Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
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Accession | NC_008600 |
Length | 5,257,091 |
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The map label for this gene is ytaF [H]
Identifier: 118476186
GI number: 118476186
Start: 493320
End: 493931
Strand: Direct
Name: ytaF [H]
Synonym: BALH_0434
Alternate gene names: 118476186
Gene position: 493320-493931 (Clockwise)
Preceding gene: 118476183
Following gene: 118476189
Centisome position: 9.38
GC content: 34.97
Gene sequence:
>612_bases ATGAGTACGGCAGGTCTATTTTCAATTTTTTTAATTGGGATTGCTTCTAATTTAGATAATGCAGGTGTTGGGATTGCATA TGGCATTCGTAAAATCCGAATTTCGTGGTTCAACAATTTTATCATCGCATTTTTGGGGTTTTTATTTACTTTATTAGCTG GATTTTTTGGGAACTGGATTGCGTTATTTATTTCAGAGTTCACAGCAAACTTGATTGGAGCAATCGTTTTAGGGATAATT GGCGTGTTTATTTTGTGCCAGCCTTTCTTGGGGCAAAAAAATACCGTAAGCTCTAAAGATGGTAATGTACTAATGGGAAT TTTACGTGATCCAGAAAAAGCAGATTTTGATGGTTCTAAAACAATTAGTTTTTCAGAAGCAATTGTTTTAGGGGGTGCGT TGTCTATTAATAATATTGCAGGTGGATTTGATGCTGGAGTAACAAACTTGAACCTTTGGCTTACAGCAACTATTTCTGGG GTGTTTAGTTTTATTTGTATTAGTGGATTTACGTATGTAGGGAAACGATTTTTAGCAGAATACTTAGGGAAATGGGCGAC AGTTATTGCAGGATTGTTATTAATTTTTATTGGGATCGATCAGTTGTTGTAA
Upstream 100 bases:
>100_bases AAATGTTGAGCATTTATTACATGTATATGAAACAGACAGGCACAGTTGCTCAACATTTTCATAAGATGCATGGAAAAGTG AGAAAAAGGGGTGACTGTTT
Downstream 100 bases:
>100_bases GGAGAGTAGAAAACAAGGTTCGAGTATTTCCTTGGAAATACAACAAGGGATTGCATATATCGACGTACTTTTCTCCATAC TAATACGGATTTCTTTTAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 202
Protein sequence:
>203_residues MSTAGLFSIFLIGIASNLDNAGVGIAYGIRKIRISWFNNFIIAFLGFLFTLLAGFFGNWIALFISEFTANLIGAIVLGII GVFILCQPFLGQKNTVSSKDGNVLMGILRDPEKADFDGSKTISFSEAIVLGGALSINNIAGGFDAGVTNLNLWLTATISG VFSFICISGFTYVGKRFLAEYLGKWATVIAGLLLIFIGIDQLL
Sequences:
>Translated_203_residues MSTAGLFSIFLIGIASNLDNAGVGIAYGIRKIRISWFNNFIIAFLGFLFTLLAGFFGNWIALFISEFTANLIGAIVLGII GVFILCQPFLGQKNTVSSKDGNVLMGILRDPEKADFDGSKTISFSEAIVLGGALSINNIAGGFDAGVTNLNLWLTATISG VFSFICISGFTYVGKRFLAEYLGKWATVIAGLLLIFIGIDQLL >Mature_202_residues STAGLFSIFLIGIASNLDNAGVGIAYGIRKIRISWFNNFIIAFLGFLFTLLAGFFGNWIALFISEFTANLIGAIVLGIIG VFILCQPFLGQKNTVSSKDGNVLMGILRDPEKADFDGSKTISFSEAIVLGGALSINNIAGGFDAGVTNLNLWLTATISGV FSFICISGFTYVGKRFLAEYLGKWATVIAGLLLIFIGIDQLL
Specific function: Unknown
COG id: COG1971
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003810 - InterPro: IPR014205 [H]
Pfam domain/function: PF02659 DUF204 [H]
EC number: NA
Molecular weight: Translated: 21699; Mature: 21568
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTAGLFSIFLIGIASNLDNAGVGIAYGIRKIRISWFNNFIIAFLGFLFTLLAGFFGNWI CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALFISEFTANLIGAIVLGIIGVFILCQPFLGQKNTVSSKDGNVLMGILRDPEKADFDGSK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCC TISFSEAIVLGGALSINNIAGGFDAGVTNLNLWLTATISGVFSFICISGFTYVGKRFLAE EEEHHHHHHHCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLGKWATVIAGLLLIFIGIDQLL HHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure STAGLFSIFLIGIASNLDNAGVGIAYGIRKIRISWFNNFIIAFLGFLFTLLAGFFGNWI CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALFISEFTANLIGAIVLGIIGVFILCQPFLGQKNTVSSKDGNVLMGILRDPEKADFDGSK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCC TISFSEAIVLGGALSINNIAGGFDAGVTNLNLWLTATISGVFSFICISGFTYVGKRFLAE EEEHHHHHHHCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLGKWATVIAGLLLIFIGIDQLL HHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377 [H]