Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116689459

Identifier: 116689459

GI number: 116689459

Start: 1585115

End: 1586476

Strand: Direct

Name: 116689459

Synonym: Bcen2424_1437

Alternate gene names: NA

Gene position: 1585115-1586476 (Clockwise)

Preceding gene: 116689458

Following gene: 116689460

Centisome position: 45.5

GC content: 71.37

Gene sequence:

>1362_bases
GTGACGACGCGAATCACGCAGCGCACGGTGAACCTGCGCACGGCGGCGCTGCGCGCGGCCTGCGCGGTCGCGTTGGCGTT
CGCCGCGCAGCAGGCCGCGGCGCAGCCGCCCGCCGCCGCGGGCAAGACGGTCGTCTATCGCACGCAGGCCGGCGACACGC
TGTACGACGTCGCCGCGCGCTACCTGCAGGGCGCGGACGACTGGCAACTGCTCCAGCAGATCAACGGCGTGCCGGCGCCG
AAGCGCCTGCAGCCCGGCATCGCGCTGAAGCTGCCGGTCGCGCGCCTGCGCAAGGAAAAGCTCACCGCGCGCGTGATCGC
GGTGCAGGGCACGGCCGAGCGTGCGTCCGGCGCGGCTTTCGCGCCGCTCGCGAACGATGCGACGCTCGCCGAAGGCGATC
GCGTGCGCACCGGCCCGAACGGCTTCGTGACGATCGAGCTGGCCGACGGCACGCACATGAGCCTGCCGCCCGACAGCCAG
CTTGACCTGAAATCGCTGCGCCGCACGGTGCTGACCGGCACGCTCGATCGCGAGTTCGAACTCACGCGCGGCTCGGTCGA
CAGCGAAGTCACCCACCTGAAGAAACGCGACGACCGCTTCCAGATCCGCTCGCCGTCGGTCGTGGCCGGCGTGCGCGGCA
CGCGCTTTCGCGTGAACTACGACGCGGCCGGCACGGCGACGACGCGCGTCGAAGTGCTCGACGGCACCGTCGGCGTCGCG
GGCGGCCGGCAGTCGGCCGACGCGACGCTCGTGCATGCGAATTTCGGCAGCGTCGCGACGTCGTCCGGCGCGGTCGGCGC
GCCCGTCCAGCTGCTGGGCGCCCCCGCGCTCGCGCATCCCGACAAGGTGCAGGACGAGCCCGACGTCGCATTCGACGTCA
CGCCGCTCGCGCAGGCGCATGCGTATCGCGTGCAGCTCGCGCACGATGCGGGGCTGCTCGACCTGTTCCGCGAAACGCGC
ACCGATTCGCCGCGCGCGGTGTTCCGCGACGTGCCGAACGGCAACTACTTCGTGCGGATCGCCGCGATCGATGCGAACGG
CCTCGAGGGGCTGCCGCGCACCTATGCGTTCGAACGCCGCGTGATGGGGCTCGACGCGAGCGCGTCGCAGGGCGCGGGCG
GTTACGAGTTCCGCTGGTCGCCGAACGGCTCGGGCAAGAATGCGCGTTACCGGTTCGTGTTGTCGCGCTCGAAGGACCTG
AGCGCGCCGGTCGTCGACCAAGTCGGCCTGCACGCGCGCCAGATCACCGTCGCGCACCTGCCGCCGGGCGACTATTTCTG
GGCCGTGACCGTCGAGGAATTCGAAGGCGGCAAGTTCTACGAGAAGACCAGTCCGGTCAGCGCGTTCACGTTGTCGCGCT
GA

Upstream 100 bases:

>100_bases
TGCGCACGAAGCTCGGCCTGCGGCCCGAGAACGGCTACCGTCTCGCGCCGATCTACGGGTACGGCTACCGGCTCGAACGG
GTCGGCCAGGGGGAACCGGA

Downstream 100 bases:

>100_bases
TCCGCGGCGCATGAAACCCGACTCCGTTTCTCCGCGGCGGCACCTCGGCCGCCGCTTCCTGATCGAATGGATCGCGATCG
GCTGCCTCGGGATCGCGGTG

Product: peptidoglycan-binding LysM

Products: NA

Alternate protein names: FecR Protein; LysM Cell Wall-Like Protein; LysM Domain-Containing; LysM Motif-Containing Protein; LysM Domain Protein

Number of amino acids: Translated: 453; Mature: 452

Protein sequence:

>453_residues
MTTRITQRTVNLRTAALRAACAVALAFAAQQAAAQPPAAAGKTVVYRTQAGDTLYDVAARYLQGADDWQLLQQINGVPAP
KRLQPGIALKLPVARLRKEKLTARVIAVQGTAERASGAAFAPLANDATLAEGDRVRTGPNGFVTIELADGTHMSLPPDSQ
LDLKSLRRTVLTGTLDREFELTRGSVDSEVTHLKKRDDRFQIRSPSVVAGVRGTRFRVNYDAAGTATTRVEVLDGTVGVA
GGRQSADATLVHANFGSVATSSGAVGAPVQLLGAPALAHPDKVQDEPDVAFDVTPLAQAHAYRVQLAHDAGLLDLFRETR
TDSPRAVFRDVPNGNYFVRIAAIDANGLEGLPRTYAFERRVMGLDASASQGAGGYEFRWSPNGSGKNARYRFVLSRSKDL
SAPVVDQVGLHARQITVAHLPPGDYFWAVTVEEFEGGKFYEKTSPVSAFTLSR

Sequences:

>Translated_453_residues
MTTRITQRTVNLRTAALRAACAVALAFAAQQAAAQPPAAAGKTVVYRTQAGDTLYDVAARYLQGADDWQLLQQINGVPAP
KRLQPGIALKLPVARLRKEKLTARVIAVQGTAERASGAAFAPLANDATLAEGDRVRTGPNGFVTIELADGTHMSLPPDSQ
LDLKSLRRTVLTGTLDREFELTRGSVDSEVTHLKKRDDRFQIRSPSVVAGVRGTRFRVNYDAAGTATTRVEVLDGTVGVA
GGRQSADATLVHANFGSVATSSGAVGAPVQLLGAPALAHPDKVQDEPDVAFDVTPLAQAHAYRVQLAHDAGLLDLFRETR
TDSPRAVFRDVPNGNYFVRIAAIDANGLEGLPRTYAFERRVMGLDASASQGAGGYEFRWSPNGSGKNARYRFVLSRSKDL
SAPVVDQVGLHARQITVAHLPPGDYFWAVTVEEFEGGKFYEKTSPVSAFTLSR
>Mature_452_residues
TTRITQRTVNLRTAALRAACAVALAFAAQQAAAQPPAAAGKTVVYRTQAGDTLYDVAARYLQGADDWQLLQQINGVPAPK
RLQPGIALKLPVARLRKEKLTARVIAVQGTAERASGAAFAPLANDATLAEGDRVRTGPNGFVTIELADGTHMSLPPDSQL
DLKSLRRTVLTGTLDREFELTRGSVDSEVTHLKKRDDRFQIRSPSVVAGVRGTRFRVNYDAAGTATTRVEVLDGTVGVAG
GRQSADATLVHANFGSVATSSGAVGAPVQLLGAPALAHPDKVQDEPDVAFDVTPLAQAHAYRVQLAHDAGLLDLFRETRT
DSPRAVFRDVPNGNYFVRIAAIDANGLEGLPRTYAFERRVMGLDASASQGAGGYEFRWSPNGSGKNARYRFVLSRSKDLS
APVVDQVGLHARQITVAHLPPGDYFWAVTVEEFEGGKFYEKTSPVSAFTLSR

Specific function: Unknown

COG id: COG4254

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48530; Mature: 48399

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTRITQRTVNLRTAALRAACAVALAFAAQQAAAQPPAAAGKTVVYRTQAGDTLYDVAAR
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHH
YLQGADDWQLLQQINGVPAPKRLQPGIALKLPVARLRKEKLTARVIAVQGTAERASGAAF
HHCCCCHHHHHHHHCCCCCCHHCCCCCEEECCHHHHHHHCCEEEEEEEECCHHHCCCCEE
APLANDATLAEGDRVRTGPNGFVTIELADGTHMSLPPDSQLDLKSLRRTVLTGTLDREFE
CCCCCCCEECCCCCEEECCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEE
LTRGSVDSEVTHLKKRDDRFQIRSPSVVAGVRGTRFRVNYDAAGTATTRVEVLDGTVGVA
ECCCCCCHHHHHHHHCCCCEEECCCCEEECCCCCEEEEEECCCCCCEEEEEEECCEEECC
GGRQSADATLVHANFGSVATSSGAVGAPVQLLGAPALAHPDKVQDEPDVAFDVTPLAQAH
CCCCCCCEEEEEECCCCEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEEECCHHCCC
AYRVQLAHDAGLLDLFRETRTDSPRAVFRDVPNGNYFVRIAAIDANGLEGLPRTYAFERR
EEEEEEECCCCHHHHHHHHCCCCCHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHHHHHH
VMGLDASASQGAGGYEFRWSPNGSGKNARYRFVLSRSKDLSAPVVDQVGLHARQITVAHL
EECCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCHHHHHCCCEEEEEEEEC
PPGDYFWAVTVEEFEGGKFYEKTSPVSAFTLSR
CCCCEEEEEEEEECCCCEEEECCCCCCEEEECC
>Mature Secondary Structure 
TTRITQRTVNLRTAALRAACAVALAFAAQQAAAQPPAAAGKTVVYRTQAGDTLYDVAAR
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHH
YLQGADDWQLLQQINGVPAPKRLQPGIALKLPVARLRKEKLTARVIAVQGTAERASGAAF
HHCCCCHHHHHHHHCCCCCCHHCCCCCEEECCHHHHHHHCCEEEEEEEECCHHHCCCCEE
APLANDATLAEGDRVRTGPNGFVTIELADGTHMSLPPDSQLDLKSLRRTVLTGTLDREFE
CCCCCCCEECCCCCEEECCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEE
LTRGSVDSEVTHLKKRDDRFQIRSPSVVAGVRGTRFRVNYDAAGTATTRVEVLDGTVGVA
ECCCCCCHHHHHHHHCCCCEEECCCCEEECCCCCEEEEEECCCCCCEEEEEEECCEEECC
GGRQSADATLVHANFGSVATSSGAVGAPVQLLGAPALAHPDKVQDEPDVAFDVTPLAQAH
CCCCCCCEEEEEECCCCEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEEECCHHCCC
AYRVQLAHDAGLLDLFRETRTDSPRAVFRDVPNGNYFVRIAAIDANGLEGLPRTYAFERR
EEEEEEECCCCHHHHHHHHCCCCCHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHHHHHH
VMGLDASASQGAGGYEFRWSPNGSGKNARYRFVLSRSKDLSAPVVDQVGLHARQITVAHL
EECCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCHHHHHCCCEEEEEEEEC
PPGDYFWAVTVEEFEGGKFYEKTSPVSAFTLSR
CCCCEEEEEEEEECCCCEEEECCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA