Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
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Accession | NC_008358 |
Length | 3,705,021 |
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The map label for this gene is 114797105
Identifier: 114797105
GI number: 114797105
Start: 212878
End: 215022
Strand: Direct
Name: 114797105
Synonym: HNE_0221
Alternate gene names: NA
Gene position: 212878-215022 (Clockwise)
Preceding gene: 114799872
Following gene: 114798541
Centisome position: 5.75
GC content: 59.35
Gene sequence:
>2145_bases ATGAGACATATCAGGCTGTTTGCGGCGGCATTTCTTGTCGCGGCCCAGGTCGGGCTTGCGGCATGCGCCAGTGACGCAGG TATGGCGCTCGCGCCGCCCGAAGAGGCAGCGCCGCCGGCGGCGGAAGCCGAAATCCTTTGGGACACGTATGGCGTTCCCC ACATTTATGGTCCGGATGCGGAATCAGTTTTCTATGGATATGGCTGGGCTCAGGTCGCCAGCCACGCCAACACGGTGCTC CGGCTCTATGGAGAAGCGCGTGGCAAGGGTGCCGAGTATTGGGGCGCGGAGTATGAAGAGACCACCAAATGGCTGGTCAA GAATGATGTGCCGGGCAGGGCTCAGCTTTGGTATGATGCCTACTCGCCAGAGTTCCGCGCCAAGCTTGATGCGTTTGCGG AGGGCATGAATGCCTATGCTGCGGCCAATCCCGAGGCCATTGATCCGGAGCTGCGCGTCGTGCTGCCCGTCAGCGGCGTG GATGTTGTCGCGCATGCGCACCGCCTGATGAATTTTGTCTATGTGGCGTCTCCCGGCCGCGTGGCAGGGGAGGGCGATCC GCCTGACCTCTCCGAACAGGGGTCGAATACATGGGCGATTTCCGGTTCGAAAACGGCATCCGGCAATACGATGCTGTTGC AGAACCCGCACCTGCCCTGGGGCACGGGCTATTTCATTTATTATGAGGCGCACCTCAACGGCCCGGACTTTGAAATCTAT GGCGCCACACAGATCGGCCTGCCGGTGATCCGGTTTGCTTTCAATCAGCAGATGGGTATTTCCAACACCGTGAACGGCAT GGTGGGCGCAACGACCTATGAGCTGACGCTGAAGGACAATGGCTACCTCTTTGACGGCGAAGTTTTGCCTTTTGATGTCC GTGAGACGTCCTACAAGCTGCGCCAGGATGACGGCACCCTGCTGGACGTGCCGGTGTCTGTGCGGTCGACCGTACACGGG CCCGTGTTTGAAAAGGCAGATGGCAAGACCATCGCGCTGCGGGTTGCAGGGCTCGATCGCGGTGGAATGCTGGAGCAGTA TTTCGACATGGTCACGTCCGACAGCCATGAAGAATTCCAGTCTGCCATGAGCCGTCTGCAGGTGCCGACGTTCAATATTT CCTATGCCGACCGGGACGGGCATATCGAGTATATTTTCAATGGCATCGCGCCCAAACGCCCTTCAGGCGATATTGCCTTC TGGCAGGGGCTCGTGCCCGGAGACACGTCTGAATATCTGTGGACCGACATTCATTCGTTTGAAGATCTGCCGCGGGTAAC AGATCCGGAAACCGGCTTCATTCAGAACTCCAATGACCCGCCTTGGGAGGCGACCTATCCGGTCGCTTACAAGCCTGAGG ACTACCCAGCCTACTTTGCGCCGCGCACACCGCTTTCCATGCGGGCGCAGGAGTCGATCCGCATGATGACAGAAGCGGAA GACCTGACGCTGGACGAACTTGTAACGTTGAAGCTCTCCGCCAATGCGCTGATGGCAGACCGGGTGCTGCCCGATCTGCT GGCTGCGGCGGCGAGTGATCCAGATTCGGATATGCAGGCAGCGGTGAAAGTGCTGTCCGAATGGGATCGCACATTCTCCA GCGAAAATCGCGCCGGGGTCCTGTTTGAGGAATGGGGCAAGCTGTTTGCTGGCCCGCGCATGACCGGTCAGTCCGGATTT GCCGTGCCCTGGTCGGCAGATGATCCGATCAATACGCCCTCCGGCTTGAAAGATCCGGCGGCCTCTGTCGAGCTTCTTCG TCAGGCCATCGCCTCGACCAAGGAGAAGTATGGTCAGATCGATCCGGTCTATGGAGATGTGTCGCGCTTCATCCTTGAAG ATGTGGATGTGCCGGGGCTCGGCGGATACGGGAACCTGGGCGCGTTCCATGTGATTACCTGGTCGGACCCGAATGCAGAC GGCGTGCGCACGCCTAACCATGGCGAGACCTGGGTGGCGATGATCGAGTTTTCCACGCCGGTAAAGGCTTATGGCCTCAT GAGCTATGGGAACTCCCGGCAGCCCGGCACGAGCCACTACAGCGATCAGCTCAACATGCTGTCAGAGGAAAAGTACCGCG AACTCTGGCTGCAACGCGAGCAGGTGGAAGCCAACCTGGCAGAGCGCACTCCGCTCAACCGATAG
Upstream 100 bases:
>100_bases ATATAAGTGGTGATCTGACAGGGCTGGCCCGGTGGCGAGGTGCTTCCGGGCCAATCTTTTTACGACAGTCATGACAAGAA TAAATGAGAGGATTTAAGGG
Downstream 100 bases:
>100_bases TCCCAATACGGATATACCGAGATGAAACACTATCTGAAATACTTGCCTGCGGTTCTGCCGCTTATAGCGGCAGCCTGCGC GGCGGCGCCGGAAACTCCGC
Product: penicillin amidase
Products: NA
Alternate protein names: Glutaryl-7-ACA acylase; 7-beta-(4-carboxybutanamido)cephalosporanic acid acylase; CAD; GL-7-ACA acylase; GCA; Glutaryl-7-ACA acylase subunit alpha; Glutaryl-7-ACA acylase subunit beta [H]
Number of amino acids: Translated: 714; Mature: 714
Protein sequence:
>714_residues MRHIRLFAAAFLVAAQVGLAACASDAGMALAPPEEAAPPAAEAEILWDTYGVPHIYGPDAESVFYGYGWAQVASHANTVL RLYGEARGKGAEYWGAEYEETTKWLVKNDVPGRAQLWYDAYSPEFRAKLDAFAEGMNAYAAANPEAIDPELRVVLPVSGV DVVAHAHRLMNFVYVASPGRVAGEGDPPDLSEQGSNTWAISGSKTASGNTMLLQNPHLPWGTGYFIYYEAHLNGPDFEIY GATQIGLPVIRFAFNQQMGISNTVNGMVGATTYELTLKDNGYLFDGEVLPFDVRETSYKLRQDDGTLLDVPVSVRSTVHG PVFEKADGKTIALRVAGLDRGGMLEQYFDMVTSDSHEEFQSAMSRLQVPTFNISYADRDGHIEYIFNGIAPKRPSGDIAF WQGLVPGDTSEYLWTDIHSFEDLPRVTDPETGFIQNSNDPPWEATYPVAYKPEDYPAYFAPRTPLSMRAQESIRMMTEAE DLTLDELVTLKLSANALMADRVLPDLLAAAASDPDSDMQAAVKVLSEWDRTFSSENRAGVLFEEWGKLFAGPRMTGQSGF AVPWSADDPINTPSGLKDPAASVELLRQAIASTKEKYGQIDPVYGDVSRFILEDVDVPGLGGYGNLGAFHVITWSDPNAD GVRTPNHGETWVAMIEFSTPVKAYGLMSYGNSRQPGTSHYSDQLNMLSEEKYRELWLQREQVEANLAERTPLNR
Sequences:
>Translated_714_residues MRHIRLFAAAFLVAAQVGLAACASDAGMALAPPEEAAPPAAEAEILWDTYGVPHIYGPDAESVFYGYGWAQVASHANTVL RLYGEARGKGAEYWGAEYEETTKWLVKNDVPGRAQLWYDAYSPEFRAKLDAFAEGMNAYAAANPEAIDPELRVVLPVSGV DVVAHAHRLMNFVYVASPGRVAGEGDPPDLSEQGSNTWAISGSKTASGNTMLLQNPHLPWGTGYFIYYEAHLNGPDFEIY GATQIGLPVIRFAFNQQMGISNTVNGMVGATTYELTLKDNGYLFDGEVLPFDVRETSYKLRQDDGTLLDVPVSVRSTVHG PVFEKADGKTIALRVAGLDRGGMLEQYFDMVTSDSHEEFQSAMSRLQVPTFNISYADRDGHIEYIFNGIAPKRPSGDIAF WQGLVPGDTSEYLWTDIHSFEDLPRVTDPETGFIQNSNDPPWEATYPVAYKPEDYPAYFAPRTPLSMRAQESIRMMTEAE DLTLDELVTLKLSANALMADRVLPDLLAAAASDPDSDMQAAVKVLSEWDRTFSSENRAGVLFEEWGKLFAGPRMTGQSGF AVPWSADDPINTPSGLKDPAASVELLRQAIASTKEKYGQIDPVYGDVSRFILEDVDVPGLGGYGNLGAFHVITWSDPNAD GVRTPNHGETWVAMIEFSTPVKAYGLMSYGNSRQPGTSHYSDQLNMLSEEKYRELWLQREQVEANLAERTPLNR >Mature_714_residues MRHIRLFAAAFLVAAQVGLAACASDAGMALAPPEEAAPPAAEAEILWDTYGVPHIYGPDAESVFYGYGWAQVASHANTVL RLYGEARGKGAEYWGAEYEETTKWLVKNDVPGRAQLWYDAYSPEFRAKLDAFAEGMNAYAAANPEAIDPELRVVLPVSGV DVVAHAHRLMNFVYVASPGRVAGEGDPPDLSEQGSNTWAISGSKTASGNTMLLQNPHLPWGTGYFIYYEAHLNGPDFEIY GATQIGLPVIRFAFNQQMGISNTVNGMVGATTYELTLKDNGYLFDGEVLPFDVRETSYKLRQDDGTLLDVPVSVRSTVHG PVFEKADGKTIALRVAGLDRGGMLEQYFDMVTSDSHEEFQSAMSRLQVPTFNISYADRDGHIEYIFNGIAPKRPSGDIAF WQGLVPGDTSEYLWTDIHSFEDLPRVTDPETGFIQNSNDPPWEATYPVAYKPEDYPAYFAPRTPLSMRAQESIRMMTEAE DLTLDELVTLKLSANALMADRVLPDLLAAAASDPDSDMQAAVKVLSEWDRTFSSENRAGVLFEEWGKLFAGPRMTGQSGF AVPWSADDPINTPSGLKDPAASVELLRQAIASTKEKYGQIDPVYGDVSRFILEDVDVPGLGGYGNLGAFHVITWSDPNAD GVRTPNHGETWVAMIEFSTPVKAYGLMSYGNSRQPGTSHYSDQLNMLSEEKYRELWLQREQVEANLAERTPLNR
Specific function: Catalyzes the deacylation of 7 beta-(4- carboxybutanamido)cephalosporanic acid (glutaryl-7- aminocephalosporanic acid or GL-7-ACA) to 7-aminocephalosporanic acid (7-ACA). Can not efficiently use cephalosporin C (CPC), penicillin G, or ampicillin as substr
COG id: COG2366
COG function: function code R; Protein related to penicillin acylase
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S45 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014395 - InterPro: IPR002692 [H]
Pfam domain/function: PF01804 Penicil_amidase [H]
EC number: =3.5.1.93 [H]
Molecular weight: Translated: 78539; Mature: 78539
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHIRLFAAAFLVAAQVGLAACASDAGMALAPPEEAAPPAAEAEILWDTYGVPHIYGPDA CCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHCCCCCCCCEEEEECCCCCEEECCCC ESVFYGYGWAQVASHANTVLRLYGEARGKGAEYWGAEYEETTKWLVKNDVPGRAQLWYDA CCEEEECCHHHHHHHHHHHHHEEHHHCCCCCCCCCCCHHHHHHHHEECCCCCCEEEEEEC YSPEFRAKLDAFAEGMNAYAAANPEAIDPELRVVLPVSGVDVVAHAHRLMNFVYVASPGR CCCHHHHHHHHHHHCCHHHHCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHEEEEECCCC VAGEGDPPDLSEQGSNTWAISGSKTASGNTMLLQNPHLPWGTGYFIYYEAHLNGPDFEIY CCCCCCCCCCHHCCCCEEEECCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCEEEE GATQIGLPVIRFAFNQQMGISNTVNGMVGATTYELTLKDNGYLFDGEVLPFDVRETSYKL ECHHHCHHHHHHHHCCCCCCCHHCCCCCCCEEEEEEECCCCEEECCCEEEECCCCCCEEE RQDDGTLLDVPVSVRSTVHGPVFEKADGKTIALRVAGLDRGGMLEQYFDMVTSDSHEEFQ ECCCCCEEEECHHHHHCCCCCCEECCCCCEEEEEEECCCCCCHHHHHHHHHCCCCHHHHH SAMSRLQVPTFNISYADRDGHIEYIFNGIAPKRPSGDIAFWQGLVPGDTSEYLWTDIHSF HHHHHHCCCEEEEEECCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHH EDLPRVTDPETGFIQNSNDPPWEATYPVAYKPEDYPAYFAPRTPLSMRAQESIRMMTEAE HCCCCCCCCCCCCEECCCCCCCCCCCCEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHC DLTLDELVTLKLSANALMADRVLPDLLAAAASDPDSDMQAAVKVLSEWDRTFSSENRAGV CCCHHHEEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC LFEEWGKLFAGPRMTGQSGFAVPWSADDPINTPSGLKDPAASVELLRQAIASTKEKYGQI HHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC DPVYGDVSRFILEDVDVPGLGGYGNLGAFHVITWSDPNADGVRTPNHGETWVAMIEFSTP CCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCC VKAYGLMSYGNSRQPGTSHYSDQLNMLSEEKYRELWLQREQVEANLAERTPLNR HHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MRHIRLFAAAFLVAAQVGLAACASDAGMALAPPEEAAPPAAEAEILWDTYGVPHIYGPDA CCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHCCCCCCCCEEEEECCCCCEEECCCC ESVFYGYGWAQVASHANTVLRLYGEARGKGAEYWGAEYEETTKWLVKNDVPGRAQLWYDA CCEEEECCHHHHHHHHHHHHHEEHHHCCCCCCCCCCCHHHHHHHHEECCCCCCEEEEEEC YSPEFRAKLDAFAEGMNAYAAANPEAIDPELRVVLPVSGVDVVAHAHRLMNFVYVASPGR CCCHHHHHHHHHHHCCHHHHCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHEEEEECCCC VAGEGDPPDLSEQGSNTWAISGSKTASGNTMLLQNPHLPWGTGYFIYYEAHLNGPDFEIY CCCCCCCCCCHHCCCCEEEECCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCEEEE GATQIGLPVIRFAFNQQMGISNTVNGMVGATTYELTLKDNGYLFDGEVLPFDVRETSYKL ECHHHCHHHHHHHHCCCCCCCHHCCCCCCCEEEEEEECCCCEEECCCEEEECCCCCCEEE RQDDGTLLDVPVSVRSTVHGPVFEKADGKTIALRVAGLDRGGMLEQYFDMVTSDSHEEFQ ECCCCCEEEECHHHHHCCCCCCEECCCCCEEEEEEECCCCCCHHHHHHHHHCCCCHHHHH SAMSRLQVPTFNISYADRDGHIEYIFNGIAPKRPSGDIAFWQGLVPGDTSEYLWTDIHSF HHHHHHCCCEEEEEECCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHH EDLPRVTDPETGFIQNSNDPPWEATYPVAYKPEDYPAYFAPRTPLSMRAQESIRMMTEAE HCCCCCCCCCCCCEECCCCCCCCCCCCEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHC DLTLDELVTLKLSANALMADRVLPDLLAAAASDPDSDMQAAVKVLSEWDRTFSSENRAGV CCCHHHEEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC LFEEWGKLFAGPRMTGQSGFAVPWSADDPINTPSGLKDPAASVELLRQAIASTKEKYGQI HHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC DPVYGDVSRFILEDVDVPGLGGYGNLGAFHVITWSDPNADGVRTPNHGETWVAMIEFSTP CCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCC VKAYGLMSYGNSRQPGTSHYSDQLNMLSEEKYRELWLQREQVEANLAERTPLNR HHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11080627 [H]