Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116492887

Identifier: 116492887

GI number: 116492887

Start: 1124805

End: 1125068

Strand: Reverse

Name: 116492887

Synonym: PEPE_1125

Alternate gene names: NA

Gene position: 1125068-1124805 (Counterclockwise)

Preceding gene: 116492889

Following gene: 116492886

Centisome position: 61.4

GC content: 32.2

Gene sequence:

>264_bases
ATGATGACGCCAGGAAGTGTTTATGTTTTTAAATTTGGCAAAGATGAACTTAATAATCGAGCAATTATTAATTACACCCA
TACATGGACGGGTCGAATTAAAATTACTGAGATTGATTTACGTCTGCATGAACAAAAGCATCCTCGTATCTTTCGTCGAG
AAAGTGATTTATTAGCTTATTTAAAGAAACATCTAACGGAAACTGATGGAGTTACTAACATAACACGCCGTAAAAAACAT
CATTCCAAAAAAATAAAAAAGTAA

Upstream 100 bases:

>100_bases
TTAAAAGAAAAATTAGTCGAGGTGATCAACAATTCTAAAGAAAACAAAACAATTTTTGAGAAGCAATAATCTACAATATA
GTAAGAAATATATCCGGCCG

Downstream 100 bases:

>100_bases
ATTGACTATTGACGCCATTAAGTTTTATGCGTAGTATAGTCAATTAAAGAAAAGAAACCTTAATTTGGTCCTGTGAGGCC
AAAAGGCTCAATTTGTTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MMTPGSVYVFKFGKDELNNRAIINYTHTWTGRIKITEIDLRLHEQKHPRIFRRESDLLAYLKKHLTETDGVTNITRRKKH
HSKKIKK

Sequences:

>Translated_87_residues
MMTPGSVYVFKFGKDELNNRAIINYTHTWTGRIKITEIDLRLHEQKHPRIFRRESDLLAYLKKHLTETDGVTNITRRKKH
HSKKIKK
>Mature_87_residues
MMTPGSVYVFKFGKDELNNRAIINYTHTWTGRIKITEIDLRLHEQKHPRIFRRESDLLAYLKKHLTETDGVTNITRRKKH
HSKKIKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10429; Mature: 10429

Theoretical pI: Translated: 10.97; Mature: 10.97

Prosite motif: PS00591 GLYCOSYL_HYDROL_F10

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTPGSVYVFKFGKDELNNRAIINYTHTWTGRIKITEIDLRLHEQKHPRIFRRESDLLAY
CCCCCCEEEEEECCCCCCCCEEEEEECEEECEEEEEEEEEEECCCCCCCEECCHHHHHHH
LKKHLTETDGVTNITRRKKHHSKKIKK
HHHHCCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MMTPGSVYVFKFGKDELNNRAIINYTHTWTGRIKITEIDLRLHEQKHPRIFRRESDLLAY
CCCCCCEEEEEECCCCCCCCEEEEEECEEECEEEEEEEEEEECCCCCCCEECCHHHHHHH
LKKHLTETDGVTNITRRKKHHSKKIKK
HHHHCCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA