Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

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The map label for this gene is 119356836

Identifier: 119356836

GI number: 119356836

Start: 1147552

End: 1148325

Strand: Direct

Name: 119356836

Synonym: Cpha266_1009

Alternate gene names: NA

Gene position: 1147552-1148325 (Clockwise)

Preceding gene: 119356835

Following gene: 119356848

Centisome position: 36.62

GC content: 49.48

Gene sequence:

>774_bases
ATGCTGATAACGGCAGAAACTCTCCGGCATGAACTGGAGGCTATCGCAGATCCTGCGGTGGCGGCTGTTTCGAAAAGCTT
TTTCAAGACGGGCCCTGGAGAGTATGGGGAGGGTGATCTTTTTCGTGGAATTCGTGTGCCGGTGCTCAGAAAAATCTCCC
GACGTTCTGAAGCTCTTTGTCTTGACGGAATCGTTGAGCTGCTTCACTCTCCTTTTCATGAAGACAGGTTGCTTGCTCTT
CTTGTGCTTGTCAGGCGCTTTTCTCATGCAAGCGAGAGTGCGCGCGAGGAGTTGTTTGATCTGTACCTGTCAAATACGCT
CTTCATCAATAACTGGGATCTCGTTGATACCTCAGCCGAACATCTGGTAGGATGCTTCCTTTTCAACAGGGATAAAGCGC
CTCTCTATCGGCTGGTGCTCTCCGAATGCATTTGGGAAAGGCGTATTGCCATAATAGCAACTTTTTATTTTATCAGGCAT
GGACGGTTTGGCGAAACCCTCGACCTTGCAGAACAACTTCTTTTTGATCCAGAAGAACTGATTCATAAAGCAGCCGGATG
GATGCTCAGGGAGGTGGGCAAGCGTGACCAGCAGCTTGAGGAGGCTTTTCTGGTTAAGCATTACCGGTTGATGCCGAGAG
TCATGCTCCGCTATGCCATTGAACGGTTTGCGGAGGAGAAACGGCAACTCTATCTTAAAGGGCTTGTGCCGGATCGGTTT
CAGGGGTTCAGTAATACTGAACAGGATGAGTTGTTGCCGGGTTACCTGATTTGA

Upstream 100 bases:

>100_bases
ACAGCTTGGTTCGGAACTTAATCAGGTACAGGAGAAACTGGAAAAACAGATTTTGCGATGGACGGAACTTGCAGAAATGG
CATAACATGCTCAAACCCCT

Downstream 100 bases:

>100_bases
AATTCAGGATGGCCGGTTTGCCACAGTCCGAAACTCAATACATCGGCAAGGGATTCAAACTCCATCTGTTTCGTGTTTCC
CATGCCGTGTCCGGCCTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: DNA Alkylation Repair Protein; DNA Alkylation Repair Superfamily; Glucose/Ribitol Dehydrogenase

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MLITAETLRHELEAIADPAVAAVSKSFFKTGPGEYGEGDLFRGIRVPVLRKISRRSEALCLDGIVELLHSPFHEDRLLAL
LVLVRRFSHASESAREELFDLYLSNTLFINNWDLVDTSAEHLVGCFLFNRDKAPLYRLVLSECIWERRIAIIATFYFIRH
GRFGETLDLAEQLLFDPEELIHKAAGWMLREVGKRDQQLEEAFLVKHYRLMPRVMLRYAIERFAEEKRQLYLKGLVPDRF
QGFSNTEQDELLPGYLI

Sequences:

>Translated_257_residues
MLITAETLRHELEAIADPAVAAVSKSFFKTGPGEYGEGDLFRGIRVPVLRKISRRSEALCLDGIVELLHSPFHEDRLLAL
LVLVRRFSHASESAREELFDLYLSNTLFINNWDLVDTSAEHLVGCFLFNRDKAPLYRLVLSECIWERRIAIIATFYFIRH
GRFGETLDLAEQLLFDPEELIHKAAGWMLREVGKRDQQLEEAFLVKHYRLMPRVMLRYAIERFAEEKRQLYLKGLVPDRF
QGFSNTEQDELLPGYLI
>Mature_257_residues
MLITAETLRHELEAIADPAVAAVSKSFFKTGPGEYGEGDLFRGIRVPVLRKISRRSEALCLDGIVELLHSPFHEDRLLAL
LVLVRRFSHASESAREELFDLYLSNTLFINNWDLVDTSAEHLVGCFLFNRDKAPLYRLVLSECIWERRIAIIATFYFIRH
GRFGETLDLAEQLLFDPEELIHKAAGWMLREVGKRDQQLEEAFLVKHYRLMPRVMLRYAIERFAEEKRQLYLKGLVPDRF
QGFSNTEQDELLPGYLI

Specific function: Unknown

COG id: COG4912

COG function: function code L; Predicted DNA alkylation repair enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29857; Mature: 29857

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLITAETLRHELEAIADPAVAAVSKSFFKTGPGEYGEGDLFRGIRVPVLRKISRRSEALC
CEECHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHH
LDGIVELLHSPFHEDRLLALLVLVRRFSHASESAREELFDLYLSNTLFINNWDLVDTSAE
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCHH
HLVGCFLFNRDKAPLYRLVLSECIWERRIAIIATFYFIRHGRFGETLDLAEQLLFDPEEL
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHH
IHKAAGWMLREVGKRDQQLEEAFLVKHYRLMPRVMLRYAIERFAEEKRQLYLKGLVPDRF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
QGFSNTEQDELLPGYLI
CCCCCCCHHHCCCCCCC
>Mature Secondary Structure
MLITAETLRHELEAIADPAVAAVSKSFFKTGPGEYGEGDLFRGIRVPVLRKISRRSEALC
CEECHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHH
LDGIVELLHSPFHEDRLLALLVLVRRFSHASESAREELFDLYLSNTLFINNWDLVDTSAE
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCHH
HLVGCFLFNRDKAPLYRLVLSECIWERRIAIIATFYFIRHGRFGETLDLAEQLLFDPEEL
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHH
IHKAAGWMLREVGKRDQQLEEAFLVKHYRLMPRVMLRYAIERFAEEKRQLYLKGLVPDRF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
QGFSNTEQDELLPGYLI
CCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA