Definition | Buchnera aphidicola str. Cc (Cinara cedri), complete genome. |
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Accession | NC_008513 |
Length | 416,380 |
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The map label for this gene is hisI [H]
Identifier: 116515012
GI number: 116515012
Start: 76640
End: 77257
Strand: Direct
Name: hisI [H]
Synonym: BCc_070
Alternate gene names: 116515012
Gene position: 76640-77257 (Clockwise)
Preceding gene: 116515011
Following gene: 116515013
Centisome position: 18.41
GC content: 20.87
Gene sequence:
>618_bases ATGTTAATTGATCAAAATTTACAAAATTTAAATTGGACAAAAAATAATGGTTTAATTCCTGCTATTGCGCAACATTATAT TTCTGGAGAAATATTGATGTTCGGTTATATGAATCAAAAAGCATTCGATAAAATGATTAGTAACAAATTGTTTACTTTAT ATTCTAGAAAAAAAAAAAGAATTTGGATTAAAGGAGAAACTTCTAAAAATTTTTTATATGTTAAAAATATTAGTACTGAT TGTGATACAGACGTTATTCTTGTAAAAGTTAATCCTGCAGGAAATACATGTCATTTAAATCGATTTAGTTGTTTTGAATC TTCGCATCAATTACCATATACATTTTTATATAAATTAGAAAATAGAATTAGAAATAAAAAAGAGAATTTTTCTCGTTCTT CTTATGTATCTAATTTATTTTCTTCTGGAAATAATAGAATTGCTCAAAAAATTGGAGAAGAATCTGTTGAAGTGATTATA GCATTTTTAGAAAATAATCATGTTAATATAATTAATGAAACATCTGATTTAATATTTCATTTATTTATTTTATTACAATC TATGAATATTAATTTATATAAAATTATTAAAAATTTACAAAAACGTGTTAAAAAATAA
Upstream 100 bases:
>100_bases AAGTTGATGGTGCTTTAGCTGCTTCTGTTTTTCATAAAAATATTATTTCTATTTCAAATTTAAAAAATTTTTTGTTTAAT CACGGAATTAGGGTAAGAGT
Downstream 100 bases:
>100_bases TATTTTATAAATTTTAATTAAATTTTTATTTATAAATAATATTTTTTTTTATAAGAGGTTATACATGAAAAATAAAGATA TTGGAATTATTGGAATGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphoribosyl-AMP cyclohydrolase; PRA-CH; Phosphoribosyl-ATP pyrophosphatase; PRA-PH [H]
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MLIDQNLQNLNWTKNNGLIPAIAQHYISGEILMFGYMNQKAFDKMISNKLFTLYSRKKKRIWIKGETSKNFLYVKNISTD CDTDVILVKVNPAGNTCHLNRFSCFESSHQLPYTFLYKLENRIRNKKENFSRSSYVSNLFSSGNNRIAQKIGEESVEVII AFLENNHVNIINETSDLIFHLFILLQSMNINLYKIIKNLQKRVKK
Sequences:
>Translated_205_residues MLIDQNLQNLNWTKNNGLIPAIAQHYISGEILMFGYMNQKAFDKMISNKLFTLYSRKKKRIWIKGETSKNFLYVKNISTD CDTDVILVKVNPAGNTCHLNRFSCFESSHQLPYTFLYKLENRIRNKKENFSRSSYVSNLFSSGNNRIAQKIGEESVEVII AFLENNHVNIINETSDLIFHLFILLQSMNINLYKIIKNLQKRVKK >Mature_205_residues MLIDQNLQNLNWTKNNGLIPAIAQHYISGEILMFGYMNQKAFDKMISNKLFTLYSRKKKRIWIKGETSKNFLYVKNISTD CDTDVILVKVNPAGNTCHLNRFSCFESSHQLPYTFLYKLENRIRNKKENFSRSSYVSNLFSSGNNRIAQKIGEESVEVII AFLENNHVNIINETSDLIFHLFILLQSMNINLYKIIKNLQKRVKK
Specific function: Histidine biosynthesis; second step. Histidine biosynthesis; third step. [C]
COG id: COG0139
COG function: function code E; Phosphoribosyl-AMP cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PRA-PH family [H]
Homologues:
Organism=Escherichia coli, GI2367128, Length=203, Percent_Identity=46.7980295566502, Blast_Score=212, Evalue=2e-56, Organism=Saccharomyces cerevisiae, GI6319819, Length=170, Percent_Identity=31.1764705882353, Blast_Score=66, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023019 - InterPro: IPR008179 - InterPro: IPR021130 - InterPro: IPR002496 - ProDom: PD002610 [H]
Pfam domain/function: PF01502 PRA-CH; PF01503 PRA-PH [H]
EC number: =3.5.4.19; =3.6.1.31 [H]
Molecular weight: Translated: 23950; Mature: 23950
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIDQNLQNLNWTKNNGLIPAIAQHYISGEILMFGYMNQKAFDKMISNKLFTLYSRKKKR CCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCE IWIKGETSKNFLYVKNISTDCDTDVILVKVNPAGNTCHLNRFSCFESSHQLPYTFLYKLE EEEEECCCCCEEEEEECCCCCCCCEEEEEECCCCCEEECCHHHHHCCCCCCCHHHHHHHH NRIRNKKENFSRSSYVSNLFSSGNNRIAQKIGEESVEVIIAFLENNHVNIINETSDLIFH HHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHCHHHHHHEEEEECCCCEEEEECHHHHHHH LFILLQSMNINLYKIIKNLQKRVKK HHHHHHHCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MLIDQNLQNLNWTKNNGLIPAIAQHYISGEILMFGYMNQKAFDKMISNKLFTLYSRKKKR CCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCE IWIKGETSKNFLYVKNISTDCDTDVILVKVNPAGNTCHLNRFSCFESSHQLPYTFLYKLE EEEEECCCCCEEEEEECCCCCCCCEEEEEECCCCCEEECCHHHHHCCCCCCCHHHHHHHH NRIRNKKENFSRSSYVSNLFSSGNNRIAQKIGEESVEVIIAFLENNHVNIINETSDLIFH HHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHCHHHHHHEEEEECCCCEEEEECHHHHHHH LFILLQSMNINLYKIIKNLQKRVKK HHHHHHHCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9370271 [H]