278; Mature: 72146

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEQHPSRHVFRTSQLEEADGPGHNPTENRTMGEIIAARFSRRGFLKGSMAATAISATVS
CCCCCCCCCEEECCCCHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC
PFALLAADEARAQDAVEGSAFSFPEVEAGVDADHHVAQGYDADILLRWGDKVFADAPDFD
CEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCEEEEEECCEEECCCCCCC
PKNQSEAAQERQFGYNNDFVGFIPLDGADDRGLLVVNHEYTNEHLMFPGIVTVEDGKIAV
CCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEECCCEEEEECCCEEE
AEATEARVDIEMAAHGGTVIEIRKVDGKWQPVLDGALNRRITAKTPMEICGPATGHARMQ
EECCCCEEEEEEECCCCEEEEEEECCCCCCHHHHHHHCCEEECCCCHHHCCCCCCCCEEE
TAADPTGTRVLGTINNCAGGVTPWGTYIMAEENIHGYFTGALPEGHREAENYKRMGIPED
ECCCCCCCEEEEEHHHCCCCCCCCCEEEEEECCCCEEEECCCCCCHHHHHHHHHCCCCCC
SYAWGRFHDRFDIGKEPNEPNRFGWIVEVDVMDPTSTPRKRTALGRFKHEGAASALAKDG
CCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHCCC
RVVFYLGDDERFDYVYKFVTAGRYNPDDRAANLDLLDEGTLYVARFDEDGSFVWLPLVHG
EEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCEEECCCEEEEEEECCCCCEEEEEEEEC
QGPLTAENGFESQADVLIETRRAADLLGATPMDRPEDIEPNAETGRAYVMLTNNTKREEA
CCCCCCCCCCCCCCHHEEEHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCC
NAANPRVENAFGHIIEILEDGGDLAATQGTWEILLQCGDPSVAEVGATFSTATTANGWFG
CCCCCCHHHHHHHHHHHHHCCCCEEECCCCEEEEEECCCCCHHHHCCEEECCCCCCCCCC
MPDNCAIDSDGRLWVSTDGNSPKDTGRTDGLWAVDVEGAARGTSRLFYRVPVGAEMCGPC
CCCCCEECCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCHHHCCCC
PTPDLTTFFVAVQHPGDGGEDWEGHGRPSYYEDLSTRWPDFRDDMPVRPAVVAITKQGGG
CCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCC
RIG
CCC
>Mature Secondary Structure 
TEQHPSRHVFRTSQLEEADGPGHNPTENRTMGEIIAARFSRRGFLKGSMAATAISATVS
CCCCCCCCEEECCCCHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC
PFALLAADEARAQDAVEGSAFSFPEVEAGVDADHHVAQGYDADILLRWGDKVFADAPDFD
CEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCEEEEEECCEEECCCCCCC
PKNQSEAAQERQFGYNNDFVGFIPLDGADDRGLLVVNHEYTNEHLMFPGIVTVEDGKIAV
CCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEECCCEEEEECCCEEE
AEATEARVDIEMAAHGGTVIEIRKVDGKWQPVLDGALNRRITAKTPMEICGPATGHARMQ
EECCCCEEEEEEECCCCEEEEEEECCCCCCHHHHHHHCCEEECCCCHHHCCCCCCCCEEE
TAADPTGTRVLGTINNCAGGVTPWGTYIMAEENIHGYFTGALPEGHREAENYKRMGIPED
ECCCCCCCEEEEEHHHCCCCCCCCCEEEEEECCCCEEEECCCCCCHHHHHHHHHCCCCCC
SYAWGRFHDRFDIGKEPNEPNRFGWIVEVDVMDPTSTPRKRTALGRFKHEGAASALAKDG
CCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHCCC
RVVFYLGDDERFDYVYKFVTAGRYNPDDRAANLDLLDEGTLYVARFDEDGSFVWLPLVHG
EEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCEEECCCEEEEEEECCCCCEEEEEEEEC
QGPLTAENGFESQADVLIETRRAADLLGATPMDRPEDIEPNAETGRAYVMLTNNTKREEA
CCCCCCCCCCCCCCHHEEEHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCC
NAANPRVENAFGHIIEILEDGGDLAATQGTWEILLQCGDPSVAEVGATFSTATTANGWFG
CCCCCCHHHHHHHHHHHHHCCCCEEECCCCEEEEEECCCCCHHHHCCEEECCCCCCCCCC
MPDNCAIDSDGRLWVSTDGNSPKDTGRTDGLWAVDVEGAARGTSRLFYRVPVGAEMCGPC
CCCCCEECCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCHHHCCCC
PTPDLTTFFVAVQHPGDGGEDWEGHGRPSYYEDLSTRWPDFRDDMPVRPAVVAITKQGGG
CCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCC
RIG
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA