| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is manX [C]
Identifier: 116494116
GI number: 116494116
Start: 551921
End: 552415
Strand: Direct
Name: manX [C]
Synonym: LSEI_0560
Alternate gene names: 116494116
Gene position: 551921-552415 (Clockwise)
Preceding gene: 116494115
Following gene: 116494117
Centisome position: 19.06
GC content: 44.65
Gene sequence:
>495_bases ATGGCAATTTCGTTTGTACGTATTGATGATCGCATGATTCATGGCTTGATCACGGTTCGTTGGGGCAAGGAATACCCGAT GGATGGGATTATTGCGGTAAACGACAAAGCGGCAAACAATCCGATTTTGAAGGAAGCCTATATGGCAGCGTCTGACAAGA AGACCTTCGTTTGGACGTTAGATCATTTTGACAAGGTTAAGGATAAGGTGTTGAACTCAGCAACCAAGTATTTTCTCATC ACCAAGAGTCCTCAAGATATGAAAAAGATCTTGGTCGATATGAACTTCAAGCCGGGCGACATTAAAACAGTTGTTGTCGG TCCAGGTAATGATCGCGACAACGCGGTCAAACTCGGAGACAATCAGTCCTTTACCCAAGAGGAAGGCGATGCCTTTGAAG CGATTGAGAAGGCTGGTTATAAAGTTGAGTTTGCGCTGTTGCCAGATCAGCGGATTGGTAGTTGGGACAAATTCAAGTCA CGCTTTGGGTATTAA
Upstream 100 bases:
>100_bases AAAAGAAAAAGCATTTTCAGAAGCAACCGCGGCCATCAAAGAATTTCAGACGACCTCATCAGAAGCTTCTGACGATGACG ATATTTAAGGAGTGAGCAAA
Downstream 100 bases:
>100_bases TGGTTGAACAATAACGCGCTCGCAAAAAAGGAAGGTAAGAAAAATGACAATTAGTTGGTTTCAAGCAGCTATTTTAGGTG TTTTCGCTTGCTTATGTTCC
Product: phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB
Products: Protein Histidine; Sugar Phosphate.; D-glucosamine-6-phosphate [Cytoplasm]; pyruvate; glucose-6-phosphate [Cytoplasm]; N-acetyl-D-glucosamine-6-phosphate [Cytoplasm]; mannose-6-phosphate [Cytoplasm]; fructose-6-phosphate [Cytoplasm] [C]
Alternate protein names: PTS System Protein; PTS System Fructose(Mannose)-Specific IIB; PTS System Mannose-Specific IIB Component; PTS System Sorbose Subfamily Transporter Subunit IIB; Pts System Mannose-Specific Eiiab Component; PTS System Fructose/Mannose-Specific IIB Component; Phosphotransferase System PTS; PTS System; LevB Protein
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MAISFVRIDDRMIHGLITVRWGKEYPMDGIIAVNDKAANNPILKEAYMAASDKKTFVWTLDHFDKVKDKVLNSATKYFLI TKSPQDMKKILVDMNFKPGDIKTVVVGPGNDRDNAVKLGDNQSFTQEEGDAFEAIEKAGYKVEFALLPDQRIGSWDKFKS RFGY
Sequences:
>Translated_164_residues MAISFVRIDDRMIHGLITVRWGKEYPMDGIIAVNDKAANNPILKEAYMAASDKKTFVWTLDHFDKVKDKVLNSATKYFLI TKSPQDMKKILVDMNFKPGDIKTVVVGPGNDRDNAVKLGDNQSFTQEEGDAFEAIEKAGYKVEFALLPDQRIGSWDKFKS RFGY >Mature_163_residues AISFVRIDDRMIHGLITVRWGKEYPMDGIIAVNDKAANNPILKEAYMAASDKKTFVWTLDHFDKVKDKVLNSATKYFLIT KSPQDMKKILVDMNFKPGDIKTVVVGPGNDRDNAVKLGDNQSFTQEEGDAFEAIEKAGYKVEFALLPDQRIGSWDKFKSR FGY
Specific function: This Is A Component Of The Phosphoenolpyruvate-Dependent Sugar Phosphotransferase System (Pts), A Major Carbohydrate Active -Transport System. The IIcd Domains Contain The Sugar Binding Site And The Transmembrane Channel; The IIa Domain Contains The Prim
COG id: COG3444
COG function: function code G; Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 220 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2880 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 260 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.1.69 [C]
Molecular weight: Translated: 18602; Mature: 18470
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: PS51101 PTS_EIIB_TYPE_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAISFVRIDDRMIHGLITVRWGKEYPMDGIIAVNDKAANNPILKEAYMAASDKKTFVWTL CEEEEEEECCCEEEEEEEEEECCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCCEEEEEH DHFDKVKDKVLNSATKYFLITKSPQDMKKILVDMNFKPGDIKTVVVGPGNDRDNAVKLGD HHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEECC NQSFTQEEGDAFEAIEKAGYKVEFALLPDQRIGSWDKFKSRFGY CCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHCCC >Mature Secondary Structure AISFVRIDDRMIHGLITVRWGKEYPMDGIIAVNDKAANNPILKEAYMAASDKKTFVWTL EEEEEEECCCEEEEEEEEEECCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCCEEEEEH DHFDKVKDKVLNSATKYFLITKSPQDMKKILVDMNFKPGDIKTVVVGPGNDRDNAVKLGD HHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEECC NQSFTQEEGDAFEAIEKAGYKVEFALLPDQRIGSWDKFKSRFGY CCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Protein N-Phosphohistidine; Sugar; phosphoenolpyruvate; glucosamine [Periplasm]; phosphoenolpyruvate; beta-D-glucose [Periplasm]; N-acetyl-D-glucosamine [Periplasm]; mannose [Periplasm]; fructose [Periplasm] [C]
Specific reaction: Protein N-Phosphohistidine + Sugar = Protein Histidine + Sugar Phosphate. phosphoenolpyruvate + glucosamine [Periplasm] = D-glucosamine-6-phosphate [Cytoplasm] + pyruvate phosphoenolpyruvate + beta-D-glucose [Periplasm] = glucose-6-phosphate [Cytoplasm]
General reaction: Transferring phosphorus-containing groups; Phosphotransferases with an alcohol group as acceptor [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA