| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is surA [H]
Identifier: 114797858
GI number: 114797858
Start: 2238936
End: 2240183
Strand: Direct
Name: surA [H]
Synonym: HNE_2150
Alternate gene names: 114797858
Gene position: 2238936-2240183 (Clockwise)
Preceding gene: 114798255
Following gene: 114798861
Centisome position: 60.43
GC content: 61.94
Gene sequence:
>1248_bases ATGGTACGTGTGGTGTTCTTGGCAGCAGCTTTTGCCGCGATCAGCGTGTTCGGCGCGCCCGTTTCGCCCGCCAGCGCGCA GGAAGCGGACCGGCAAACGCTTGAGGGCATCGCCGCTATCGTTAATGACAAGCCGATCTCCTACTCGGACGTTCGCCAGC GCGCGCGCCTCCTCCTTCTGACGATTGGCGCGTCGCAGCCGACTCAGGAACAGGTTCAGCAGATCACCGGCCAGGCGCTT GAGCAGCTGATCGACGAAAAACTGCAGCTCGACCGCGTGTCCGAATTCGAGGTTGAGGTTGATCCTGTCGAAATTGACGC CGCGGTTCAGAATATGGCGAGCGAGGCGGGCGTGACCGGCGAGGTTCTCCGCGAGCAGCTGACCTCCTCGGGTGTAAACC CGGCCAGCCTTGAAGAGCAGATGCGCGCTGAAATCGCCTGGAACCGCCTGATGAGCGGGCTTTACGGAAACCGTATCCGC ATTTCAGAGAATCAGGTCGACGATCAGATGTCGCGTCTGCGCACGGCATCTCAGAAGACCCAATACCGGATTGGCGAGAT TTTCCTGTACGCTCCGGACGAAGCCACCAAAACCGAAGCGCTGACGGCCGCTGAGTCCATCATCAGCCAGCTTCAGCAGG GCGCCGACTTCCGCGTTGCCGCCCAACGTATCTCCTCTGCGCCGACAGCGGCCGCAGGCGGCGACATGGGCTGGGTTACG ATCGAGGATATTGATCCGACCATCGCCGAGGCCGTGAGGAATAGCTCCGGCAATGGTCTGCTGGAGCCGATCCAGACCGA GAATGGCATTTACATCATCCTGCTCGGTGGCAAGCGCGAACCGGCGGAACCGGTTACCCGCGTGGATCTGAAGCGCCTCG TTGCCGCTGACGGCGTCGAAGCGACCCTCACCGAGGCAATCGGCCGTATCAACAGCTGCGATGACGTCCAGTCTGTTGCC AACACGAACTCCGGCCTGCGCGCGCAGGACATTGCAGACATCAATGTCGATGAACTCGGCCCCGAAGGCCGCAGCCTCGT CCTCGCGACCGATGTCGGCCAGCCGACTGAAATCTTCGCGGTCAGCTCTGGCCTTGCGGTCATGTATGTCTGCCGCCGTC AGGATGGCGCCGAAGCGCTGCCCTCGCGCGAAGACCTCAAAGGCTCCCTCAAGTCGCGGGAGTTGAACATGATCTCCGAG CGGGAACTGCGCAATGCTCGCCGCCTGGCGACCATCATCTACCGCTAG
Upstream 100 bases:
>100_bases GTGACTGTAGCGGCACGTTGCACGATGAAACGAGACTTGTAAGGTCCGGAAGCGAAAAACAGGCTTGTTCCCGACCCTCG GGGAGCCATGGAGACGTCGT
Downstream 100 bases:
>100_bases GACAGGCGATTCCGCTTGATCCGCTGCGCGATTGGCGCGACACCCCCGCGCGTGACCTCGCCTTCCCTCCTTCCTCTGGC CCTAACCATGGGCGACCCTG
Product: peptidyl-prolyl cis-trans isomerase domain-containing protein
Products: NA
Alternate protein names: Peptidyl-prolyl cis-trans isomerase surA; PPIase surA; Rotamase surA [H]
Number of amino acids: Translated: 415; Mature: 415
Protein sequence:
>415_residues MVRVVFLAAAFAAISVFGAPVSPASAQEADRQTLEGIAAIVNDKPISYSDVRQRARLLLLTIGASQPTQEQVQQITGQAL EQLIDEKLQLDRVSEFEVEVDPVEIDAAVQNMASEAGVTGEVLREQLTSSGVNPASLEEQMRAEIAWNRLMSGLYGNRIR ISENQVDDQMSRLRTASQKTQYRIGEIFLYAPDEATKTEALTAAESIISQLQQGADFRVAAQRISSAPTAAAGGDMGWVT IEDIDPTIAEAVRNSSGNGLLEPIQTENGIYIILLGGKREPAEPVTRVDLKRLVAADGVEATLTEAIGRINSCDDVQSVA NTNSGLRAQDIADINVDELGPEGRSLVLATDVGQPTEIFAVSSGLAVMYVCRRQDGAEALPSREDLKGSLKSRELNMISE RELRNARRLATIIYR
Sequences:
>Translated_415_residues MVRVVFLAAAFAAISVFGAPVSPASAQEADRQTLEGIAAIVNDKPISYSDVRQRARLLLLTIGASQPTQEQVQQITGQAL EQLIDEKLQLDRVSEFEVEVDPVEIDAAVQNMASEAGVTGEVLREQLTSSGVNPASLEEQMRAEIAWNRLMSGLYGNRIR ISENQVDDQMSRLRTASQKTQYRIGEIFLYAPDEATKTEALTAAESIISQLQQGADFRVAAQRISSAPTAAAGGDMGWVT IEDIDPTIAEAVRNSSGNGLLEPIQTENGIYIILLGGKREPAEPVTRVDLKRLVAADGVEATLTEAIGRINSCDDVQSVA NTNSGLRAQDIADINVDELGPEGRSLVLATDVGQPTEIFAVSSGLAVMYVCRRQDGAEALPSREDLKGSLKSRELNMISE RELRNARRLATIIYR >Mature_415_residues MVRVVFLAAAFAAISVFGAPVSPASAQEADRQTLEGIAAIVNDKPISYSDVRQRARLLLLTIGASQPTQEQVQQITGQAL EQLIDEKLQLDRVSEFEVEVDPVEIDAAVQNMASEAGVTGEVLREQLTSSGVNPASLEEQMRAEIAWNRLMSGLYGNRIR ISENQVDDQMSRLRTASQKTQYRIGEIFLYAPDEATKTEALTAAESIISQLQQGADFRVAAQRISSAPTAAAGGDMGWVT IEDIDPTIAEAVRNSSGNGLLEPIQTENGIYIILLGGKREPAEPVTRVDLKRLVAADGVEATLTEAIGRINSCDDVQSVA NTNSGLRAQDIADINVDELGPEGRSLVLATDVGQPTEIFAVSSGLAVMYVCRRQDGAEALPSREDLKGSLKSRELNMISE RELRNARRLATIIYR
Specific function: Chaperone involved in the correct folding and assembly of outer membrane proteins. It recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act
COG id: COG0760
COG function: function code O; Parvulin-like peptidyl-prolyl isomerase
Gene ontology:
Cell location: Periplasm. Note=Is capable of associating with the outer membrane (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PpiC domains [H]
Homologues:
Organism=Escherichia coli, GI1786238, Length=202, Percent_Identity=26.2376237623762, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: 400 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000297 - InterPro: IPR023058 - InterPro: IPR023034 - InterPro: IPR015391 - InterPro: IPR008880 [H]
Pfam domain/function: PF00639 Rotamase; PF09312 SurA_N [H]
EC number: =5.2.1.8 [H]
Molecular weight: Translated: 44894; Mature: 44894
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: PS50198 PPIC_PPIASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRVVFLAAAFAAISVFGAPVSPASAQEADRQTLEGIAAIVNDKPISYSDVRQRARLLLL CEEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEEEEE TIGASQPTQEQVQQITGQALEQLIDEKLQLDRVSEFEVEVDPVEIDAAVQNMASEAGVTG EECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHCCCCH EVLREQLTSSGVNPASLEEQMRAEIAWNRLMSGLYGNRIRISENQVDDQMSRLRTASQKT HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHH QYRIGEIFLYAPDEATKTEALTAAESIISQLQQGADFRVAAQRISSAPTAAAGGDMGWVT HEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCEEE IEDIDPTIAEAVRNSSGNGLLEPIQTENGIYIILLGGKREPAEPVTRVDLKRLVAADGVE EECCCHHHHHHHHCCCCCCCCCCEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCH ATLTEAIGRINSCDDVQSVANTNSGLRAQDIADINVDELGPEGRSLVLATDVGQPTEIFA HHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCCCCEEEE VSSGLAVMYVCRRQDGAEALPSREDLKGSLKSRELNMISERELRNARRLATIIYR ECCCCEEEEEECCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVRVVFLAAAFAAISVFGAPVSPASAQEADRQTLEGIAAIVNDKPISYSDVRQRARLLLL CEEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEEEEE TIGASQPTQEQVQQITGQALEQLIDEKLQLDRVSEFEVEVDPVEIDAAVQNMASEAGVTG EECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHCCCCH EVLREQLTSSGVNPASLEEQMRAEIAWNRLMSGLYGNRIRISENQVDDQMSRLRTASQKT HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHH QYRIGEIFLYAPDEATKTEALTAAESIISQLQQGADFRVAAQRISSAPTAAAGGDMGWVT HEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCEEE IEDIDPTIAEAVRNSSGNGLLEPIQTENGIYIILLGGKREPAEPVTRVDLKRLVAADGVE EECCCHHHHHHHHCCCCCCCCCCEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCH ATLTEAIGRINSCDDVQSVANTNSGLRAQDIADINVDELGPEGRSLVLATDVGQPTEIFA HHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCCCCEEEE VSSGLAVMYVCRRQDGAEALPSREDLKGSLKSRELNMISERELRNARRLATIIYR ECCCCEEEEEECCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA