Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
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Accession | NC_008600 |
Length | 5,257,091 |
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The map label for this gene is nagE [H]
Identifier: 118476189
GI number: 118476189
Start: 495981
End: 497492
Strand: Direct
Name: nagE [H]
Synonym: BALH_0438
Alternate gene names: 118476189
Gene position: 495981-497492 (Clockwise)
Preceding gene: 118476186
Following gene: 118476190
Centisome position: 9.43
GC content: 38.29
Gene sequence:
>1512_bases TTGATAGGGGGAATTAAAATGTTGCAGTTTCTACAACGTATTGGTAAAGCGTTAATGCTTCCAATCGCCGTACTACCAGC AGCAGGATTATTGCTTCGTTTAGGACAAGAAGACGTATTTAACATTCCTGTTATGGCACAGGCCGGTGCAGCAATTTTTG ATAATTTAGCACTTATTTTTGCAATTGGTGTTGCAATCGGTTTGTCTGTTGACGGTAGTGGGGCAGCTGGGCTTGCCGGA GCAATCGGATATCTTGTTTTACAAAATACAACGAATGCTCTAAGTAAGACGTATTCAGCAGCAGAGTTAAATGATAAATT AAAAAGTGTTCAAGATTTAGTCGGTTCAGTAGATCCAACTAAATTAGCAGATACAATGACAAAGGTTTCAAAAGCAGCGG CGTTAACGCCAAAAATAAATATGGCCATACTCGGTGGTATTATTGCAGGGGTTGTTGCGGGATTACTATACAACAAATTC CATAAGATTAAACTACCAGAATGGTTAGGATTCTTTGCAGGAAAACGCTTCGTACCAATCATTACTTCAATCGTAATGTT ACTTTTAGGATTAGTATTCGGTCAAATTTGGCCAACAATTCAAAGTGGTATTGATGCAGTGGCACATGGTATCGTGAACT TAGGTTCAATTGGTGCTGGTTTATTTGGATTATTAAACCGTTTATTAATTCCAATTGGTTTACACCACGTAATGAACACA TACTTCTGGTTCGTACTTGGTGACTTTACAAATGCAGCTGGCGATATTGTTCATGGTGATATTGCACGTTTCTTTGCAAA AGATCCATCAGCAGGTATGTTTATGACTGGTTTCTTCCCAGTTATGATGTTCGGTTTACCAGCAGCATGTTTCGCAATGA TTGCAGCTGCTAAACCAGAAAAACGTAAAATGGTTACAGGTATGTTAGGTGGTCTAGCATTAACTTCATTCTTAACTGGT ATTACAGAGCCAATTGAATTCTCATTCATGTTCTTATCACCAGTATTATATGGAATTCATGCTGTATTAACAGGTCTGTC TCTATTCATTACAACAACACTTGGCATTCATGATGGTTTCTCATTTAGTGCCGGGGCAATCGATTACGTTTTAAACTTCG GTATTGCAACAAAACCATTGTTACTAGCAGGAATCGGTTTAATTTACGCAGCAATTTACTTTGTAGTATTCTACTTCTTA ATTAAGAAGTTCGACCTAAAAACTCCTGGTCGTGAAGATGAAGAGGAAGTAGCTGAAGGCGAAGAAGCTCCAGTTGCAGG TTCAATTGGTGAAACTTACGTAGCAGCTTTAGGTGGAAAAGAAAACTTAACAGTTATTGATAACTGTGCAACACGTCTAC GCTTACAAGTGAAAGATGCTGGTCAAGTAAACGAAGCAGCATTAAAACGTGCTGGTGCAAAAGGTGTTATGAAATTAAGT AACACGAGTGTCCAAGTTATCGTAGGTACAAATGTTGAATCTGTTGCCGATGATATGAAAAAACACGTATAA
Upstream 100 bases:
>100_bases AAAATAAAAACTACACATCTATACAACTATATGTTATTATGGTTATGTAAATAGAAAGCGTTTTCTAAGGCGTACTTATA ATGATAACGATTTCATAAAT
Downstream 100 bases:
>100_bases ATAATTAGATAAGAGGATATCCAAAAAGATTGATAACATCAATTTTTTAGAGGGTATCCTCTTTTTTATGTTAAAAATTT AACGGGAATCTTACTTTTGT
Product: PTS system N-acetylglucosamine-specific transporter subunit IIBC
Products: NA
Alternate protein names: EIICB-Nag; N-acetylglucosamine permease IIC component; PTS system N-acetylglucosamine-specific EIIC component; N-acetylglucosamine-specific phosphotransferase enzyme IIB component; PTS system N-acetylglucosamine-specific EIIB component [H]
Number of amino acids: Translated: 503; Mature: 503
Protein sequence:
>503_residues MIGGIKMLQFLQRIGKALMLPIAVLPAAGLLLRLGQEDVFNIPVMAQAGAAIFDNLALIFAIGVAIGLSVDGSGAAGLAG AIGYLVLQNTTNALSKTYSAAELNDKLKSVQDLVGSVDPTKLADTMTKVSKAAALTPKINMAILGGIIAGVVAGLLYNKF HKIKLPEWLGFFAGKRFVPIITSIVMLLLGLVFGQIWPTIQSGIDAVAHGIVNLGSIGAGLFGLLNRLLIPIGLHHVMNT YFWFVLGDFTNAAGDIVHGDIARFFAKDPSAGMFMTGFFPVMMFGLPAACFAMIAAAKPEKRKMVTGMLGGLALTSFLTG ITEPIEFSFMFLSPVLYGIHAVLTGLSLFITTTLGIHDGFSFSAGAIDYVLNFGIATKPLLLAGIGLIYAAIYFVVFYFL IKKFDLKTPGREDEEEVAEGEEAPVAGSIGETYVAALGGKENLTVIDNCATRLRLQVKDAGQVNEAALKRAGAKGVMKLS NTSVQVIVGTNVESVADDMKKHV
Sequences:
>Translated_503_residues MIGGIKMLQFLQRIGKALMLPIAVLPAAGLLLRLGQEDVFNIPVMAQAGAAIFDNLALIFAIGVAIGLSVDGSGAAGLAG AIGYLVLQNTTNALSKTYSAAELNDKLKSVQDLVGSVDPTKLADTMTKVSKAAALTPKINMAILGGIIAGVVAGLLYNKF HKIKLPEWLGFFAGKRFVPIITSIVMLLLGLVFGQIWPTIQSGIDAVAHGIVNLGSIGAGLFGLLNRLLIPIGLHHVMNT YFWFVLGDFTNAAGDIVHGDIARFFAKDPSAGMFMTGFFPVMMFGLPAACFAMIAAAKPEKRKMVTGMLGGLALTSFLTG ITEPIEFSFMFLSPVLYGIHAVLTGLSLFITTTLGIHDGFSFSAGAIDYVLNFGIATKPLLLAGIGLIYAAIYFVVFYFL IKKFDLKTPGREDEEEVAEGEEAPVAGSIGETYVAALGGKENLTVIDNCATRLRLQVKDAGQVNEAALKRAGAKGVMKLS NTSVQVIVGTNVESVADDMKKHV >Mature_503_residues MIGGIKMLQFLQRIGKALMLPIAVLPAAGLLLRLGQEDVFNIPVMAQAGAAIFDNLALIFAIGVAIGLSVDGSGAAGLAG AIGYLVLQNTTNALSKTYSAAELNDKLKSVQDLVGSVDPTKLADTMTKVSKAAALTPKINMAILGGIIAGVVAGLLYNKF HKIKLPEWLGFFAGKRFVPIITSIVMLLLGLVFGQIWPTIQSGIDAVAHGIVNLGSIGAGLFGLLNRLLIPIGLHHVMNT YFWFVLGDFTNAAGDIVHGDIARFFAKDPSAGMFMTGFFPVMMFGLPAACFAMIAAAKPEKRKMVTGMLGGLALTSFLTG ITEPIEFSFMFLSPVLYGIHAVLTGLSLFITTTLGIHDGFSFSAGAIDYVLNFGIATKPLLLAGIGLIYAAIYFVVFYFL IKKFDLKTPGREDEEEVAEGEEAPVAGSIGETYVAALGGKENLTVIDNCATRLRLQVKDAGQVNEAALKRAGAKGVMKLS NTSVQVIVGTNVESVADDMKKHV
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1263
COG function: function code G; Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786894, Length=507, Percent_Identity=52.2682445759369, Blast_Score=460, Evalue=1e-131, Organism=Escherichia coli, GI1787343, Length=502, Percent_Identity=43.2270916334661, Blast_Score=384, Evalue=1e-108, Organism=Escherichia coli, GI1787908, Length=538, Percent_Identity=36.4312267657993, Blast_Score=298, Evalue=6e-82,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018113 - InterPro: IPR001996 - InterPro: IPR003352 - InterPro: IPR013013 - InterPro: IPR011535 - InterPro: IPR010974 [H]
Pfam domain/function: PF00367 PTS_EIIB; PF02378 PTS_EIIC [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 53138; Mature: 53138
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: PS01035 PTS_EIIB_TYPE_1_CYS ; PS51098 PTS_EIIB_TYPE_1 ; PS51103 PTS_EIIC_TYPE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGGIKMLQFLQRIGKALMLPIAVLPAAGLLLRLGQEDVFNIPVMAQAGAAIFDNLALIF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHCCHHHHHHHHHHH AIGVAIGLSVDGSGAAGLAGAIGYLVLQNTTNALSKTYSAAELNDKLKSVQDLVGSVDPT HHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH KLADTMTKVSKAAALTPKINMAILGGIIAGVVAGLLYNKFHKIKLPEWLGFFAGKRFVPI HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHH ITSIVMLLLGLVFGQIWPTIQSGIDAVAHGIVNLGSIGAGLFGLLNRLLIPIGLHHVMNT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YFWFVLGDFTNAAGDIVHGDIARFFAKDPSAGMFMTGFFPVMMFGLPAACFAMIAAAKPE HHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHHCCHHHHHHHHHHCCCH KRKMVTGMLGGLALTSFLTGITEPIEFSFMFLSPVLYGIHAVLTGLSLFITTTLGIHDGF HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SFSAGAIDYVLNFGIATKPLLLAGIGLIYAAIYFVVFYFLIKKFDLKTPGREDEEEVAEG CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCC EEAPVAGSIGETYVAALGGKENLTVIDNCATRLRLQVKDAGQVNEAALKRAGAKGVMKLS CCCCCCCCCCHHHHHHCCCCCCCEEHHHHHHHHEEEECCCCCHHHHHHHHCCCCCEEEEC NTSVQVIVGTNVESVADDMKKHV CCEEEEEECCCHHHHHHHHHHCC >Mature Secondary Structure MIGGIKMLQFLQRIGKALMLPIAVLPAAGLLLRLGQEDVFNIPVMAQAGAAIFDNLALIF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHCCHHHHHHHHHHH AIGVAIGLSVDGSGAAGLAGAIGYLVLQNTTNALSKTYSAAELNDKLKSVQDLVGSVDPT HHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH KLADTMTKVSKAAALTPKINMAILGGIIAGVVAGLLYNKFHKIKLPEWLGFFAGKRFVPI HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHH ITSIVMLLLGLVFGQIWPTIQSGIDAVAHGIVNLGSIGAGLFGLLNRLLIPIGLHHVMNT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YFWFVLGDFTNAAGDIVHGDIARFFAKDPSAGMFMTGFFPVMMFGLPAACFAMIAAAKPE HHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHHCCHHHHHHHHHHCCCH KRKMVTGMLGGLALTSFLTGITEPIEFSFMFLSPVLYGIHAVLTGLSLFITTTLGIHDGF HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SFSAGAIDYVLNFGIATKPLLLAGIGLIYAAIYFVVFYFLIKKFDLKTPGREDEEEVAEG CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCC EEAPVAGSIGETYVAALGGKENLTVIDNCATRLRLQVKDAGQVNEAALKRAGAKGVMKLS CCCCCCCCCCHHHHHHCCCCCCCEEHHHHHHHHEEEECCCCCHHHHHHHHCCCCCEEEEC NTSVQVIVGTNVESVADDMKKHV CCEEEEEECCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9272861; 9384377 [H]